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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0008500 |
| Transcript ID | LotjaGi6g1v0008500.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Zinc finger protein CONSTANS; TAIR: AT1G04500.1 CCT motif family protein; Swiss-Prot: sp|Q940T9|COL4_ARATH Zinc finger protein CONSTANS-LIKE 4; TrEMBL-Plants: tr|V7BIU0|V7BIU0_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0008500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:1667468..1672690) extracted from Lotus japonicus Gifu genome v1.2.
GAAGAATTGAATTCATGGCCCAGCGCCACTCTCGCGTTGACGCCTATTCGTACAACCCCCTCATTCCCTATATATGCACA TAACTAATTTTCTCTGTTTTTGACACCATCATCTTAGGCTTAACTAACTACTCATAGCTTCTCTTCTCTCTCTTCCTTCC TAAATTCATTTCCTATTCTCTCTCTATCCTTGTAACTTTCTTTTTTTATCATCTCATGCTTTCCTTCTTTTATCTTTATT AATATTGAACCCCATTTGCCTTAATTTTGTAATCATGCATTGTTCAAGTTGAGGAACAAAAGTGTAGGACATCACCAAAT CATAACATTTAACACTTTTAAGTATATACAGACTTTTTTATTACATATATTTAACTTAACTTTCATTTGTGGTACTATAT ATACCTTCATTTGCCACCTTTCTCTGCAAGAGGATCACCATGCTGCAGGATGTTATCCACCCTCCAACACAGGCTGAGCA ACTCCCCATTGTAATTTCCTTAAGCTTGTTTATTATCTTGGTTAATCTTAAATTTAATGTTGATGTATGTGTAGAGGCTA AGCCAACTTTATGACATGCATGCACCTTCTGAGTTATGAAATTGTGCAGAACTTTACAAGTGTTTAAGAAAGTGGATTTT TTAGGGACCAAGTAGTGGCAATATTGTTCTGTAATTATTTTCACCAGGAATAGCTCCTTTCCTGCACTGAATTAACTCTT TCTATGCAAGAATCATATCCTGAATAATGAATATGGCTTCTTCTTCTTCTTTTTGAATGTGTTGTATGTTTTCATCTTAA TTTGTCTCTGAGGAGTCTGAACATTTCCTTTATTGGTAATATTCCTGGAGCTGGAAGCTAGGATTAGCTATTCTTGCAAA TTCTTTTCCACAAAGCATCCATACACACAAGTTGTAGGAAAGAAGGTTTTCTCTCCTCTCTCTCTCTCTCTATATATGGT TGTTGAGAAGGGGACCTTGGCCCAACCCTTAAAAGTGGTTGCCATGTAACTAAGGTTAGGACCGAAATTCGAGTCCTGGA AATAGTCTCTTATGTAAAAAAAAACTAAAAAAAAATAAGCTAAGCCTGCTTATAATAAACCAAGTGATCAGACCCTTTTC TCAGACCTGCGCATAGCGGGCGCTTTCGTGCCCCAGGCTTAAAGAAAAAAAATTTATATGGTTGGTGAGTATAATGTTTC ATTGACTGGCAAGAAGAAAGAATCAGAGACTCCCTGAGAGTGTGTAAGGGTTTGTTCTCTTGTGATATTATCCAATCCAA GACAATGGCCCTGCCACAAAAATGTCTTTTTCTGAGGGCAAAATCGTATATTTCATGTACCATTTCCGTGATAGTCAATT AAACATAGCTTTCAGTTCCTGCAGAATATATATCTCTTTGGGCTTCTAGTGTAAGCTTTGGCGGTTTGATATTCTTTATT GATCAGTTAGATAGGGAGAAGAAAAGACTTACTTAGTGTAATGACAAACAGTTCATGTTGATCACATAGACATAGCATTA TGGGGTTCCTTTAAGTGGCTTTCAATTTCCATTTAAGGATCATAATTTCCACTTACTCAACAAAAATAACATAGCATGAG GTTCCTTCTTTGTTTTTTACCTTGTTGCATAGTTTCATTTCATATCATATCATTCTAACATGGGGTGCCTCAAATCAAAG CTTAGATGCACATCTCTTTCCACAATAAATAACCTGAAAAGGACATTACTCAATGGAGAACTTTTTCTATCTCTATTACT AAATATGGTCAAAGAGTGACTGGACTTTGCAACCAACCAGAGTTATATGTAGAATGCACTATTGGGACTTTGCAAATTAA TTTATTTATTTCATTTTCTTCTGGACAATGAAGTCCTAGTCTTTGTGTAGGAGATACTGTTATATTATTTATCTAGCTTG TTTATCACTTTAGAATAACCACTATTGATGAAGACATGTACAAGTTAAAGTCTTAATTGATTAGAGAATATCAGCTTTTG AAATTTGAACATCTTTTCTGTTCTAAGTGATCAGATCAGACTCATGTCTATCAACAAAAAGGGAAGAATTAGATTCAGAT TTCACAAAACCCATAACTAAAAAAAATTATAGAGAATCACGTTTCTAGCTTGGTTTATAAAGCAGTGTGTTTTGTTTGAA TTATACTCAGCCTGTGTTTGGTTGTTTTAAGAAGAAATGTTGTTTACATTGTTTCTATGTCACACATTTCAGGACGAAAT CTCGAGTCCAATTAGTGCGCGAATATTTGAGCTTTGTCATGACCCTGAATTGTTCCCGGAGTCAATTCAGAATTCTGAGG TTACCTCCAGCTCAAATTGTTGCCATGAAGAGAATTCCTCATATGCAGCTTTAGATGCAGACAATAAGATCAATAGTACT ACTGAAACCAGCACCATCAATAACCAAAACACAACAAACAGCAATAACTTGTCTATTATCTTTGATTCCCAAGAAGAAAT TGAAAATGACATATCTGCTTCCATTGACTTTTCATCATCTCCAGCTTTTGTTCTCCCCATCACAACAACTCAGCAGGAAC AACAATTTGATTTCTCTTCAGCAGGTTCAGTTTTGAAGGGTCTCTCTTCTCAGTATCTCACTGATCCTGTGGTTGCTGCT GCACCTCTTGTTGGGGCCCCATTACCATCTGTTTTTGATGATGACTGCATATCTTCCATCCCTTCTTATCTCCCTCTTAA CCCTTCATCTCCTTCTTGCTCTTATCTCAGTTCTGCCATGGGAGTTTACATGCCTGGGACCCTCAACACTGCTTTGTCTG CTGATAGTTCTGGGTTGTTTGGTGGGAGCATTCTACTGGGTTCTGAACTGCAGACACAAGAATTGGACTACCAGGGAGAA AATGGTGGAATATATTGTACAGATTCAATTCAGCATATGTTTAATCCACCAGACCTTCAGGTATGTGCAATATTCAAGTT TAGTTAAGTTTTCCTTTATAGCTTTAAGTTTTAGTTAACTGTTGTTAGTTGTTGAGAATTCTCACATTGAGTAGAGATAT AGCTAAACAAGTCCTTATATAGAGTATAGTAATTCTCACCTCTAATAGTTTTATGATAAAGTTAGTCTTAACCCAAATTT TAAGAACAGTAAATGAACCAAATGAAAAAATTCATTCCCAATGTTCAGTGAATTGAATTCAGAAGTATGGAAACAGAAGT ACAATGGCCAAAGAAACTTCTTGATGATGCTAAAGCATATTTGTTGTAATTCTATAAGGCTGAAGCAGTAAAGTTCTTAA AAAATTAGGTGAGGATTTTTCTGTGTTGAACTTTTAGGGAAGGTTCATGGTCCACAATATCTTAAGGTAAAATCTCATAG GTTCCCATATCCATTAAATAATAGCTAGCTATCAGTCCCTTTATAATGTCACCTGCATTAAAAAATAGAGTTTAAAATGT TTTTAGTCTCTGTAAAATTTATGAAAATCATTTTTGGACTCTTGCAAGAAGGAATAACCACTTTCAGCCCAAAAAAAAAA GGATAAAAGAGCAGAATCATTAGAAAGACACATTTCATTCATGGGTGGCTCTGTTCATGTATCTCTTTCTAGTTTCTACA GTCTAATAAAAAGTTAATACACAGTAATAATGAGTGGGCCAGGCATAATTCTACATCCTCTTTATGTTGAATAAGATATT GATCCTTAATTTGATAATTTCAATTTCTCTCACAGGCACTTGATGCTGAGAGTCAGAAACTGGTAGCTGGTGCTGGGAGT ACTTCTGCCACTTTGGCACCAGAAATCTCACACTTGGAGGAATCTACCTTAAAGGTTGGAAAACTTTCTGTTGAGCAAAG GAAAGAAAAGATTCATAGATACATGAAGAAGAGAAATCAGAGAAATTTCAGCAAGAAAATCAAGGTACTTTTATGGTTCC TATATATCACATCAACCAAGTCTCATGCATATTCTGAAAATTCAACTAATGATACCAAAAAAAAATATAAAATATGCAGT ATGCTTGCCGGAAAACTTTGGCAGATAGCAGACCCCGGGTCAGAGGGAGGTTTGCAAAGAATGATGACTTTGGAGAGACT CATAGACCAGCTTGTAGCAGTCATGAAGAAGATGATGAAGAAGTAAGATTCCCTTTGCACATTTATATCCGTTTGGAAAT TTATCTTATAGCATAAGCTCTTGTGCATGTGTTAGACAGAACTTCAGTAAATAATAGCTTATCACATTTGTATGAGTTGT TTTGAGCTTAAATTCATAAGTTGCTCTGGTTCATTTATGAATAAGCCCTTAGGGTGCGTTTGGGTAAACAGCTTAAGGAC GCGCTTATGACAATTAGCGGTTATTGCATAAGCGCTTATTCACAAGCTAATATGAGAAACTGAAATTCTTATTCGTAAGC TAATCTAAAGAGCTTATGAAAATAAGTTCTCAAAAACACTTACACAAACGTTTATGATATAAAATAAGTTTTTTCAAACG AAGCCTTAATTATACCTACCAATAACTTATTCATAACTTATTTCAATAAGTTTCTCAAATTAACTTATGAATAAACCCTT ATGCAATCAACACTTATTGCTAACTGTTTAAGTAACTTGTTTGCCAAAATATACTCTTAATTGGTCACTGTTGTTCAACT TGCCTTAAAAAAAGGAAAAGAAAAATACTCTGCCACTTTTACATTTCAATTATTTGATGGCATAATTCCTCAATCCTTTA TTCCTTCCATTTTGTACTTGCAGATAGTTGTGAAAGAAGATGATGATATGGTTGATTCCTCAGATATCTTTGCCCATATC AGTGGGGTGAACTCCTTCAAATGCAACTATTCCATCCACTCTTTGATTTGAATTAATTAATAGTTGGACTAGTATACATA TTCTGTAGCTTCTTTAGATTTTTGCAGGGCCCTTTTCCATCCCGGGTTTCTGCTATCAGGGTTTGATAGCTTGAGGAAAC TGAATAATTGGGGTCCAAATAATATACCAATAAGTGAGTTAGGAACACACAGAAACTAGAAACTGTATACATTTTTGCAG ATATTGTCCTTTTCTATGTTGTAACTGGGAAGAAGTTTGTATTAATACATGAAAAATTCCAGTTTCCCCCAATATTGTTT AGCCCCTTAATTTCTATAATATTTAGGAACTTGCTTTTAAGTATTTTTACAGGAATTAGTTATCTTTTACTTGAACTACC AAACATGGTCTGTAGAAGCAAAG
CDS sequence (LotjaGi6g1v0008500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCTGCAGGATGTTATCCACCCTCCAACACAGGCTGAGCAACTCCCCATTGACGAAATCTCGAGTCCAATTAGTGCGCG AATATTTGAGCTTTGTCATGACCCTGAATTGTTCCCGGAGTCAATTCAGAATTCTGAGGTTACCTCCAGCTCAAATTGTT GCCATGAAGAGAATTCCTCATATGCAGCTTTAGATGCAGACAATAAGATCAATAGTACTACTGAAACCAGCACCATCAAT AACCAAAACACAACAAACAGCAATAACTTGTCTATTATCTTTGATTCCCAAGAAGAAATTGAAAATGACATATCTGCTTC CATTGACTTTTCATCATCTCCAGCTTTTGTTCTCCCCATCACAACAACTCAGCAGGAACAACAATTTGATTTCTCTTCAG CAGGTTCAGTTTTGAAGGGTCTCTCTTCTCAGTATCTCACTGATCCTGTGGTTGCTGCTGCACCTCTTGTTGGGGCCCCA TTACCATCTGTTTTTGATGATGACTGCATATCTTCCATCCCTTCTTATCTCCCTCTTAACCCTTCATCTCCTTCTTGCTC TTATCTCAGTTCTGCCATGGGAGTTTACATGCCTGGGACCCTCAACACTGCTTTGTCTGCTGATAGTTCTGGGTTGTTTG GTGGGAGCATTCTACTGGGTTCTGAACTGCAGACACAAGAATTGGACTACCAGGGAGAAAATGGTGGAATATATTGTACA GATTCAATTCAGCATATGTTTAATCCACCAGACCTTCAGGCACTTGATGCTGAGAGTCAGAAACTGGTAGCTGGTGCTGG GAGTACTTCTGCCACTTTGGCACCAGAAATCTCACACTTGGAGGAATCTACCTTAAAGGTTGGAAAACTTTCTGTTGAGC AAAGGAAAGAAAAGATTCATAGATACATGAAGAAGAGAAATCAGAGAAATTTCAGCAAGAAAATCAAGTATGCTTGCCGG AAAACTTTGGCAGATAGCAGACCCCGGGTCAGAGGGAGGTTTGCAAAGAATGATGACTTTGGAGAGACTCATAGACCAGC TTGTAGCAGTCATGAAGAAGATGATGAAGAAATAGTTGTGAAAGAAGATGATGATATGGTTGATTCCTCAGATATCTTTG CCCATATCAGTGGGGTGAACTCCTTCAAATGCAACTATTCCATCCACTCTTTGATTTGA
Protein sequence (LotjaGi6g1v0008500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLQDVIHPPTQAEQLPIDEISSPISARIFELCHDPELFPESIQNSEVTSSSNCCHEENSSYAALDADNKINSTTETSTIN NQNTTNSNNLSIIFDSQEEIENDISASIDFSSSPAFVLPITTTQQEQQFDFSSAGSVLKGLSSQYLTDPVVAAAPLVGAP LPSVFDDDCISSIPSYLPLNPSSPSCSYLSSAMGVYMPGTLNTALSADSSGLFGGSILLGSELQTQELDYQGENGGIYCT DSIQHMFNPPDLQALDAESQKLVAGAGSTSATLAPEISHLEESTLKVGKLSVEQRKEKIHRYMKKRNQRNFSKKIKYACR KTLADSRPRVRGRFAKNDDFGETHRPACSSHEEDDEEIVVKEDDDMVDSSDIFAHISGVNSFKCNYSIHSLI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 59 | 392 | 334 | 1.2E-161 | – | |
| PANTHER | 59 | 392 | 334 | 1.2E-161 | – | |
| ProSiteProfiles | 295 | 337 | 43 | 15.725 | ||
| Pfam | 295 | 337 | 43 | 7.1E-19 | ||
| MobiDBLite | 334 | 354 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi6g1v0008500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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