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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0340500 |
| Transcript ID | LotjaGi5g1v0340500.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Alpha-glucosidase; TAIR: AT1G68560.1 alpha-xylosidase 1; Swiss-Prot: sp|Q9S7Y7|XYL1_ARATH Alpha-xylosidase 1; TrEMBL-Plants: tr|A0A072W1R5|A0A072W1R5_MEDTR Alpha-glucosidase; Found in the gene: LotjaGi5g1v0340500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:65789094..65792392) extracted from Lotus japonicus Gifu genome v1.2.
CACGAAACTGATAATCGTTTGCGGGTATACATCAGTGATGCAAAGAGTCAAAGGTGGGAGGTTCCTTATGATCTTTTGCC AAGGGAGAAACCACCTGCTTTGAAGCAGAACATTAAGAGGTTGAGGAAGAATCAAATATCAGTGTCAGAGTACTCTGGCT CTGAGCTTGTCTTCAGTTACACTACAGACCCGTTTAGCTTTGCAGTGAAAAGGAAGTCCAATGGAGATACCCTTTTTAAT TCCAGCTCTGATGAATCAGACCCATTTGGCCCATTGGTTTTCAAGGACCAGTACCTGGAAATTTCTACCAAGTTGCCCAA AGAAGCCTCCTTGTATGGTTTGGGGGAAAACACACAACCAAATGGGATCAAACTGAATCCAAATGACCCTTACACTTTGT ATACCACTGATGTATCGGCCATTTATCTCAATACTGATCTATATGGGTCACACCCTGTGTACATGGATCTCAGAAATGAA GGTGGCAAAGCTTATGCACATGGTGTTCTGCTGCTGAATAGCAATGGAATGGATGTGTTCTACAGAGGAACCTCTCTGAC ATACAAGGTTATTGGTGGTGTGCTTGATTTTTACTTCTTTGCAGGACCCACCCCTTTGAATGTTGTTGATCAGTACACTT CCTTAATTGGCAGACCTGCTCCAATGCCTTACTGGGCTTTCGGTATGATCTACATTTAACTCTCTTATCATTGTATTGCA TATTTTGTTTAAGACCAAATATGTAGATAGAGGAACTACCAATAAAGAAAACAAGGGCTTATAACAAATAATACTTGATA TGTTTGCTTTAATTCAATGAGTTTCATGGTGTATGGGATTGCAGGAGCATAATGCCTCTGAGCATAATGTTTTCAACTAC ATGTTTACTTGAATGCACATGTTTACAATCGTACATTCCTTAGTCCTCTATTATGGCAATTGTGAGCTTCTTTTGAAATA AATGGATTATCATTTTTATTTAAGGATAGCCAAATCAACTCATGACACATTATTAAGCCGTAAACTAACAAAATGCTCAC AATTGCTATCAGATAACAAATTGTTAAATGTGGAAGGAAAGACTAACAGAAGGACCTAATTTTAACATCAGAAAAAATTA GGAAGAAAAAACACATAATTGAGAGTATAAGTATCAAAACCACACTACAGTGGAAGTAAAAAGACTAAATGTGTTTGACC CAAAAAAAAGAGACTAGAAGTATAATTATCTTCTTCTTTTTTCATTTTGCTATAGAGATGGATTGTATATTTCAATCAAA ATAAGTTATTGCAATCATGCCTCGCAAATAAGATTTGCCTTGGTTTATGGAAATATATCGGTTAGCATGTCTGTTTGATC TACCATTATGAAGTTTTTTGTAAAAAGTATCTGACCAATATGCTCACTTATTATGATTTGTTGTAATGTAGGATTCCACC AGTGCAGATGGGGCTATCATAACCTCTCTGTTATTGAAGATGTTGTTGAGAATTACAACAAGGCTAAAATTCCACTTGAT GTGATCTGGAATGATGATGATCACATGGATGGGAAAAAGGACTTCACACTCAATCCAGTTAACTACCCTCGTCCGAAGCT TTTAAACTTTCTGGAGAGAATACATGGCATTGGCATGAAATATATAGTCATCGTTGATCCCGGAATTGCAGTTAACTCCA GTTATGGTGTATATCAGAGGGGCATGGCTAATGATGTTTTCATCAAGCATGAGGGTGAGCCCTTCTTGGGTCAAGTTTGG CCAGGAGCAGTTTACTTTCCTGATTTTCTCAATCCAAGCACAGTTTCTTGGTGGGGTGATGAGATCCGCCGCTTTCATGA ACTTGTTCCTGTTGATGGCCTATGGATTGACATGAATGAAGTTTCAAATTTCTGCACTGGGAAGTGCACAATTCCTGAGG GTAAGGTGTGCCCAAGTGGAACAGGACCTGGATGGATATGTTGCTTAGATTGTAAAAATATTACAAGCACACGGTGGGAT GAACCTCCCTACAAAATTAATGCTTCAGGAGTACAGGCACCTATAGGCTTTAAAACTATAGCCACTAGTGCAGTTCACTA TAATGGTGTTTTGGAGTATGATGCTCACAGTATTTATGGCTTTTCTCAAACCATTGCAACTCACAAGGGCCTTCAAGGGA TTCAAGGAAAACGACCTTTTATATTGACCCGCTCCACTTATGTGGGTTCAGGCAAATATGCTGCACATTGGACTGGTGAC AATAAGGGCACATGGGAGGATTTGAGATACTCAATATCTACAGTGCTCAATTTTGGAATATTTGGGGTGCCAATGGTTGG TTCTGATATATGTGGTTTCTATCCGGCACCCACTGAAGAGCTTTGCAATCGGTGGATTGAAGTTGGTGCTTTCTACCCTT TCTCAAGGGACCATGCAAACTACTACTCCCCTAGACAAGAGCTTTACCAATGGGAGTCAGTAGCAGAGTCTGCTAGAAAT GCATTGGGGATGAGGTACAAGCTTCTCCCTTATTTCTACACCTTGAACTATGAGGCTCATACTAGTGGAGTACCAATTGC CAGGCCACTTTTCTTCTCATTTCCAACTTACACTGAATGTTATGGCCTCAGCACCCAGTTCTTGCTTGGGAGCAGCCTAA TGATTTCTCCTGTACTTGAGCAAGGAAAGACACAAGTTAAGGCACTCTTTCCTCCAGGAACCTGGTACAGTTTGTTTGAC TTAACACAAGCCCTTATTTCAAAAGATGGAGCCTATGTTACCCTTGACGCGCCGCTCAACGTGGTCAATGTGCATTTGTA TCAGAACACCATTCTTCCGATGCAACAGGGTGGATTGATAGCCAAGGATGCTAGAATGACACCCTTCAGCCTCATTGTGA CCTTTCCAGCTGATTCAACTGAAGGAGAAGCTACAGGGATCCTATTCCTTGATGATGACGAGCTTCCAGAAATGAAGCTT GGAAATGGTTATTCAACCTACATTGATTTCTACGCAAATGCCAAAGAAGGAACTGTGAAAGTTTGGTCAGAAGTCCAAGA GGGCAAGTTTGCTCTAGATAAAGGTTGGGTTATTGACACCATAAGTGTACTGGGATTAAATGGAAATGGGACACTACCTA CAATTGAGATAGATGGAGAACCACCAAGGGGTGTCTCAAATGTGACAATTGCCACATATGAACAGAAGTACTTGCACGGT CTAGGAGACGGAGAAAAGAAGTTAGTGATGGTAGGGTTGAAGGGCTTGAATATCCCTATAGGTAAAAACTTTGCTATGAC CTGGAAGATGGGATCATAA
CDS sequence (LotjaGi5g1v0340500.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATCTCAGAAATGAAGGTGGCAAAGCTTATGCACATGGTGTTCTGCTGCTGAATAGCAATGGAATGGATGTGTTCTA CAGAGGAACCTCTCTGACATACAAGGTTATTGGTGGTGTGCTTGATTTTTACTTCTTTGCAGGACCCACCCCTTTGAATG TTGTTGATCAGTACACTTCCTTAATTGGCAGACCTGCTCCAATGCCTTACTGGGCTTTCGGATTCCACCAGTGCAGATGG GGCTATCATAACCTCTCTGTTATTGAAGATGTTGTTGAGAATTACAACAAGGCTAAAATTCCACTTGATGTGATCTGGAA TGATGATGATCACATGGATGGGAAAAAGGACTTCACACTCAATCCAGTTAACTACCCTCGTCCGAAGCTTTTAAACTTTC TGGAGAGAATACATGGCATTGGCATGAAATATATAGTCATCGTTGATCCCGGAATTGCAGTTAACTCCAGTTATGGTGTA TATCAGAGGGGCATGGCTAATGATGTTTTCATCAAGCATGAGGGTGAGCCCTTCTTGGGTCAAGTTTGGCCAGGAGCAGT TTACTTTCCTGATTTTCTCAATCCAAGCACAGTTTCTTGGTGGGGTGATGAGATCCGCCGCTTTCATGAACTTGTTCCTG TTGATGGCCTATGGATTGACATGAATGAAGTTTCAAATTTCTGCACTGGGAAGTGCACAATTCCTGAGGGTAAGGTGTGC CCAAGTGGAACAGGACCTGGATGGATATGTTGCTTAGATTGTAAAAATATTACAAGCACACGGTGGGATGAACCTCCCTA CAAAATTAATGCTTCAGGAGTACAGGCACCTATAGGCTTTAAAACTATAGCCACTAGTGCAGTTCACTATAATGGTGTTT TGGAGTATGATGCTCACAGTATTTATGGCTTTTCTCAAACCATTGCAACTCACAAGGGCCTTCAAGGGATTCAAGGAAAA CGACCTTTTATATTGACCCGCTCCACTTATGTGGGTTCAGGCAAATATGCTGCACATTGGACTGGTGACAATAAGGGCAC ATGGGAGGATTTGAGATACTCAATATCTACAGTGCTCAATTTTGGAATATTTGGGGTGCCAATGGTTGGTTCTGATATAT GTGGTTTCTATCCGGCACCCACTGAAGAGCTTTGCAATCGGTGGATTGAAGTTGGTGCTTTCTACCCTTTCTCAAGGGAC CATGCAAACTACTACTCCCCTAGACAAGAGCTTTACCAATGGGAGTCAGTAGCAGAGTCTGCTAGAAATGCATTGGGGAT GAGGTACAAGCTTCTCCCTTATTTCTACACCTTGAACTATGAGGCTCATACTAGTGGAGTACCAATTGCCAGGCCACTTT TCTTCTCATTTCCAACTTACACTGAATGTTATGGCCTCAGCACCCAGTTCTTGCTTGGGAGCAGCCTAATGATTTCTCCT GTACTTGAGCAAGGAAAGACACAAGTTAAGGCACTCTTTCCTCCAGGAACCTGGTACAGTTTGTTTGACTTAACACAAGC CCTTATTTCAAAAGATGGAGCCTATGTTACCCTTGACGCGCCGCTCAACGTGGTCAATGTGCATTTGTATCAGAACACCA TTCTTCCGATGCAACAGGGTGGATTGATAGCCAAGGATGCTAGAATGACACCCTTCAGCCTCATTGTGACCTTTCCAGCT GATTCAACTGAAGGAGAAGCTACAGGGATCCTATTCCTTGATGATGACGAGCTTCCAGAAATGAAGCTTGGAAATGGTTA TTCAACCTACATTGATTTCTACGCAAATGCCAAAGAAGGAACTGTGAAAGTTTGGTCAGAAGTCCAAGAGGGCAAGTTTG CTCTAGATAAAGGTTGGGTTATTGACACCATAAGTGTACTGGGATTAAATGGAAATGGGACACTACCTACAATTGAGATA GATGGAGAACCACCAAGGGGTGTCTCAAATGTGACAATTGCCACATATGAACAGAAGTACTTGCACGGTCTAGGAGACGG AGAAAAGAAGTTAGTGATGGTAGGGTTGAAGGGCTTGAATATCCCTATAGGTAAAAACTTTGCTATGACCTGGAAGATGG GATCATAA
Protein sequence (LotjaGi5g1v0340500.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDLRNEGGKAYAHGVLLLNSNGMDVFYRGTSLTYKVIGGVLDFYFFAGPTPLNVVDQYTSLIGRPAPMPYWAFGFHQCRW GYHNLSVIEDVVENYNKAKIPLDVIWNDDDHMDGKKDFTLNPVNYPRPKLLNFLERIHGIGMKYIVIVDPGIAVNSSYGV YQRGMANDVFIKHEGEPFLGQVWPGAVYFPDFLNPSTVSWWGDEIRRFHELVPVDGLWIDMNEVSNFCTGKCTIPEGKVC PSGTGPGWICCLDCKNITSTRWDEPPYKINASGVQAPIGFKTIATSAVHYNGVLEYDAHSIYGFSQTIATHKGLQGIQGK RPFILTRSTYVGSGKYAAHWTGDNKGTWEDLRYSISTVLNFGIFGVPMVGSDICGFYPAPTEELCNRWIEVGAFYPFSRD HANYYSPRQELYQWESVAESARNALGMRYKLLPYFYTLNYEAHTSGVPIARPLFFSFPTYTECYGLSTQFLLGSSLMISP VLEQGKTQVKALFPPGTWYSLFDLTQALISKDGAYVTLDAPLNVVNVHLYQNTILPMQQGGLIAKDARMTPFSLIVTFPA DSTEGEATGILFLDDDELPEMKLGNGYSTYIDFYANAKEGTVKVWSEVQEGKFALDKGWVIDTISVLGLNGNGTLPTIEI DGEPPRGVSNVTIATYEQKYLHGLGDGEKKLVMVGLKGLNIPIGKNFAMTWKMGS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 64 | 64 | 6.7E-23 | – | |
| PANTHER | 1 | 692 | 692 | 0.0 | – | |
| PANTHER | 1 | 692 | 692 | 0.0 | – | |
| SUPERFAMILY | 7 | 51 | 45 | 7.53E-8 | ||
| CDD | 12 | 63 | 52 | 6.08743E-13 | – | |
| Pfam | 44 | 535 | 492 | 5.4E-150 | ||
| SUPERFAMILY | 54 | 446 | 393 | 3.69E-87 | ||
| CDD | 63 | 443 | 381 | 0.0 | – | |
| Gene3D | 65 | 430 | 366 | 2.4E-149 | – | |
| ProSitePatterns | 216 | 223 | 8 | - | ||
| Gene3D | 431 | 531 | 101 | 1.5E-35 | ||
| SUPERFAMILY | 448 | 528 | 81 | 1.01E-16 | – | |
| Gene3D | 533 | 695 | 163 | 1.3E-31 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Molecular function | Hydrolase activity, hydrolyzing O-glycosyl compounds | Catalysis of the hydrolysis of any O-glycosyl bond. | ||
| Biological process | Carbohydrate metabolic process | The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule. | ||
| Molecular function | Carbohydrate binding | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates. |
Expression pattern of LotjaGi5g1v0340500.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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