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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0316400 |
| Transcript ID | LotjaGi5g1v0316400.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Alpha/beta-Hydrolases superfamily protein; TAIR: AT2G03550.1 alpha/beta-Hydrolases superfamily protein; Swiss-Prot: sp|Q5NUF4|HIDM_GLYEC 2-hydroxyisoflavanone dehydratase; TrEMBL-Plants: tr|A0A0L9U054|A0A0L9U054_PHAAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0316400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:63427470..63429234) extracted from Lotus japonicus Gifu genome v1.2.
TAGATTCCGAAATTAATTTGTGATTTGTAGTGCAAAATACATGTAACACCCCACTTTTGAGTGAAAAAATGCTTCGGAAA CCTTATTTCCGAAATATTTCGGAAACTAAGTTTCGTGGGATGACATTTCTAATGAACGAGGTGTCAAATCTAATGATCTC TAGAAGAACCTGCACTTCACTTCACACTTCATTCTCATTCGGTAGAAAGCTATCTCCTTCCTTCCATTGAAATGGCTTCC ACAGCATCCAACACTAAACAGATCGTTACAGAGATTCCTACCTATCTCCGAGTCTTCAACGACGGCACCGTAGAACGCCC CCGTCAAGCACCGACAGTGCCACCGTCACTCCACGGCGACGAACGAGTCTCATCCAAAGACACCATCATCTCTCAAGACC CCACAATCTCCGCTCGCCTCTACCTTCCAAAACCAGCTCACTCCACTGAAAAACTCCCCATCTTGGTGTTCTTCCATGGC GGTGGATTCTTCTTTGAATCTGCTTTCTCCCAGCTCTACCATGAACACTTCAACTGCGTCGTTCCACAAACAAATCTTCT GGTTGTTTCCGTTGATTACAGGCTTGCCCCGGAGCACCCTCTCCCTGCTTGCTACCATGATTGCTGGGCTGCACTTCAAT GGGTTGCATCTCATGCTGCAGAAACAGAGCACCCCACCAAAACAGAGCCATGGTTGATTAACCATGGTGATTTCAGCAGA ATCTTCATTGGGGGTGACAGTGCTGGTGGTAATATTGTGCATAACATCGCTATGCGTGCTGGGTCTGAGGCTCTACCTTG TGATGTTAAGGTATTGGGAGCTGTTGTGTACCACCCTTACTTCTACAGCTCAGAGCCAATTGGTTCAGAACCTAATCCGA GGCCTGAGCAGGCCCTCCCCGCTGTGATTTGGGACTTGGTGTATCCAGCTGCGCCTGGTGGGATTGATAACCCCATGATC AATCCGGTGGGTCCAGGGGCACCTAGCTTGGCTGGACTTGGGTGTTCCAAGATGATTGTGTTTGTTGCTGGCGAGGATAA CATCAGGGACAGAGGGGTTTGGTATTATGATGCTGTGAAGAAGAGTGGGTGGCAGGGGAAAATTGATCTCTTTGAACAGG AGGGAGAGGATCATGTTTATCATATCTTCCATCCAGAATCTGAGAGTTCCAAGAAGTTGATCAAACGCTTGATTGAGTTT CTAGATGAGTAGAAGAACTGACTTCACTTCACTTGATTTGCTCTGTTGTTGTGGTATGCTGTGTTTGTTTTGCTGATAGT GCTTGTTTTCTTGTAATGTATTAAGGAGTCAGAGTGAAGTGTACTGTGATTCTGCTTCCTTTGTTCTGTGCTTTTTTTAT GCAATAAATTTTGCTTTACTGTATCCAAATTTCAACACAACCTCAACATGATAATTTCCAAAGTAAATGTTATTGCTATT TCTGTAAATTGCAGATTCTTATGATTGGGGCAGCTGTGCTAATTCCTGTGATGATAACTTGATTCATAAAGGATCTTACT GCCATAGATCTATAGTCTTGTCAATATAAGAAAAATGTGTAAAATTGTTACTATTAATTTCTTCTGACCTTTTGTTCACT TAGATAATTCTGGGTTGATATTCCATACTAAGGAACATTCACTAGTTTGATCAGTCATGTATGGTTGTACCGTTTCAAGT AGTACTTTTGTCATGTATGTGTTCTCTCTCTCTCTCAATTGATCTGAAATGTGGAGGATCTTTGGTCCTTTTGTTTTGGT CTTCA
CDS sequence (LotjaGi5g1v0316400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTTCCACAGCATCCAACACTAAACAGATCGTTACAGAGATTCCTACCTATCTCCGAGTCTTCAACGACGGCACCGT AGAACGCCCCCGTCAAGCACCGACAGTGCCACCGTCACTCCACGGCGACGAACGAGTCTCATCCAAAGACACCATCATCT CTCAAGACCCCACAATCTCCGCTCGCCTCTACCTTCCAAAACCAGCTCACTCCACTGAAAAACTCCCCATCTTGGTGTTC TTCCATGGCGGTGGATTCTTCTTTGAATCTGCTTTCTCCCAGCTCTACCATGAACACTTCAACTGCGTCGTTCCACAAAC AAATCTTCTGGTTGTTTCCGTTGATTACAGGCTTGCCCCGGAGCACCCTCTCCCTGCTTGCTACCATGATTGCTGGGCTG CACTTCAATGGGTTGCATCTCATGCTGCAGAAACAGAGCACCCCACCAAAACAGAGCCATGGTTGATTAACCATGGTGAT TTCAGCAGAATCTTCATTGGGGGTGACAGTGCTGGTGGTAATATTGTGCATAACATCGCTATGCGTGCTGGGTCTGAGGC TCTACCTTGTGATGTTAAGGTATTGGGAGCTGTTGTGTACCACCCTTACTTCTACAGCTCAGAGCCAATTGGTTCAGAAC CTAATCCGAGGCCTGAGCAGGCCCTCCCCGCTGTGATTTGGGACTTGGTGTATCCAGCTGCGCCTGGTGGGATTGATAAC CCCATGATCAATCCGGTGGGTCCAGGGGCACCTAGCTTGGCTGGACTTGGGTGTTCCAAGATGATTGTGTTTGTTGCTGG CGAGGATAACATCAGGGACAGAGGGGTTTGGTATTATGATGCTGTGAAGAAGAGTGGGTGGCAGGGGAAAATTGATCTCT TTGAACAGGAGGGAGAGGATCATGTTTATCATATCTTCCATCCAGAATCTGAGAGTTCCAAGAAGTTGATCAAACGCTTG ATTGAGTTTCTAGATGAGTAG
Protein sequence (LotjaGi5g1v0316400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MASTASNTKQIVTEIPTYLRVFNDGTVERPRQAPTVPPSLHGDERVSSKDTIISQDPTISARLYLPKPAHSTEKLPILVF FHGGGFFFESAFSQLYHEHFNCVVPQTNLLVVSVDYRLAPEHPLPACYHDCWAALQWVASHAAETEHPTKTEPWLINHGD FSRIFIGGDSAGGNIVHNIAMRAGSEALPCDVKVLGAVVYHPYFYSSEPIGSEPNPRPEQALPAVIWDLVYPAAPGGIDN PMINPVGPGAPSLAGLGCSKMIVFVAGEDNIRDRGVWYYDAVKKSGWQGKIDLFEQEGEDHVYHIFHPESESSKKLIKRL IEFLDE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 5 | 326 | 322 | 2.4E-71 | ||
| PANTHER | 7 | 325 | 319 | 9.7E-125 | – | |
| PANTHER | 7 | 325 | 319 | 9.7E-125 | – | |
| MobiDBLite | 28 | 48 | 21 | - | – | |
| SUPERFAMILY | 44 | 324 | 281 | 1.33E-53 | ||
| Pfam | 78 | 304 | 227 | 7.1E-44 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity | Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3. |
Expression pattern of LotjaGi5g1v0316400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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