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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0007800 |
| Transcript ID | LotjaGi6g1v0007800.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Low affinity potassium transport system protein; TAIR: AT2G33390.1 hypothetical protein; Swiss-Prot: sp|P27206|SRFAA_BACSU Surfactin synthase subunit 1; TrEMBL-Plants: tr|I3S296|I3S296_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0007800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:1549173..1554652) extracted from Lotus japonicus Gifu genome v1.2.
TAAAGAGTAGTTAATGTTTTGCAATTTTCTAGCACTGAATAAATATCTTGCAATTTTGTACTGCTGTGTTTAGTCATAAA TAAAAGAATCCGGTGGGTTGTCACTTTGTAACGAGAAAAATTTCCCTCATTTTCTCGGGAAAATTCTTCCTATTCTTGAC ACTGAGATTCTTATCCCACAATTTCCTCTGAATTCTTATTGTAAATTCCCATTTGATTCCACTGTTGTCTGCGTGACTTG ATAGCTACATCGTGAAGAACAACGCGTTGACCTTATTCAAGGTCGAATCCCACAAATCAAAGTTTTGATCGATTTTGGAG CTGGAACATGATTTTGAGTCAACTGGGTCAAATGGGTTTCTTTCAAATCCGAAGATTACTCTAGATTTTGGGTTGGATTG TTTTTTTTCTTCTTCTTCTGTTTCCTTTTTTGTATGTGGTTGTTGATGGATACGGATTCCAAGGATGCTAACAATTACAT GGATAATAAACCTGTGATGGGTTCTTCTTTGGGAGGTGAAAAGGTTGATGATCATGATCATGATCATGTCAATGGAGAAG ATGATAGTGACTCTAATTCTTTGTTGCCTCCCCGGAGAGGTGGCATGTCACGGAACTCTGATAAGACACGCCTGAAAGTG CAGTGGAATGATAGGAATGGAAACAAGCTTGTTGAGGTGCTTGAATATGAGCCAAGGTAACTATTTTTTATAATTGTTAA ATCTTGCTATTTTTCAGCCTCAGAATTTATAATTTCTTTCCTTATTGGCAATTTGACTTGTTCTGCTTTGATTTGTTTCA AATTTATAATTAGAATGTGCACTTTTTAATATCTTGGACAATTATTATGTACTGCTTCAGTTTTATATTGCTGTAAGAAG AAGAAAGAAGATCTTGACATGATTTTTTTTTTCCTAATCTGGAGTCTCTGGTGAATTTTTGATAAATTTATGCTGTGTGA AATAGTGAGATGACATGTTTGTGTATAATTTTTTTTCTGATGGTGTGGTGATATGTTTTGCACAATAAGCAACTCTTGAA TAAGTTGATGAATTCATTGAAGTCTGTGTATGATTTGATGTCTATCATCTTAATGTTCATTACCACTGAATTAGAAGTCT TGGTCTGAGGGGTTAGCTATAGTTAGACTGTGCATACGTGTCGAGGATGATCATCTATTGCTTTGTTTTGTTTTAACTAG CCTTTTTTATTTTAAGTCTATCAGGATCAGAATAAGATGATTTAGCTTTCTCATCTGTCTGAAATGCCATGTTTAAGTGC AAATGAGGAACTGATACGGCTCAGGTCACCATGTTTTACAAAATAATTGTACGGTGATAATTAGTAGATTGTTTATTTTT GGGTCTTTAGAAATTCTTTGAACCAGCACATTCGTCTTAATTTAGACATTTTTGGTCTTTCCTTCTTCTCTTTTCACTGT TTTTTGTTTGACTTGTTCTGTCAATGCTGAAAATTTCTATGACACAAATTGGAACTTGTCACCTTTTTATTTTTGGTTTT CCCATAGGTTATCTAGTTTTAATTATTCTATCCACAAAAAAATCCCCTTTTAACTAATTCAGAGATTTACCTTGTGATAG GCTCTTTATAACATTGGAGGTTAGCCTGCATACCATGTCATGGCTTAGACTTCGTATCAAGTCTTAGTTGACCTAGTAAA ATTTAAGTTCTACTTTATACTTCCTAGTTTTCTTTGGCCTTATGGTAGGATAGTCTATATGTGGGGTTAGGGTAGCTTCA TGATAATATGCAAATGCTACTTTTGGAGGGGGTTCTCTTTGACAGATATGCAATAGGATTGGAGGACACTTCATGTGTTT CACTTTCTGTGTTACCCTTGTTTATTGACTACTCTTACTCTGAACTTGAGGATATTTGGTCCTATGTTATGTCATGACAG TGTTAAAAAAATGCATATGGACATTTGTTTGCTTCTTAGAATTTCTGGTAAGGGAGTAGTATTAAAAAACATAAAATTAA ATTTTAAATTAGAAAATATTCATTTGTTAAGACATTGTGCTGACTTGTAAATACTAGCCAGCTGATGCCTAAGTTAGTTT TAAACACAAGGTTTATATGATTTGCCTCCAACAAGTCCTAAATTCTAGTTGTGAAATCGGTCTTACAAATTTACAATAGA TCTGCAGTGGGTCCGGGCTTTCCCTGTACCCGCAACGGCTGAAGTTTTATAGCACCAGGTTTCCCTTTTTATTGGATTTG CCTGGAATTTGATGCACTGTAGCTTTTCTTTCCAAATAAAATTCCTAACATTTCAATACGTTAGATCTTTCTTGAGCAAA ACTTAATTCAGGCCTTTCAATCTTTTGAACACTTGAGCGTTTAAACTCGCAACTCATCTGATGTAAATGATCCATGAAGG GCTTAGTACATTTGAAGACAATCTTTTAAGGACCAACGCATCAATATCTTAAATTTTGAATCTTTAATAATTAGTAATGC TTTTAATTGTAGGACATGGAAAATGCACATGTAAGTTGCTGGCAGTAAGTTAGGTTAGGTTAACTTGACTACGTGAGAAA TGTTGCAGGAATACCATGGCTGAGCTTTCCTGCTACTGATATGTCTCTTTGAAATATTGGAGTCCTATGATGGACAAGTG TAGAATAGGGGGCAAGTTTTTCCGGGGATCACTGAAAAAATATATATAAAACTCCGATACCTTAACAAGTTTGGCATAAA TTAGGGCAACTTTGGTATTACATTTTAGAAAACATAAACACCACTAGTTTTATTAGTATACTACTGTGAATTTAATCATT TTAGAATCAACGGGTGCTTCTGAAATCACAGAAACAAGGTTTGCCTTTTATCAATGCAATCGTGTTTTCTTTGTTTCCTT TCTGTTTCATTTTTATTTTCTTTGTGGTAACAGAAAGCAAAAGGTAGAGTAGAGTGAAAGACTATATTTAAGATATATGG GTTTTTGTGTTAGCAGGACTGAATCATGGGTTATTTCTGAAGGAGAATAAATAGAAAACATGCTGATTAGATGGTTTTGG TGAGGAAAAGTGCATTTAATAGGTCTTTGCTTTGACACAAAGTCTAAAAAAAATGCAGAGAAATAGGAGTTTGTGTGAGT TTCGAGATTGAGTATCCTAGGCACCCACATGAAAAGCTGGAAGTGCCTATTAGAACTAAAGTTAGCTCATGGGTGAGGAA CTGAGGATTGTTCTACTGTATTTAAAGATTTATTAAGCCATATCTCTAGTCAATTTTAGACCTCTCAACACCCCTCCGTC ATGCCCAGACAGGATATATGGAGCGCGAAATTTGCAGGATTGGACATCTGCGGGTGGACTAATAAACAGATCTAGGATAT GCTTAGATACCATAATATTAGAATTCATTTAGGCCTAACTCTACTGCTCGACCCTATATAAGGACTTGTTTGACTATATC TCTAGTCAACTTGGGACCTCTCAACGGTGCCATAAGCCCTTGGCCGTGTTCTGAAGTATAACCTGTGTTCTACTGAAGGA GGATTTATTGGTTACGTTTATGCTTTGTGAGACTCAGAAGACAATAGTAGGGGAAAACACTCAAGTTCTTGTATATGTAG GAAAGGCAGAATGACCGGCTGCATCGATATCATCATGAACTTATTATAACATCTATAGAAACTGTGGAAGAAAGTGATAA AAATAAAATTAACATGGGGAGTAGCTGAGTTTTTTGTATTGATATTGTTTTATTATATGACTTCAGGTGACCAACAAATT GGCTTTCCTTTGCTGGTGAAGTTGAAGGTTTTATGTTGAAGCATACCTTACAAATTCTGTCAGCTCCTTAATTTAATTTT AACCTTAACAAATGGGGGAATAAAAAAAGGAAAGTTTGAAGAAAAAAAACTTTTTTTTCTGCTTGGGACACATGTTCAAA GCATCTTTAATGCAAACTTCAATGTAAAACACATTGTAATCGAGTCTGAGAATCAACCCTTATTTATTGAGATAATGATA AAAAAATAACTTATCTTTGATGTCTCAATGGTGTTTGCAGTGATGTCAGTGACTCAGACGACGATGAAGATTCAGATTCT TGTATCTGTACAATAATGTAGAAATCATGTTGATAGCTGTCTCAAACTCTGCTGGATTAATCAGGGAGCATCATTGTGGC TTGCCAACCCTGAATTTGACCAAAATATGACATAACACGTTTGATGTTAGCTCTGAGGTGGGACCAAACAGTCCAATAAC CATGACAAGCTGCTTCTGAAGTCTACCAATACTTGGATTCATTTCATCTTACTGGGTTTTGAGATTATTTCTTAGCTGAA GTTTTGGGTGAATTCTCTGATGTAGATCAAAACACAAGTTTCTTCCAGCAGTATGATTCGGAAAGTATATAGCTTAGACA CATCTATTGCTTCCTTTTGTTTTCTCTGTTCCTCAGTATGTGGAACAAATTTTCATGATTCAAGAATTCATTCCCAGTTT TGTCTTTATGAAGTGATTACACCTTTTGCCATAGATTCAGCATGTGCTTCTGTAGTTTGTATTCACTTTTACTTTTCATG TGATTCTACTTTTTTTTTGTCATGAGTTATTGGAGTAATGCCCCGAGGGTGGAACGGCACTATGTGAATCTACTCAATCA ACTTATGCTGGCCAAGTTGTATAGACAAGCCTCCCCTACTTGGGAATGCACTTACTCCATATGGTTCCCTTGACAAAGAT TTTTTTTTTAAGTATGTATTATATAAATTACCTCAGTTGGTTAGAGCGTGATAAGGAAAAACCACCTCTGATTCACGTTT ACAGTCGCAAGAGGAAGAAACTCAAGCCAACCACCACCATGGGTGGCGGTGCAGCCAAATCTGCTGATGAACAAGGCACG AATGAACAGTAGCGCACATGAACAGTGCGCGTGAACAGTAACTTGGTAGTTACAAAGTTGGTTATGTGGTTATTTTATAG TTATGTAAGTTTTACTTTAGAAAAACTGCTGATAGGTAGTTATAACTTATAAATATAGAATACATCAGTCTATTTTCATT ATTCAGAAGTTGTGTGTTTTAGGAGAGGGTCTAGATTCTCGAATTCCAGAAGTACTAGGAGAGGCCTGGCTCTCGAACAT CCAGAATTTGTGTAATTATTCCTTTTTGTTCCTACCAATTTGGTATCAGAGCATCATCCAGGTGTTGTGGTGCAATTGAA TTGAGAAGAAATGGAGAAGGGGACAACAAGATACAAGTGGAGAAGGAAAAGAGAAGTTCCATGAGGCATTCATTGTCACC GAAATCAATTGACCTTCTTAGACAAATGAAAAAGGAGATCACAGATTGGAGAGATGAAATTGCTCGCCAGATAAAGGAAC ATGAGAGAAGACACGAAGAATATCAAGAATGGACGCAAACCAATTTCATACTTGTGATTTCAAGAATGAGTGCTAGGCTG AATCTCGGAATCCTACGAATACAGCCGATGAAGGTGCCGG
CDS sequence (LotjaGi6g1v0007800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTGGTTGTTGATGGATACGGATTCCAAGGATGCTAACAATTACATGGATAATAAACCTGTGATGGGTTCTTCTTTGGG AGGTGAAAAGGTTGATGATCATGATCATGATCATGTCAATGGAGAAGATGATAGTGACTCTAATTCTTTGTTGCCTCCCC GGAGAGGTGGCATGTCACGGAACTCTGATAAGACACGCCTGAAAGTGCAGTGGAATGATAGGAATGGAAACAAGCTTGTT GAGGTGCTTGAATATGAGCCAAGTGATGTCAGTGACTCAGACGACGATGAAGATTCAGATTCTTGTATCTGTACAATAAT GTAG
Protein sequence (LotjaGi6g1v0007800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MWLLMDTDSKDANNYMDNKPVMGSSLGGEKVDDHDHDHVNGEDDSDSNSLLPPRRGGMSRNSDKTRLKVQWNDRNGNKLV EVLEYEPSDVSDSDDDEDSDSCICTIM
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 66 | 66 | - | – | |
| PANTHER | 5 | 107 | 103 | 6.5E-36 | – | |
| PANTHER | 5 | 107 | 103 | 6.5E-36 | ||
| MobiDBLite | 28 | 44 | 17 | - | – | |
| MobiDBLite | 85 | 107 | 23 | - | – | |
| MobiDBLite | 87 | 101 | 15 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Response to light intensity | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a light intensity stimulus. |
Expression pattern of LotjaGi6g1v0007800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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