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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0325700 |
| Transcript ID | LotjaGi5g1v0325700.1 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | TIP41-like protein; TAIR: AT4G34270.1 TIP41-like family protein; Swiss-Prot: sp|Q54MI6|TIPRL_DICDI TIP41-like protein; TrEMBL-Plants: tr|C6T769|C6T769_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi5g1v0325700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:64333364..64336705) extracted from Lotus japonicus Gifu genome v1.2.
ACAAAACAAAAAAACTCGAACACTCACTCTAACGTAAGACGATGGAATTTGCAGTCGACGAGAACGACCTGAAAGCCGCC GGCGCCGAGCTCTTCGAGGACGGTGGCCGGAAAGGCGTCCGCATCCATGGCTGGCTGATTGAGTCTCGGAGGCACTCCAT ACTCACCTCATCAAACGTCGAAGAGTGAGTATTCACTATTTCTGCATCACAATTAGCCCTAGTGGGATCCCGTTATTCCG AATTTGAAATTCTAAGATTTGGTTGTTATTGATTTTCTGCAATTGATTTGGTGGAATGAAAATCAGAGCATGTTTTGTTT TGATTGATGCAGGTGGGAACAGAAGCTTCACACGTCTCATTTACCAGAAATGGTTTTTGGAGAAAACACTTTGATTCTAA AGCATTTGAGTAGTGGCACCAAAATTCACTTCAATGCATTTGATGCTCTTCGTGGCTGGAAACAGGAAGCTTTGCCACCG GTTGAAGTTCCTGCAGCAGCTCAATGGAAGTTTAGATGGTAAGGTAGCCAAATTTTGATGCAAAATTGCATTTCTTTCAT GTTTTGCAATGGTTATAGATATGTATGACTTAAATCAAATGCTGTTACTATTCTAAGAAATTGCCTTATGATATAAATGA CCTTGCTTTTGCTGTTAGCCTCACATTGTTTTGGGAAAAATGTGCAGCAAGCCTTCTGAACAAGTGATACTAGACTACGA CTATACATTTACAACACCTTATTGTGGAAGTGGCACTATTGAGATTGATAAAGATCTGGTATGCATACAATGATTTGTGA ATAAAAATATGGAAAGTCCCGTTGATGTTTTTGCCTATGCTATTATTCAAGGTATTTAATTTTTGTGTGGTAGAATGCGA GCGAGATTTCTGAGGAAACTAGCAATCTTCATTGGGAAGACTGCAAGGAACAAATTGACTTGGTTTCATTGGCGTCGAAA GAGCCTATACTTTTCTATGATGAGGTGGGTAGTGAGTACCTTAGTGAATAAAGAAATTTTTCTTTGGTATTGTTCATGAA AAAGACACTCAAGTAAAAGAACGACAAAGCATATAACTAAGTAAATCCCCATCAGCTCTTTACTATTGTGCTCTATTTTA TAGAAATTGACCCTGCTATCTGCCCAAGTGAAATCTGCCATATATTAATATATTCCATTACCAAAATAGATGCATTCATG TTTAATTGTCTGAATGTCTGACCTATAGTAGATTGTCCATATTTCTCTTGATGGAATTTACTTTTAATCACAATGAATCC TCGTCATGAACAGGTGGTACTATATGAGGATGAACTTGCTGATAATGGAGTATCACTTCTTACCGTAAAAGTGGTAATCA CAAATTTGGTTTCTTCTGTTAATAGGGGGTTCATTTTTCCTTTTGCAAAATATGATTGCCAATGACTAATGATGTCACTT TTTGCTTTTATAGAGAGTCATGCCAAGTTCTTGGTTTCTTCTCTTGCGATTCTGGGTGAGTGGCTCCCTCTTCTGTCTTT ATGTACCAAATTAGTAAATTTCTTCATGAAGTTCATATAAGATGCTGAAGTTATTGCTAAGGATAATGCTCCTGACAGAC TTGGATATTAGTGTCAACTGTGTCAGCGTGTTTACTTGCTTGACACCATTTTCACTAAGCTTGTAAATTTTACTGGTTGA TCTGGTACTAATGCAGCTTAGAGTAGACGGAGTGTTGATTCGACTGAGAGATACACGTATGCACTGTGTATTTGGTGGAA GCACAAATCCCGTTATTCTTAGAGAGAGTTGCTGGAGAGAATCTACATTTCAAGCTTTGTCTGCGGTAAGTCTGTTACAT GCATCACTTGCTATGTTCTTTAAATAAATTCTGAATGGTATAAAAAGTAAGAAGAAAGTAGGTGGATGCTTGTCTACTGC TCTCTATATGCTTGTTAGTGTATCGTAATGATTTTAGGGATTGTTTTGGACCAACTGTTATTATGCATGGGTTTTGCTTG TTGTGTAAGATCAGGGATGTAGCAAGTGTTATTAGTTTCTGGGTTAGCACTACTGAAGCTTCTTCTATATCTGAAGTTCA AATAGGAATAACACAGTACTCTTAGGTAACAGGAATAGTTAAGACTTACTGTTATGAGAGAACCATTGATTTTCATTTGG CTTCAGATTGAGTTACTATAAGAACCAGTGCCAAAGAAGAAATGAAAGTTAATTTATTGAAGAAAATCTGCTAAAACTCC TGGATCTTTCGGAGGTCTGGGTCTCACCCTTGTTCCCATCTTGCAAATGATTTCCCACTCTCTCTAACTGTTATTTATAG TATTCACTCTCTCACTCTCTAACTAACTATGGGTACTTATCAATACTCCCATCTTGGGCATTCTCCTTGTCCCCAAGGTT AAGGGTGTAAATTTTAAAACAAATTTCACCAGGGTCCCATTAATGTTCTTCAATACCTACACATTTCACCAGGGTCCCAT TAATCTTGGTCAACCCTTGCTCTTTTTGTCTGGACCAAATCTCCTTGTTAGTGGATTGGGCTAGGGTCGATTTGTTCAGC AACTGTTTTCCTTTTATCCTTTTCTTGCTCGTAGTTTTCTTTGAAATTTGCATAGTTGCTTTGGCTGAGCAATCATATAC TATTGTACTCACAGTTTAGTATTGAAACATGTTTCTAATTATACTTGACTGTCTGTTTGATTGTTGCAGAAAGGGACCCC TTTTGATCCTGCTGTGTATAATGATCCAAGCATTATCAGCCAGAGGCTCCCCATTGTCAAGCAGATGACCCAAAATCTTG TAATTTCTCCTAAGTTATAGGGCTGTATATTCCCTTAATGCAGAAAGTGAAATTGATCAATTACTACTATCTTGTTCATA TTTTATTGAGACCTTATCCTGGTTGTTGACACCATCATTACTTCTTATGACTTAAACTATGTGATCGGAAGTGGGAGATT AAAATGAGGTGGAGGTACTGATAGAGTGTCTAAAAATTGAAGTCGAAACCAGAATTCTTCACATCCTGTAGTTTGTTGAG GAAACACTGTTTTTAAATCTACTGAAATGCCTTGGGCAGATATCACTTGCCACCCATTTACGTCGTTATTTCAGAGAAAA TCATGGCAATACATAGCAATGTCATCGATAGCTTTACCAAATTATGAGTATCTCGTACTCTTGAAACATTTACATTGTGT TCAATTCATGTTTAAAATTGTTAGAGATACATTTTTTTCCCCCACAAGCTATTTCAAGTAGGTTTTTTTGCTTCTCTTAA CCTGAAAATTTATTAGGTTTTCAAACACAATTTTCTTCTGCGTATATTTGACAATGGTCACC
CDS sequence (LotjaGi5g1v0325700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAATTTGCAGTCGACGAGAACGACCTGAAAGCCGCCGGCGCCGAGCTCTTCGAGGACGGTGGCCGGAAAGGCGTCCG CATCCATGGCTGGCTGATTGAGTCTCGGAGGCACTCCATACTCACCTCATCAAACGTCGAAGAGTGGGAACAGAAGCTTC ACACGTCTCATTTACCAGAAATGGTTTTTGGAGAAAACACTTTGATTCTAAAGCATTTGAGTAGTGGCACCAAAATTCAC TTCAATGCATTTGATGCTCTTCGTGGCTGGAAACAGGAAGCTTTGCCACCGGTTGAAGTTCCTGCAGCAGCTCAATGGAA GTTTAGATGCAAGCCTTCTGAACAAGTGATACTAGACTACGACTATACATTTACAACACCTTATTGTGGAAGTGGCACTA TTGAGATTGATAAAGATCTGAATGCGAGCGAGATTTCTGAGGAAACTAGCAATCTTCATTGGGAAGACTGCAAGGAACAA ATTGACTTGGTTTCATTGGCGTCGAAAGAGCCTATACTTTTCTATGATGAGGTGGTACTATATGAGGATGAACTTGCTGA TAATGGAGTATCACTTCTTACCGTAAAAGTGAGAGTCATGCCAAGTTCTTGGTTTCTTCTCTTGCGATTCTGGCTTAGAG TAGACGGAGTGTTGATTCGACTGAGAGATACACGTATGCACTGTGTATTTGGTGGAAGCACAAATCCCGTTATTCTTAGA GAGAGTTGCTGGAGAGAATCTACATTTCAAGCTTTGTCTGCGAAAGGGACCCCTTTTGATCCTGCTGTGTATAATGATCC AAGCATTATCAGCCAGAGGCTCCCCATTGTCAAGCAGATGACCCAAAATCTTGTAATTTCTCCTAAGTTATAG
Protein sequence (LotjaGi5g1v0325700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEFAVDENDLKAAGAELFEDGGRKGVRIHGWLIESRRHSILTSSNVEEWEQKLHTSHLPEMVFGENTLILKHLSSGTKIH FNAFDALRGWKQEALPPVEVPAAAQWKFRCKPSEQVILDYDYTFTTPYCGSGTIEIDKDLNASEISEETSNLHWEDCKEQ IDLVSLASKEPILFYDEVVLYEDELADNGVSLLTVKVRVMPSSWFLLLRFWLRVDGVLIRLRDTRMHCVFGGSTNPVILR ESCWRESTFQALSAKGTPFDPAVYNDPSIISQRLPIVKQMTQNLVISPKL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 19 | 285 | 267 | 6.6E-102 | – | |
| PANTHER | 19 | 285 | 267 | 6.6E-102 | ||
| Pfam | 61 | 252 | 192 | 2.6E-61 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Regulation of phosphoprotein phosphatase activity | Any process that modulates the frequency, rate or extent of phosphoprotein phosphatase activity, the catalysis of the hydrolysis of phosphate from a phosphoprotein. |
Expression pattern of LotjaGi5g1v0325700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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