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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0338400 |
| Transcript ID | LotjaGi5g1v0338400.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | membrane-associated kinase regulator; TAIR: AT1G68330.1 membrane-associated kinase regulator; Swiss-Prot: sp|Q3ZEJ6|SPA33_BOVIN Serpin A3-3; TrEMBL-Plants: tr|A0A151U744|A0A151U744_CAJCA Uncharacterized protein; Found in the gene: LotjaGi5g1v0338400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:65543520..65545432) extracted from Lotus japonicus Gifu genome v1.2.
AAACACCTCTCTCTCTCTCTCTCTCTCTCTCTCATGACACTCCACCAGATGGCAATGGTGTGATTCTGTGGTAACCCCCA AAAGAGTTATCCTTTTATAGCCTTTCGGTGATTGGTTTCAACTGTTTTCGTCTCTCTTTACTCTGCTTTTCCTTTACCCT TTCATAAGCACATTGTAAAGAAAAGGATCTAGTGACTCCAATCCAATCCATCCTCAATGCTAATCTTCCTCACCCTGCAT AATTGTTCCTTCAATTTTGGGATATGCACCTTACTCACACCCAACACAAAACACAACAAAAACGCTTAAAGCTGCCATTT CTGACTTCTCAACCCCATAATTCCCCACAAACAGAGCACAAACACCTACTTCTCCCACATCTTTCTCTCTCTGTCTCTTT CACTTCCTTTGACTCCTAACCCATCACCATTTCAACAAACCCATCACTCCAACCTCATACATTTTGAAACTTTTCGCCGC TACCCTCAAATCCAACAACATTTTCAGACACACACTCTCTCTCTCTCTCTCTGTGCCTCTCTGTTTTCTAGAAACAGAGG AAACAGAGTAAAACAGAGGAAAACAGAGTTCCCCTGTTCTGAAAAAAAGCTATGGCAGTAGAAGTGTGCACTGAGATATC CAGCACAGGAATCAGCCCTCGCATCTCATTCTCACACGATCTGAAGAACACAGATGGTGCAGTCCCCGTTGAGGATCGTC ACCGTCGATCAGATTTGTGCCTCTTGGATTCCAGTTCCAGTTCTGATTTCGTTTTCTCCATCACCAGTGGATTAGCTCAA AAACTCTCTTCAGCTGATGAACTCTTCTCCAATGGCAAGATTGTGCCAATGGAATTCAAGAGAGTAGTTTCCAATGCTCC ACGTAAACCCCATCAACCTTCTTGTTCTCGCTCTCGCACTGCAAGCACTAGATGTACGGAAACAAAGAGGCTCAAAGAGT TCTTGTCTGCAGACTCTGATGATGCAGAGAATGAAGATGAAAAGCCATCATCCAAGTATTTCTGGCAATTCAAGCGAAGT AGCAGTTTGAACTTCGATCCGGGTCGTGGGAATAGCTTCATTCGCTCTCTGCAATTCCTATCAAGGAGCAACTCAACTGG TTCAGCACCAAATCCAAAGGACACAGAGCTTCCAAGAGAAACCCAGAAGCAGAGGTTGCAGAAACAGTCCTCTGTTTCAA GCAGAAGGTCATCATCATCCTCTTCAAGTTCAAGTGCATATTATTTCTACAATTCATCTCATAAGCCTTCATTAAAGAAA AACTTTGGATCTTCTTCTGGTAATGGTGTTAGAATTAGTCCTGTTTTGAATCTACCACAATCATATATTCCCAAAGCTAG TGCAAGATTCTTTGGATTTGGTTCATTGTTCTGCAATGGAAAGATTAAAAGAAAGAAGAAATAAAAGTTTCATTTTCATT TTATTCTTAAAATTTCTCATTCATGGTCAAATCTTGATGGCAGATGGGTTCAGCACCCTGTCTATGTTTTTTGTTCATGT ACTATCATGTGAGCCTAACTGTTAATTCAGGGGAAATAATAGGAACAAGGAGATTATATTCTTAGAAAATTATTATAGGG GGTGTGAATTGTAATTTAGGAAAATGAAAACTACAGTTGAGAGATGGAAATGGACAAAAATAAATCATGCATATCACTAT GTTTAGAGCCAAGGAGACAAATAAACAAGGAATCCTTCTTTGATGGTCTCTCCCATGCCCTTTTTTAAAATTTTCTGTTG ATAATTACATGTGGCTACCTTTTGTACATTTCAACACTGATTGAAGACTTGTGTTAAGGGATTCTATTTTTCTTTTTGTA TGCTGATAAATATTTATAAACCAACTGTTCAATGGGCCACCATAATTTCTTTCTTTTTGTTTTATTGTGCCAT
CDS sequence (LotjaGi5g1v0338400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCAGTAGAAGTGTGCACTGAGATATCCAGCACAGGAATCAGCCCTCGCATCTCATTCTCACACGATCTGAAGAACAC AGATGGTGCAGTCCCCGTTGAGGATCGTCACCGTCGATCAGATTTGTGCCTCTTGGATTCCAGTTCCAGTTCTGATTTCG TTTTCTCCATCACCAGTGGATTAGCTCAAAAACTCTCTTCAGCTGATGAACTCTTCTCCAATGGCAAGATTGTGCCAATG GAATTCAAGAGAGTAGTTTCCAATGCTCCACGTAAACCCCATCAACCTTCTTGTTCTCGCTCTCGCACTGCAAGCACTAG ATGTACGGAAACAAAGAGGCTCAAAGAGTTCTTGTCTGCAGACTCTGATGATGCAGAGAATGAAGATGAAAAGCCATCAT CCAAGTATTTCTGGCAATTCAAGCGAAGTAGCAGTTTGAACTTCGATCCGGGTCGTGGGAATAGCTTCATTCGCTCTCTG CAATTCCTATCAAGGAGCAACTCAACTGGTTCAGCACCAAATCCAAAGGACACAGAGCTTCCAAGAGAAACCCAGAAGCA GAGGTTGCAGAAACAGTCCTCTGTTTCAAGCAGAAGGTCATCATCATCCTCTTCAAGTTCAAGTGCATATTATTTCTACA ATTCATCTCATAAGCCTTCATTAAAGAAAAACTTTGGATCTTCTTCTGGTAATGGTGTTAGAATTAGTCCTGTTTTGAAT CTACCACAATCATATATTCCCAAAGCTAGTGCAAGATTCTTTGGATTTGGTTCATTGTTCTGCAATGGAAAGATTAAAAG AAAGAAGAAATAA
Protein sequence (LotjaGi5g1v0338400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAVEVCTEISSTGISPRISFSHDLKNTDGAVPVEDRHRRSDLCLLDSSSSSDFVFSITSGLAQKLSSADELFSNGKIVPM EFKRVVSNAPRKPHQPSCSRSRTASTRCTETKRLKEFLSADSDDAENEDEKPSSKYFWQFKRSSSLNFDPGRGNSFIRSL QFLSRSNSTGSAPNPKDTELPRETQKQRLQKQSSVSSRRSSSSSSSSSAYYFYNSSHKPSLKKNFGSSSGNGVRISPVLN LPQSYIPKASARFFGFGSLFCNGKIKRKKK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 270 | 270 | 1.7E-84 | – | |
| PANTHER | 1 | 270 | 270 | 1.7E-84 | – | |
| MobiDBLite | 87 | 106 | 20 | - | – | |
| MobiDBLite | 165 | 206 | 42 | - | – | |
| MobiDBLite | 187 | 206 | 20 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi5g1v0338400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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