Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

LotjaGi5g1v0320500.1

Overview

Field Value
Gene ID LotjaGi5g1v0320500
Transcript ID LotjaGi5g1v0320500.1
Related isoforms 1
Lotus japonicus genome version Gifu v1.2
Description NAD(P)H dehydrogenase (Quinone); TAIR: AT4G27270.1 Quinone reductase family protein; Swiss-Prot: sp|Q6NQE2|FQRL1_ARATH Probable NAD(P)H dehydrogenase (quinone) FQR1-like 1; TrEMBL-Plants: tr|A0A0R4J3V9|A0A0R4J3V9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0320500
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr5:63798551..63801576) extracted from Lotus japonicus Gifu genome v1.2.

CTTTAATTTTGATTAAAAAAAGCTAATAAGTTTGAAGAAGAAATGGACAACGGAATTCACGAATTGGACAAGAAGAATGG ACCTCTTGGTGGTGATAGTCACGAATTGAAGTAGGAGTGGTGGGCTTCATGTGATTGGTGTCGTGAAGAGGAAGGAGTGT GGGGGCTTGCAACTAGTGGTGGTTGTCAATCTACTTTTCCTCAATCTGATTATGGGGACCTAAATTTTTCCTGGGTTCAG ACTTCAAACACGACCCACCTTCTTCCCTTCTTTTTCTTCGATTTTGTATGATTTATGGGTTTGGGCTTTGGGGTTTGGAT CTGGGGTTTGTGGGGGGTTCTGGGTTGGTGGTGGCGTGGATTGGGAGTGGGTTCTGGGTGGTGGTGGTGGGAGTTTTGGG TTGGGAGTGGAATCTGGGTGGTGGCATGGAGAGAGGTTGGTGATGGAGGTGGATTGAGTTCTGGGTTGGTGATGAACAAG TCGGTGATGGTGGACTGGTGGTGGGTGGGTTGGGAGTGGGTTTGTTATTCTTATTTTCATTTTGGTGTTCTTGTTATTGA TATACGATGGCTTCTTTGGGTTCTGTTTCCTGCAAGTGGGTGATGTTGTAATCTCTGTTCTAAATTCTTATTTTCATTTT GGGTTCTTGTTATTGTTCATTCTTCTGATTCTTTGGTTATGTCTTGTTCTTCTTTGCAATTGCATCACAGTAGAATGCAA ATTGCATTGTTGTTCCCCTTCCTGGGTGGTGGTATGCAAATTCTTATTTTCATTTTTGTGGCTTGTTTCGTTTCTTTTCT TGCTGTAATAGTTCTTGTTCTGGTTTGGGGCACCTATTTGTGCCACCTCATTTATTGTTTTCCAGCATTTGATTTCAACT GGGGTTGGGAGATTGCAAGCATTTGCTTTATCTTCACACTACAAAGTATCAAATTTGATGCACTATTATAAAGATTTGAG TTTTATTTTCTGAGGATTAGAATTTATTTTCTGGGTTTTGTTGAAGATCATGAAGAAGGATTAGAGTTAAAAAATTTAGG ACTAAAATTAAAGATTTGATTAGGGATTGAAGTTAAATAAATTAAGTTTTTTTTTTTAATTTTTAGAATTTTAAATAATT TCTTTTTTTTAATTAATTAGTTTTTTTAATTTAAAAGAAAAATAAATTCCACGTCAGCTCATTAAACTGACGTGGACATG CCACATGGGCCACCGGAGCTCCGGCGTTGACCCAGAGCTCCGGAGGGATGAAAACCAAACTTTTTGGCAAAGGTTAGGGA CTAAAGCCCACCTTTGCTCCGGCGAGGGACGAAAACCATACATATGGTAAAGGTTAGGGACCAAAAACTTATTTAAGCCT TAAAAAAGGGGCAGCTTCTGTGGAAGGAGTAGAAGCAAAGCTATGGCAGGTTTGTAATGATTCTTTCTAGTTAACTCTCT ATCTGTTTTTTGGGTACCTTGTGCTCAATGGATCTTAATAAGGTTGGCTTCTAGTCAGCATAATATTCAAACAATCATTG ACACTGTATATGTTTAAGGCTAAGTTTGGATACCTATTGCCACTCGTGCAAACAACATATTAACACTTGCTCTAAGACCA AACTGAATGAAACTTTTCTTGTAGATTGGGATTAAAGTCTGTTCACATTGTACTGATATCCAAACACACACTACGACGCT CTAACCAAGTATATAAGTGTGCTTGGAACCACTTTTCATTTAGTCCAAAAATTACTTCTTCATGAGGCTAAAATATGTAG CTTTTTCCCTTAATGTGCACAGGATTATGTGTCACATTTGCAAACCAGCGTTGTTAATGGCGGATAGCGTAGATCGCTAT TGCGGCAAATAGCAGCAAATAGTAGTGAATAATGGAGTCGTGGTGAACCCCCCAGGGCGCTACGCTATAACGCTATTGTG CCGCTATGGCGCTATTAACAAGTCTGTTGCCAACCAACAGACACTTAGCCTCCACAATCCATTAGAGCTTGTAATTCAGA ACACTTGAAGTATTTTTCTTGCATTTACAATATTCTCATCCAAACAGGTACCTGAAATACTGTCTGAAGAAGTTCTTGCG AAGATGGGAGCACCACCGAAGAGTGATGTGCCAATTATCAAACCTCATGAGTTACTAGAAGCTGATGGTTTACTGCTTGG TTTCCCCACAAGATTTGGATCAATGGCTGGTCAGTTTAAAGTATTCATGGATGCAACTGGAGATCTATGGTGTAAACAAG CACTAGCAGGAAAGCCTGCAGGAATCTTTTACAGTACTGCTTGTCAAGGAGGTGGACAAGAGACTACTCCGTGAGTTACC AAATCTCACTCTTCTTTTTTCTTCCTAAACTTGCATCTTAAAATAAAGTGATTATTTGATATAGCCGTTTTTAGAGTTGT GTTTTTTGACATTTTTTTTTTCTTTTCAAAAGTTTACATTTTAAGTGCATGCTTGAAAATTACAAATCAATTATGAGGAG AAGATTTCTAGCATGTCAGAATCAACTTATTTCTTCAGAATCAATTTAAGCACTCAAAATTGCTTTCTGATTTAAAAATT CTGCAGCCTGACATCCATTACTCAGCTGGTTCACCATGGGATGATTTTTGTGCCCATTGGTTACACATTTGGTCCTGGGA TGTTTGAGATGGAGAATGTGAAGGGTGGATCCCCTTATGGTGCAGGTACCCTTGCTGGGGATGGCTCCAGACAGCCAACT GAGTTAGAACTGGCACAAGCTTTCCATCAGGGGAAGTACTTTGCTGGCATTGCAAAGAAGCTCAAGGGATCTCAGTGATT TTTATCCTCAATACATCTCCATTTTTAAGTTTAGCTAGCTTAATTGCACTTTTTGTCTTACATCTATCGCAATTGTAGGT CTCTCGTGTTTAAGAGAAATGGTTTTGGTCCTTGAAGTTTATAACATGTTATAATTAGGGCGTTCCGTCGGTTGTTATGA CTAATTACTAACGGAAATTGCTGAGGTGCATGGACTAGAGCTTCGTTGTTTTATGTGTAATGCCAC
Download Genomic Sequence

CDS sequence (LotjaGi5g1v0320500.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGGAGCACCACCGAAGAGTGATGTGCCAATTATCAAACCTCATGAGTTACTAGAAGCTGATGGTTTACTGCTTGGTTT CCCCACAAGATTTGGATCAATGGCTGGTCAGTTTAAAGTATTCATGGATGCAACTGGAGATCTATGGTGTAAACAAGCAC TAGCAGGAAAGCCTGCAGGAATCTTTTACAGTACTGCTTGTCAAGGAGGTGGACAAGAGACTACTCCCCTGACATCCATT ACTCAGCTGGTTCACCATGGGATGATTTTTGTGCCCATTGGTTACACATTTGGTCCTGGGATGTTTGAGATGGAGAATGT GAAGGGTGGATCCCCTTATGGTGCAGGTACCCTTGCTGGGGATGGCTCCAGACAGCCAACTGAGTTAGAACTGGCACAAG CTTTCCATCAGGGGAAGTACTTTGCTGGCATTGCAAAGAAGCTCAAGGGATCTCAGTGA
Download CDS Sequence

Protein sequence (LotjaGi5g1v0320500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MGAPPKSDVPIIKPHELLEADGLLLGFPTRFGSMAGQFKVFMDATGDLWCKQALAGKPAGIFYSTACQGGGQETTPLTSI TQLVHHGMIFVPIGYTFGPGMFEMENVKGGSPYGAGTLAGDGSRQPTELELAQAFHQGKYFAGIAKKLKGSQ
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR30546
1 151 151 1.9E-89 –
PANTHER
PTHR30546:SF26
1 151 151 1.9E-89 –
Gene3D
G3DSA:3.40.50.360
1 151 151 8.7E-55
IPR029039
SUPERFAMILY
SSF52218
5 149 145 2.64E-41
IPR029039
TIGRFAM
TIGR01755
8 148 141 2.8E-47
IPR010089
Pfam
PF03358
17 93 77 1.7E-8
IPR005025

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003955
Molecular function NAD(P)H dehydrogenase (quinone) activity Catalysis of the reaction: NAD(P)H + H+ + a quinone = NAD(P)+ + a hydroquinone.
Subterm of
GO:0010181
Molecular function FMN binding Interacting selectively and non-covalently with flavin mono nucleotide. Flavin mono nucleotide (FMN) is the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes.
Subterm of
GO:0016491
Molecular function Oxidoreductase activity Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
Subterm of

Genome browser

Expression data

Expression pattern

Expression pattern of LotjaGi5g1v0320500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…