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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0363300 |
| Transcript ID | LotjaGi5g1v0363300.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | DUF1685 family protein; TAIR: AT1G05870.1 hypothetical protein (DUF1685); Swiss-Prot: sp|Q71SP7|FAS_BOVIN Fatty acid synthase; TrEMBL-Plants: tr|I3SRM7|I3SRM7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0363300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:67738890..67743691) extracted from Lotus japonicus Gifu genome v1.2.
GGAAAATGAGGAATATTCGATATTTATTTATTAGTATGAGTATGAGTATGAGTATGAGTATGAGTATGACATGAATGAAT GAATAACAGCTGTCATGTATGTATGAATATGTGTGTCCATTATGATGATGATATGAGGACACATACATGATTACATGACA TGATGATGATATGAACAGTTAGTTAGTTTGTGTGTTCCGTGACATGCGTTCCTATAGATAGATAGATGAGTACATAAATA GTCCACCCGCTTTCTCCCTAGCTTCATACCTTGAAAGAAGAACAAGAAGAAAAATGGAAGCGTGGCGAAGAAAGGAAGGT GATCATCAGGAGAACAAGAACAAGAAGTTGTTGCTTGAAGGCTACGTTGAAGAGGCGGATCTTGCCAGGAGCAAGAGCCT CACCGATGACGATCTCGAGGAGTTGAAAGGCTGCGTCGATCTCGGCTTCGGCTTCAGCTACGACGAGATCCCCGAGCTCC GAAACACACTCCCGGCGCTCGAGCTCTGCTACTCCATGTCACACAAGTTCTCCTCTGCCGCCGACAGTAGTTCTGATCCT CCTCCAGCGGATTCCATCGCCAATTGGAAGATCTCCAGTCCAGGTGACCATCCAGAAGATGTCAAAGCCAGGCTCAAATT CTGGGCGCAGGCTGTTGCCTGCACTGTCAAGCTCTGCAGCTAGCTAGCTAGCTATAGCTAATTAACATTCATTCATGAGA ACCAACTCGATCAGAAACGATTGTGATTGTGATTGTGATTGTGATTGTGATTGATTCACTACAGAGGTTGTTTTACCAAT GATGGGTGGACTGGACGGAGACCTAAGCTAGCTAAGCTAACTGGAACAAGCTAAGAAGATGAGAGAAGCCGATCGAGGGT GTACGTTGTGGTTGTGTTACTTTCAGCTGAGTCGTCGATCGTCTGATCTAATCTTCCGATCCAACCCTAAATTCCATCTT AATTAATAATGTTATATATTCTCATTCTGATCATTGTTATTCTTGTATCTATTTGCATTTCTGGGTTGCTTATTGCTTCC TAGCCTCATTAATAATCAATCAAACTAGCTAGCTAGCTACTTTAATTTCCAATTTTGGCTTAATTTCACTAATTTTGATA TATGCATGCAGTACTGGAACTGGTGGTGACAGACTCCAATTAGACCTACACTTCACTTCACCTCTGCATGCATTATATTT GCTGAGGTAACTAACTTAACTGCTCTGCTCTATCTAACATTAATATTCCACTTAACCCCTTTCATGCTCACAAAAATGGC TATTCCTACTTCTCGCATGCTTACATCAACCATTTCTGCTCGTGTTCCAGACCCAACTAACTCGATCGGAGGAGAAGCTT CTGGTTTTCAGAGGAATATTGTCTTATGTTAACAAACTCATGTAACAAGTTCTAATATCACACCCTCGATCATTAATTTA ATGGTCACACCAAATTGTTCTTCAAGTGTTCTACGGAGGGAAAGGATTACTTTAGATTAATCAGACAAACTTTGTCATTG GTTTTCCCTCAACTAGATGGGAATTTGGATACCAAAACTTAACCAAGGAATGATTTTATTTTCGATCTTGTCTTGTTCAA ATACTTACTTGCTGCTCACTACTCATTCTACTTCTCAACTGCTTAAAAGTTGGAGCTTTTTAGCCTAGAAAAATTGCTCA ACATATGGAAAGTAATAATAGATGCGTATCAATCAACCGGTCTCTATTTGGAATCAATCTTCAACAATCAATCAAACCTA AGTAAGTATACTACATGATCCAAATCTGATTCTATCTAAATAAAGAAAAGATTGATTATGATTTCATAATTGTGTTTGAG TAGTTCAACTTGTCAATACGCTTTCATTTTTTGTGTCAATTCATTATGTGATCATGTTGTTAGACATGAATTATTCCTGG TGTAAACTCACTTCTAACTAGAGTTAATTTTACAAAATACATTCCATTCCAAATAAATTCACATACACTCATCCAAAATC TTAGCAGACTAGCGTTAATCTTAATAAATCTTGTTGACATGAAGCAGCACACTGGTGTCAAACTTCATCAAATAATATAG AGGTGCTCTTACCTTTCATCATTCAGGATCGTTAACCAAATTTACCAGGCCGGACCCTATAAATGTCTTCAGGCCAAATG AAGAGAACGAAAAACTGAATATAAATTTTAAGGGGCACAGGGAACTCTAGATGACCACAATTTATTTAATTTTATTTTAT TTCTTTTCTTTATTTAATCATTATTCTGAAGAGCTTAACAAGTTTATGTAATGGTTTTTGGTAAAAGGGCAACAATGCTA CAATTCTAGTATTTGTACCTACAAAGAGGACCTTTAATTTATATCAGTTTCATGTTTGCATCCACTTCAGCTATATCATT TTCATCGTTCTGATCCACAGTTGGACTCTCCTTTTCCTTCAGATTCTTCAGTCTTTTGTCTTGAATGTGACGAACATATT GTGTCAGTATGACATGAAGTTTAGGAGCGATTCTAGTTGTTGAGGGAGTATTGAGCCCTGCCATCTTCAAGGTCCTGCTG AGATGCTTCTGAGCCTTTTCAAAGTGGTCAGGGCAGAGAGGTGGAACAGTTGATCTCGTTACAGGTTTCATGCAAGTTAT AGGTCGTCCATCTTGTGCACTGGAAACAACAAAGTCACTTAGTGTCAGTTTGGTTTCTCATTTGCATCTAACACAAACAG AAAAACACACATTCCAACATATCAGCAGAAAAGTAAAAATCGTCATTGAGTTCTATGAAAATCCAAACATATACACATGC CAACAATTAGAAAAACATTTCCACTCAAAATCATAGGATCATAATCCTTTAATGTTCTTGTCTTGCTGTTCCCTGCAGGG CATTGACCATATGTGCTCTTGGGCACATCAGCAATTGATTGCAGCAAAAGATGGTACGAGTTTATTTGCGCATATCAGCA TTCCCTCATTTCACTAAAATTGATTATAACGATACTCTGTTGGGTCCTTTGAATCCATCAATTAAAACTTTCAGGACATG TCTCTGTTGAAACATTCCCATCAGAGACATGAATCCATAATTCAGTTGTTATCAAAGGAAGTACGGAAACCATAACATAA CAAGTTAACAACTGTTTATACAACACAACTTATCCACCACAATTCAGCATGACAGTGAATCTATACAAACATAAATGACT TATAAAATATACAAACATGTTAAAGTTCATAACTCGTTGACATGCACATTGCATATATAATTACACGATACAAGCAAATT ATCCCAAACCAACAGAATCAGATCAATCATTTGCAGCTGATAACATATATATGGTTTCTCAAAATTGTAAGAAGCAATCA GAAATTGAAGGAAGAGCATAATTGGATTTCATTTGAGCATGAAATTAAGAAGAAAAGTTGCAATTAAGTACCTTTGGATA ACATAAGTGCATGGCTGGTAAAGCAGCTGCCTTGGATCAGAAAGGATGTGAAGATGGCAGAAGGAGGTCAAAGGCATGGC GTTGGAAGGACAACCCTGAAAAGCACAGGGTTGGGGCTGAGGTTGGGGAATTGAGTCATCTTCGAAAGGGGAGAAGGGAT ACTGAGTGGTGTAAAGAGTGAAGAGGTGGTGAATGAGAGTCCAGTAGAGGTCTCTGTAGTGCCTCGAAAGGAGGTTCAGG TTCTGCAAACGACGCCGAAGGAGCTCACAGCGAGTCAGGTGGGTGGCACTCGACAGTGGCGGCGCCGCCGAGGATTCCGA GGTGGGATTTGGGTCCATTGAGGTTGAATTGGCGCCGCACAGACACGAAGGCAGCAGCAGGGCCGGCAAGGCATGAAACA TACAACTGTAGGAATATATATAAACTCATCTTTAAATATTGTATGGAAATGTTTGTCTATGTTTCTTCATCGATTTTCCT TTCCAGCTTTACCCCCATTTCTTCTCAATCTTTTCCTTTTTTATAGGGGTGAGGTTGGAAAACCAAAACAATGTGGATTG AGTTTAATAATTGCAAGTGTCAAGAAAGCTAAATCAATTGAGTTTATGGTAAATAATAAGTAAGAAAATTTATAATTTTA TTTTTTTTTAAATGACTTATTAGTCCAATTGGACTTTTAATCTCTATCATACAATTCATGTGTGATTTAGGTTCCTAATA ATTTTCTGAGAATTGGTCCCTCAATTTTTTCAATTCACATAATCAAGTCCATCTTTCACATTTTTTTATAGAAGGGAGGA TAAAAGCCCAGGAAACTAAATTAATCCGCATAAAAATAACCCAGCAACATCATTCCTAGGATAATCTAGCTGGGGAAATG GAGTGTTTTCACAATTAAAATAGACATTCTGCACTTCATAACCAAGATTTAGCTATGAGCACATCTATTTGCCTCGCGAT AGACAAGATGGAAAAACATCTCTCAATTTGAGTTGGCCAACTACACAATGTCTCTAACAAGATCAGTGCCAGGGTGATTC CCTAGACACTTCACTATGATGAGACCATGAGCAATCTTGGAATCCATCTCCACTTGAAGCCTTTGTTGAGATAAAGCACG GGGCAAGCCTCAACCCTTTTAAAATCCCTCGTAATTATGTCCTTAGGGAAGTATTGGTCCCGAAGTTGCAGTAGAATAGA ACCCTTTAATAACCTTGACCTAGGTGATCTCTTAATAAACCTCCACAAGCTGCCTTGCAACTTTGGTTGTATTTGATTTC AAGATACCACCTTGGGGGGGCCTCCACACAACCAGATTTTCATGCTTTTGAAGCTTAATATCTCTATCAAGAAGAAGCAA GT
CDS sequence (LotjaGi5g1v0363300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAAGCGTGGCGAAGAAAGGAAGGTGATCATCAGGAGAACAAGAACAAGAAGTTGTTGCTTGAAGGCTACGTTGAAGA GGCGGATCTTGCCAGGAGCAAGAGCCTCACCGATGACGATCTCGAGGAGTTGAAAGGCTGCGTCGATCTCGGCTTCGGCT TCAGCTACGACGAGATCCCCGAGCTCCGAAACACACTCCCGGCGCTCGAGCTCTGCTACTCCATGTCACACAAGTTCTCC TCTGCCGCCGACAGTAGTTCTGATCCTCCTCCAGCGGATTCCATCGCCAATTGGAAGATCTCCAGTCCAGGTGACCATCC AGAAGATGTCAAAGCCAGGCTCAAATTCTGGGCGCAGGCTGTTGCCTGCACTGTCAAGCTCTGCAGCTAG
Protein sequence (LotjaGi5g1v0363300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEAWRRKEGDHQENKNKKLLLEGYVEEADLARSKSLTDDDLEELKGCVDLGFGFSYDEIPELRNTLPALELCYSMSHKFS SAADSSSDPPPADSIANWKISSPGDHPEDVKARLKFWAQAVACTVKLCS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 10 | 129 | 120 | 4.3E-63 | – | |
| PANTHER | 10 | 129 | 120 | 4.3E-63 | – | |
| Pfam | 36 | 86 | 51 | 1.1E-24 | ||
| MobiDBLite | 81 | 104 | 24 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi5g1v0363300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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