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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0325900 |
| Transcript ID | LotjaGi5g1v0325900.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Alpha-L-fucosidase 2; TAIR: AT4G34260.1 1,2-alpha-L-fucosidase; Swiss-Prot: sp|Q8L7W8|FUCO2_ARATH Alpha-L-fucosidase 2; TrEMBL-Plants: tr|A0A151U7Q5|A0A151U7Q5_CAJCA Alpha-L-fucosidase 2; Found in the gene: LotjaGi5g1v0325900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:64346843..64353065) extracted from Lotus japonicus Gifu genome v1.2.
TGAAGAAACGCGTGTCCTTCAATTGAAAACAATATGAGTTAGCTGCTTCATTCACTACACTACACTACACTACCAGCTAA CAGAGACAGCTTTCAGCTTCTACTACTCCACCGACTCCTTCACTCTCTCTTCCTCCTTCATCTCATTCCCCTTTCTGCAA TGGAAGATGCGGAATGGGTTCTGGTGCAGCGCCCCCCACAGAAAGACTGGTGGAACCCGACTTCAGCCAATGCAGTGGGT GATGGACCTTCTAGACCCTTGAAGGTTACTTTTTCTGGGCCTGCAAAGCACTGGACCGATGCCATCCCCATTGGCAATGG CCATCTTGGAGCCATGGTTTGGGGTGGCGTGCAATCGGAAATTCTCCAGCTCAATGGTAATCAAACCCCTCAAAAAACTT CCAATCTGTTACATATTTAGTTTAGTTCATGTTGCTTTGATCCAAAATGGCAATTGATTTGAGGCTTAGAAGCTTAATAC ACTCTGTCTTTGAGCTATATATAGTTCCTGCTATTTGTTACCCGAGATTCTGATTAATATTTTGAGCATCAGAAATGTTA GACTGTGCTATTGCTTGATTTGTTGTTATACCTGATTTGGGACAATTACCCTAAGTGACACACAGCATGTAGCTACTTTG ATGGGAAGGCTGCATTGTGTCCTGAATTTACCATCAATTATTTGTTGGATCCAATGGGGATCAGGGAGAAAAATATGGTC TGAGAGTTCAATGTTTTCATATGGTGGGCAATAATACTATAGGCATTTCTAGTTGTAAAGGCATTTAGGATAATAGGCAT GAAGTCATGCTGCATTGTGCGTAGCGAAGCCAAATTAGCTGTGTCTTTCTCGTTCGTTATGCATGCTAATGTGAACATTC AAAATTATTTTGTAGAGGACACACTTTGGACTGGGATTCCTGGCGATTACACAAAAAAAACTGCTCCTGAAGCGCTGGCT GAAGTTCGAAAACTTGTTGATGATAGAAAATACTCTGAAGCTACGGCAGCAGCTGTCAAGTTGTCAGGAGATCCTTCTGA TGTATGTCATATCCTTCCTTTATTTATGAGAAGCAATGCAAATTTTTATTTATTAGACAACCCACCAACATGTATATAAA CATAGGAATTGGAGTAGGAGGATTTTTCTTTAATAATATATGTCACATGTTTTTATTAAACTAGTATCATCATTCATCGT TTCTCCCCCCCCCCCCCCCCCCCCCCCCTCCTTTTCCAGAAAAATCCTCACCCATTTTGATGTTGTTGGTGCATGAGTTA AGGAAGCTTTATGCAATGTTGGCAGTCATGGCTAACTCTTATTTCTTGATATGAAGGTATACCAACTTATTGGGGACATC AAGTTGGAATTTGATGATTCTCATCTTAAATATTCAGAAGAGTCTTATCGTAGAGAGCTCGATTTGGATAATGCAACAGT GAAAGTAAAATATTCTGTTGGTGATGTAGAATTTTCCAGAGAACATTTTGCTTCTAATCCAGATCAAGTGATAGTGGCAA GGTTTTCTGCAAGCAAGTCAGCGTCATTATCATTTACAGTGTCTTTGGATAGCAAATTACATGACAATTTACGGGTAAAT GGCCAAAATCAGATAATAATGGAAGGAAGTTGTCCTGGTTCTAGGATCAGGCCAAAAGTGAATTCTAATGACCCTCCAAA AGGAATTCAATTTTCTGCAGTTCTTGATATACAAATTAGTAATGACAAAGGGGTTATACATGTCTTGGATGATAAGAAGC TAAGAGTTGAAGGTTCAGATTGGGCTATTTTACTTCTGACAGCTTCTTCTTCTTTTGATGGCCCATTTACTAAGCCTGAA GACTCTAAGAAAGATCCCACATCTGAGTCCCTTAGTAAGATGAAGTCTGTGAAAAGTGTTTCATATGCCGATCTTTATGC ACGTCACTTGGATGACTATCAGAATCTATTTCATCGTGTCTCATTGCAACTCTCTAAAAGCTCAAAGAATGTTTTAGGAA AATCTGTTTTGGACGAAAGGAAATTGGTTTCCCCTCAAACTAACATCTCTCAAATGGGAGGTGATGAAACCATTCCAACT TCAGCAAGAGTCAAATCATTTCAAACTGACGAAGATCCTTCCTTTGTGGAGCTTTTGTTTCAATATGGTCGATATCTACT AATTTCTTGTTCACGTCCTGGAACTCAGCCGGCAAACTTACAGGGTATATGGAACAAAGATCTCGAGCCTGCATGGGAGT ATGTTTTCCTTTTCCCTTTTTCCTTCTTCCCTCTCATAGCAATAAATTGATAAATGAATGAAAAAAAGGTGCAACTGTAT GCTATATAGTATCAAGATTATATAGTGGCTTAGAGTTTTAGATGGATATGGATTATCAAATATATCTAGAAGCAACTTCA TGAATGATTTATTAAAGTTTGTAATTTGTATCATTTCTTTTGTCATCCAGTGGTGCTCCTCACACTAATATTAATCTTCA AATGAATTATTGGCCGTCTCTGTCTTGCAACCTACACGAATGCCAAGAGCCGTTATTTGATTTCATTTACTCTTTGTCAG TCAATGGTAGTAAAACTGCAAAGGTATTGTCTTTTTCACTCTCCCTTTCTTATTATTCTTGGCATTCTATTAAAGAAAGG GATCCTTTATGCTTGTTAGCTAACAGTGACTTTGTACACTTGTCCCTCCCCTTTGCCCACAAATCTATAGCAACGCAAAA AAAATGAAAGGAAAAAAAAATAGTTTCAACTTTCAAGTATTGCCATTTTCACAGCATCTGGTCACAATGTCATCAATTTT ATATATTCTATCCAGAATTTCATTTGATCCAGCACACAGGTGAACTATGAAGCAAATGGTTGGGTTGTGCATCAAGTTTC TGACATATGGGCCAAAACATCCCCAGATCGAGGTGAGGCTGTTTGGGCTTTATGGCCAATGGGTGGAGCTTGGCTTTGTT GCCATCTATGGGAGCATTATACTTATACAATGGACAAAGTAAGTTCTGGTTTTTCAATAAATTATCTAAACCTTTATTTA AAATATTGACTTAAAATTGGTCTTGTGTAAATGGCTGTGTTGGGGATTTAACAATTTCAAAATTCCCCAAGTTATTTAAT TTGCAGATCAATAACCATCATTTTTTATCTGACTGATCTGCTTCTATTTTCATGGCATTACAATGAGTTGAACTCAATTT GTTGAAACATGCTATTCAAACACATTTTTGTGACTGGGCACTTTGACCTGTTTTGGCTTATTATGTTTTACATTAACAAT GAGATTTCAAACTGATACTTATCCAAATAATTCTTTGTTTTTCCTTCTAGGGAACAAGAAGCTGTATACATATTATGAAC TTCCATTGAAATTACAAAACATTTTCAGATTCATGTTTTATTTTATGGGTGTATAGATGCAACTATTTACTGCTGTATTA CCATTACTTTTATAGGCTACAACTCATAAATATAACCCAGTTATATGATACAAACTACTGCAGGATGGATAACCTAATAT ATTATGATGGCATGACCGCATGGGCATCTATGTATTTTGTATTTGCAATCATAATTGATGCTTAATTTTCTTTAATATTA GGGTTTTCTCAAAAATAAAGCATATCCTTTGTTGGAAGGATGTACATCATTTTTGCTGGATTGGTTGATTCAAGGCCATG ATGGATTGTTGGAAACTAACCCATCAACTTCACCAGAGCACATGTTCACTGCACCAGATCAAAAGCCTGCTAGCGTAAGC TACTCATCAACCATGGACATTTCAATCATAAAAGAAGTATTCTCCATAATCATATCTGCTGCTGAGGTAAAACTGATCTT AGTGCTCAAAATTAGTTTCCTATTATCCTAATTTTACCTTGGCCACTAAGTTTCTCAAAAATAGGTTCTGGGAAGACAAG ATGATGCTATTATCAAAAGAGTTACCGAGTCTCTGCCTAAGCTCCCTCCAACAAAAATCTCTAGGGATGGATCCATTATG GAATGGGTATGAAATTATATTTGATATTTGCATTCCTTCCTCCATCTCTCAAGTGTCAATTTGGCCAGTTTTTGTCACCT GATGTCTTGCTTTGATTCGCAACGACAGAGTTAGCAATTCCATGTTAACTTTAACACCTTATTTATTTGGCAGGCAGAAG ATTTTCAGGACCCAGATATACATCATAGACATGTTTCCCATCTGTTTGGCCTGTTTCCAGGACACACAATCAGTCTTGAG AAAACTCCAGACCTTTGTAAAGCTGTGGATTATAGTCTAATTAAAAGAGGTATTTTATGAGAACTTTAGATGATGAATTC TTTTCAGTGATAGTAGTTTTTTTCCTCTTTGAATATGCTTGGCTATTACTTTTTCTGTTGAAAATCCGTATCTTAGATGA ACTAAAACAGCCGCATGTAATTATTAATATCTGATTAGAATATAGTTATATAAGATGTAGTATAATAAACGATGTGTTAG TTGCTTTTGAATAATTAAAGGGATTTTATGAGTTTAGACTTGAGTACACCTTCACAATTCACTGTCTGCTGTCTTAAAGC TTCTAGGGGGTTTAGAAGACTGTTATATTGGTACTCCTGCAATTATATATCTCATTACAGACTACAATATTTATGCTCAA CCTTGTATATATGACGAAAAGTTGTATGTTTTTAATATAGAATGCTAGAAATAATATAATTCAACATTAATTGCCATTGT TGCATGGTATTACAGGGGATGAAGGTCCAGGGTGGTCAACAACTTGGAAAGCTTCATTATGGGCTCACCTTCACAACAGT GAGCATGCATATCGCATGATAAAGCACTTGATCGTTTTGGTAGACCCTGAACATGAAAGTGATTACGAAGGAGGACTTTA CAGTAACCTGTTCACAACACATCCCCCTTTCCAGATTGATGCAAACTTTGGGTAAGCCCCATCTTTATGAATGAACTGTT GAACGTTTGTGCATCTTGTCAATTTCACTTTCATCATATGAGCTGAAGTATTTTTAAGGCTTCAAATTTTGTTCATGAAT GTCAATGTTTTCTGATAGACCTTGTGTGCTCATTGAGTCAGTGTGTTTTCCCCTGATCTGAACATTTTGCAATTATCATA TCTGATTGAATTTGTTATTGCATCTTGTCCGCATTCTGACTTCAAAACTTGAGTTGGGTCTAATCTACCCTAAAAGCTAG ATCATGTGTGGGGATTTCTCTACCCTTTATAAGGACTATTTTGGTCATATCTTTAGTCAATGTGAGACCTGAACTTATAC ATCATAGTTCTTTAGTTCTTAATTTAGTTCAAACCGGTGGAGAAATTCATATGATTCTAAATTTATGATTGGAACCATGA CATCATAGTTATTTTTTATTTTGAACTTCACCCACCTGTTTGGGAGATGTAACCTTCAAAGTTGTATGTAGAAACCTTGG CCTATGACTAAAAGTTCTGTCTATTAAAATTTGTAAATGTTGAAAATACACACACTGAAAATTGGTAATGTTACCCGATA TCTGAATCAGTTTAGCTGAGGGAAAACAATGTTTGTTGTCAGGTTTTCAACAGCAATTGCAGAAATGCTTGTTCAAAGCA CACTGAAGGACCTCTACTTGCTTCCCGCACTACCTCGCGGAAAATGGGCAAATGGTTGTGTAAAAGGATTAAAAGCACGT GGTGGCGTGACAGTCAACATCTGCTGGAAAGAAGGAGATCTGCGTGAAGTGGGGCTTTGGTCAGAAAACCAGAATTCCCG AGTGAGACTACATTATAGAGGAACCATGGTCTTAGCAAATTTATCACCTGGCAGAGTTTACTCATATAATAACCAGTTGA AGTGTGTGAAGACATACTCACTTAGCCAACTGAGTCTTTGAAATTTTCTTGTCTGAATTTTCCTACAGAATAACATACAT TGCTTTTTGCCTCCTGTCATTGGACTCAATGTTGAAGTTTGATAGTTTTCTCTTCTTTTTCTTTATGATTATTCTTCGAC AGTTATTTAGCCACAGAAGATGTAATTTAACTGAGAAGTTTCTTTCATTACTTTTGTTGTGCGGTTGAGGGTGTAAAACC TGGTAATATCACTGTCATTTTGTTATTAACTTCACACGACACAAATGGATGATGAATGTTTTCTGGAGCAACAAGATGTT AAGAAAGGTGGTCTAGGCTTTTCAAATTAGAAAATTGTATGGACGGAGATTCAGGGTTAAGAA
CDS sequence (LotjaGi5g1v0325900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAAGATGCGGAATGGGTTCTGGTGCAGCGCCCCCCACAGAAAGACTGGTGGAACCCGACTTCAGCCAATGCAGTGGG TGATGGACCTTCTAGACCCTTGAAGGTTACTTTTTCTGGGCCTGCAAAGCACTGGACCGATGCCATCCCCATTGGCAATG GCCATCTTGGAGCCATGGTTTGGGGTGGCGTGCAATCGGAAATTCTCCAGCTCAATGAGGACACACTTTGGACTGGGATT CCTGGCGATTACACAAAAAAAACTGCTCCTGAAGCGCTGGCTGAAGTTCGAAAACTTGTTGATGATAGAAAATACTCTGA AGCTACGGCAGCAGCTGTCAAGTTGTCAGGAGATCCTTCTGATGTATACCAACTTATTGGGGACATCAAGTTGGAATTTG ATGATTCTCATCTTAAATATTCAGAAGAGTCTTATCGTAGAGAGCTCGATTTGGATAATGCAACAGTGAAAGTAAAATAT TCTGTTGGTGATGTAGAATTTTCCAGAGAACATTTTGCTTCTAATCCAGATCAAGTGATAGTGGCAAGGTTTTCTGCAAG CAAGTCAGCGTCATTATCATTTACAGTGTCTTTGGATAGCAAATTACATGACAATTTACGGGTAAATGGCCAAAATCAGA TAATAATGGAAGGAAGTTGTCCTGGTTCTAGGATCAGGCCAAAAGTGAATTCTAATGACCCTCCAAAAGGAATTCAATTT TCTGCAGTTCTTGATATACAAATTAGTAATGACAAAGGGGTTATACATGTCTTGGATGATAAGAAGCTAAGAGTTGAAGG TTCAGATTGGGCTATTTTACTTCTGACAGCTTCTTCTTCTTTTGATGGCCCATTTACTAAGCCTGAAGACTCTAAGAAAG ATCCCACATCTGAGTCCCTTAGTAAGATGAAGTCTGTGAAAAGTGTTTCATATGCCGATCTTTATGCACGTCACTTGGAT GACTATCAGAATCTATTTCATCGTGTCTCATTGCAACTCTCTAAAAGCTCAAAGAATGTTTTAGGAAAATCTGTTTTGGA CGAAAGGAAATTGGTTTCCCCTCAAACTAACATCTCTCAAATGGGAGGTGATGAAACCATTCCAACTTCAGCAAGAGTCA AATCATTTCAAACTGACGAAGATCCTTCCTTTGTGGAGCTTTTGTTTCAATATGGTCGATATCTACTAATTTCTTGTTCA CGTCCTGGAACTCAGCCGGCAAACTTACAGGGTATATGGAACAAAGATCTCGAGCCTGCATGGGATGGTGCTCCTCACAC TAATATTAATCTTCAAATGAATTATTGGCCGTCTCTGTCTTGCAACCTACACGAATGCCAAGAGCCGTTATTTGATTTCA TTTACTCTTTGTCAGTCAATGGTAGTAAAACTGCAAAGGTGAACTATGAAGCAAATGGTTGGGTTGTGCATCAAGTTTCT GACATATGGGCCAAAACATCCCCAGATCGAGGTGAGGCTGTTTGGGCTTTATGGCCAATGGGTGGAGCTTGGCTTTGTTG CCATCTATGGGAGCATTATACTTATACAATGGACAAAGGTTTTCTCAAAAATAAAGCATATCCTTTGTTGGAAGGATGTA CATCATTTTTGCTGGATTGGTTGATTCAAGGCCATGATGGATTGTTGGAAACTAACCCATCAACTTCACCAGAGCACATG TTCACTGCACCAGATCAAAAGCCTGCTAGCGTAAGCTACTCATCAACCATGGACATTTCAATCATAAAAGAAGTATTCTC CATAATCATATCTGCTGCTGAGGTTCTGGGAAGACAAGATGATGCTATTATCAAAAGAGTTACCGAGTCTCTGCCTAAGC TCCCTCCAACAAAAATCTCTAGGGATGGATCCATTATGGAATGGGCAGAAGATTTTCAGGACCCAGATATACATCATAGA CATGTTTCCCATCTGTTTGGCCTGTTTCCAGGACACACAATCAGTCTTGAGAAAACTCCAGACCTTTGTAAAGCTGTGGA TTATAGTCTAATTAAAAGAGGGGATGAAGGTCCAGGGTGGTCAACAACTTGGAAAGCTTCATTATGGGCTCACCTTCACA ACAGTGAGCATGCATATCGCATGATAAAGCACTTGATCGTTTTGGTAGACCCTGAACATGAAAGTGATTACGAAGGAGGA CTTTACAGTAACCTGTTCACAACACATCCCCCTTTCCAGATTGATGCAAACTTTGGGTTTTCAACAGCAATTGCAGAAAT GCTTGTTCAAAGCACACTGAAGGACCTCTACTTGCTTCCCGCACTACCTCGCGGAAAATGGGCAAATGGTTGTGTAAAAG GATTAAAAGCACGTGGTGGCGTGACAGTCAACATCTGCTGGAAAGAAGGAGATCTGCGTGAAGTGGGGCTTTGGTCAGAA AACCAGAATTCCCGAGTGAGACTACATTATAGAGGAACCATGGTCTTAGCAAATTTATCACCTGGCAGAGTTTACTCATA TAATAACCAGTTGAAGTGTGTGAAGACATACTCACTTAGCCAACTGAGTCTTTGA
Protein sequence (LotjaGi5g1v0325900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEDAEWVLVQRPPQKDWWNPTSANAVGDGPSRPLKVTFSGPAKHWTDAIPIGNGHLGAMVWGGVQSEILQLNEDTLWTGI PGDYTKKTAPEALAEVRKLVDDRKYSEATAAAVKLSGDPSDVYQLIGDIKLEFDDSHLKYSEESYRRELDLDNATVKVKY SVGDVEFSREHFASNPDQVIVARFSASKSASLSFTVSLDSKLHDNLRVNGQNQIIMEGSCPGSRIRPKVNSNDPPKGIQF SAVLDIQISNDKGVIHVLDDKKLRVEGSDWAILLLTASSSFDGPFTKPEDSKKDPTSESLSKMKSVKSVSYADLYARHLD DYQNLFHRVSLQLSKSSKNVLGKSVLDERKLVSPQTNISQMGGDETIPTSARVKSFQTDEDPSFVELLFQYGRYLLISCS RPGTQPANLQGIWNKDLEPAWDGAPHTNINLQMNYWPSLSCNLHECQEPLFDFIYSLSVNGSKTAKVNYEANGWVVHQVS DIWAKTSPDRGEAVWALWPMGGAWLCCHLWEHYTYTMDKGFLKNKAYPLLEGCTSFLLDWLIQGHDGLLETNPSTSPEHM FTAPDQKPASVSYSSTMDISIIKEVFSIIISAAEVLGRQDDAIIKRVTESLPKLPPTKISRDGSIMEWAEDFQDPDIHHR HVSHLFGLFPGHTISLEKTPDLCKAVDYSLIKRGDEGPGWSTTWKASLWAHLHNSEHAYRMIKHLIVLVDPEHESDYEGG LYSNLFTTHPPFQIDANFGFSTAIAEMLVQSTLKDLYLLPALPRGKWANGCVKGLKARGGVTVNICWKEGDLREVGLWSE NQNSRVRLHYRGTMVLANLSPGRVYSYNNQLKCVKTYSLSQLSL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 840 | 840 | 0.0 | – | |
| PANTHER | 1 | 840 | 840 | 0.0 | – | |
| PIRSF | 17 | 842 | 826 | 0.0 | ||
| Pfam | 38 | 283 | 246 | 2.2E-63 | ||
| Gene3D | 45 | 798 | 754 | 1.4E-210 | ||
| Gene3D | 49 | 328 | 280 | 1.4E-210 | – | |
| SUPERFAMILY | 293 | 801 | 509 | 3.4E-83 | ||
| Gene3D | 329 | 808 | 480 | 1.4E-210 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Molecular function | Alpha-L-fucosidase activity | Catalysis of the reaction: an alpha-L-fucoside + H2O = an alcohol + L-fucose. |
Expression pattern of LotjaGi5g1v0325900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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