Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0009000 |
| Transcript ID | LotjaGi6g1v0009000.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | S-adenosyl-L-methionine-dependent methyltransferase superfamily protein; TAIR: AT4G13330.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; Swiss-Prot: sp|A5PK19|MET13_BOVIN Methyltransferase-like protein 13; TrEMBL-Plants: tr|I1LAQ0|I1LAQ0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0009000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:1726732..1729956) extracted from Lotus japonicus Gifu genome v1.2.
ATGTGGCGCAGAGGCAGAGATAGTTTCAGCCGTCTCCGCCGGTTCTCAGCGGCGGCACGACGCCGCTCGGAGGACGATGG TGACTGGCTCTATTCCTCCGAGTGGTGGGGCTCGTCCCCTGACGACGGCACCACCGTTCTCCGATCAACTTCCGGCAAGG GAAACGGCGTCGTCTCAGTCGTCGCACATCCCTCCTCCAGACCTGTTAGTTTCCCACTCATTCTTTCTTCAACAGCTTAC CTCCCTTAGGCTGTGTTTGGAGGAACCATAATCAATTTTCGAATTGAATTTAAAATTCCAGAGAAATGCAATGCAATCTT TGGAAATTTCACATTTTCTGATTACCCATTTTGATTGCTTGAATGGAACTTGGGATTTTTTTTTGTACATAATTTCAGAG TAGAATGCATTGGTCAAGGATGGAAAGATGGCTGCAGCAGAGATGTGAGGAGGTGCATCCTGGATATGGGGATGGAGGGA TTCTGAGGGTGCTTGGATATCAATGGCGGGTGCTTCGTTTCAATGACGATACGCGCCAGAGCACTGCAAAAGTAATGCTT GCTTACAACCAAAACAATCCAGATCTTGTCTATCTTATGCAGCAACCTCATTGCTTGGCTGTTCCATGTACATTACTTAA CCTTTATCTTATGTGAATGAAGGGTTAGTTTTTAGTTAGTGATTGATTGCTATGATGCAATGCTGTATGATTGTACTTAA GATTGAAGTAGCTACTAGGAAAGGTGCTAGTTATGTTGGTTAAATTATTAAATTAACTAATTTAATAACTAATTTAAGGA TTAATAGGTGTCAAAATTGGAGCGATCATTGTTTCACGTAGGATACTGAGCACCACAATAGACTCTATGCTATGCTTCAT CTTCAAATTGAATCAGAGGGATCTTCTTTGTATACCCTCTAATATTGGGCCTGTTTTTTGCTTGTGAGGGAAATTACCTT GGTATTTGGTTTCTATTGTTTACTGGCTGGTTCTTACATGCTATTTGGGAGACAACAGCTTTGTTGGTTGCCCTGCTATA ATCTTGAGCTTCTTCTTACCTTTTTGTGCAATTAGATTACTTTCTTTCTTGCATTACTCCTTAATATTTGGTTTATGCAA ATTGTTCCAGTAGCCTGGACCTGGACCATTTGATATTAGATGTTATATGCTATTACAGATTTTGATATTTTCTCTGGTCC TGAAATTTATTAGAAAAATCCTAAGAATGAGTATAGGTATTAGGGTACATTGTATGAATGTGTACAGAGTTACACTTTAG TAGTTGCTGACTGTACTAACAGTCAGCACTAGGGTTGTTATAATGAGCTGGCAATTCAGTTAGGCTATGCGGTTATGCTT AGCTGTCAACTGAGTCAGTTAGAGTTTGAGTTTGTTAAGCTTGTTGAACAAGCTATAGAGTTCTATATAAGTTGTAATCA GTCTCTTGTATCATTAGCTTTTCAATCATCAATGATAAACACTTTTTACAATTCTGAGTTTATCTAACAATAGGTAAAGG ATATTATAGGGTATTGTATTTGTTCAACAGAATTTGAATAATTTCATACAAAATGCATTTTTTGTGAATCAAAAGTTTTT TTATTTATTTTAAATATACACATTTTATAGTTTCATGTAATTTGATTTTACATGATTTAGCTTCATGCATGGCTCCGGCA TGCTCATAATTACATCTCTGTCGATGAGGACATAGGGGGGGGGGGGGGGGGGGGATGAACATTGAAAGGATGAACCTCAT CATCTGTCCTTGGAGTTGATTTTATGTTCTTCTTCAATTAAATCCCGAGTATCCTTTTGATTTATTTAGGGCTGTCTTGC AGATGTGAAGAGTATGGTAGCTGCTGGGTTGACTACCATAGCTTCATGTAATTTTGATATTATCAGCGCACGGCAAGGAA AGAAAAACATGCACATCTTATGCGTCGGGCATGGTGGGGGAAGTTTACCACTGTTTTTAGCAAGTAATATCCAAGGTGAA CATTTTTCTACTTTTGTAGTTTTTCTGGTTTTAAGCTGTAGCTTGAGATATCCAAATTAAAAGCCATTGCTTTTAAATGG AATATATACATACATGGAAATATATCTTCTAATGTGTTTTAATTTAGTATGATGCGGAAAATTACTTTTAAATTGCATAT TAAATAGAAATGTGCTGGAGCTGTGTGCACCAGGCTGCCCTTTCTCACATCCAGCATTATGAGGGATAAGGCTTGGACTT GTTGTCATTACTCATATTAGTCACATAGGGGCAGTTGAGCTATAGTGTCAATAGAAATGACCTGAAACTACGTATCATGT TCATATGCACGGGCAGCACAGCCTCTGGTTTACTGAAATACATTTTTACCTGTGCCATAAAACCCTGGCTACTTCTATTG TGTGCTTGTTTATTTGACGTGCTTTTGGGAATTGCTTTACAGCGCTCTTCCCTGTTTACTTGTCTTGGTAAATTTCTGAT TCAATTGAACCTTACTTGATTTGCTGTGCTCTGTCCAGGTGCCATTGTCCATGTAGTTGAAATCGATCCCCTTGTTATCT CAGCCTCGACTCGAGCTATGGGGTTCCCGGCTTTTTCACAAATGACACAATCCGGTGACCGGGCCATTGCAAAACCTGAT ATCATTGAAGAAGCTATGTGGAAAGGTGTCCATGAGAGGATTTACCTACATGAAGCAGATGCTGAGGAATTTGTTGTCAA TAATACCAATCTATATGACATGGTCTTTATTGATGCATATGATGGTGATGACATATTTCCCCACAAGTTATGGGACCCAA ATTTGCCGTTCCTTAAAGCTCTTAATAGTCACCTACATCCCAAACATGGTACTGTTGTGGTGAACTTGCATTCTGACTCT GACACCTCGAATCACGATGGATCTATTCCATCAGGGTTTGAACCAATTTTGCCAATGGGAAAGTATGTGTCTCAAGTTTG CCGAGCATACAAGGACGTGCTTATAGGAACTGGAAGCTCTTGTGAAGAAAAAATGGGTTCTGGTATTGCTTTTACTGTTG CAGTTCCCTGGGTCTGTAATACGTCCCTAGTTGTGTGTAGAGGTTTTGGTACAGATGGGGAGTATATTAACCGGGATTTG GTTGTAAACACTCTCATATCCAAATCCCTAGAAATTGAACATATTATGGACTTGCCATTCTCATGTTTGGAATACATAAA AAGAGGTTTTGTTCTTGTTGACTAA
CDS sequence (LotjaGi6g1v0009000.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTGGCGCAGAGGCAGAGATAGTTTCAGCCGTCTCCGCCGGTTCTCAGCGGCGGCACGACGCCGCTCGGAGGACGATGG TGACTGGCTCTATTCCTCCGAGTGGTGGGGCTCGTCCCCTGACGACGGCACCACCGTTCTCCGATCAACTTCCGGCAAGG GAAACGGCGTCGTCTCAGTCGTCGCACATCCCTCCTCCAGACCTAGTAGAATGCATTGGTCAAGGATGGAAAGATGGCTG CAGCAGAGATGTGAGGAGGTGCATCCTGGATATGGGGATGGAGGGATTCTGAGGGTGCTTGGATATCAATGGCGGGTGCT TCGTTTCAATGACGATACGCGCCAGAGCACTGCAAAAGTAATGCTTGCTTACAACCAAAACAATCCAGATCTTGTCTATC TTATGCAGCAACCTCATTGCTTGGCTGGCTGTCTTGCAGATGTGAAGAGTATGGTAGCTGCTGGGTTGACTACCATAGCT TCATGTAATTTTGATATTATCAGCGCACGGCAAGGAAAGAAAAACATGCACATCTTATGCGTCGGGCATGGTGGGGGAAG TTTACCACTGTTTTTAGCAAGTAATATCCAAGGTGCCATTGTCCATGTAGTTGAAATCGATCCCCTTGTTATCTCAGCCT CGACTCGAGCTATGGGGTTCCCGGCTTTTTCACAAATGACACAATCCGGTGACCGGGCCATTGCAAAACCTGATATCATT GAAGAAGCTATGTGGAAAGGTGTCCATGAGAGGATTTACCTACATGAAGCAGATGCTGAGGAATTTGTTGTCAATAATAC CAATCTATATGACATGGTCTTTATTGATGCATATGATGGTGATGACATATTTCCCCACAAGTTATGGGACCCAAATTTGC CGTTCCTTAAAGCTCTTAATAGTCACCTACATCCCAAACATGGTACTGTTGTGGTGAACTTGCATTCTGACTCTGACACC TCGAATCACGATGGATCTATTCCATCAGGGTTTGAACCAATTTTGCCAATGGGAAAGTATGTGTCTCAAGTTTGCCGAGC ATACAAGGACGTGCTTATAGGAACTGGAAGCTCTTGTGAAGAAAAAATGGGTTCTGGTATTGCTTTTACTGTTGCAGTTC CCTGGGTCTGTAATACGTCCCTAGTTGTGTGTAGAGGTTTTGGTACAGATGGGGAGTATATTAACCGGGATTTGGTTGTA AACACTCTCATATCCAAATCCCTAGAAATTGAACATATTATGGACTTGCCATTCTCATGTTTGGAATACATAAAAAGAGG TTTTGTTCTTGTTGACTAA
Protein sequence (LotjaGi6g1v0009000.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MWRRGRDSFSRLRRFSAAARRRSEDDGDWLYSSEWWGSSPDDGTTVLRSTSGKGNGVVSVVAHPSSRPSRMHWSRMERWL QQRCEEVHPGYGDGGILRVLGYQWRVLRFNDDTRQSTAKVMLAYNQNNPDLVYLMQQPHCLAGCLADVKSMVAAGLTTIA SCNFDIISARQGKKNMHILCVGHGGGSLPLFLASNIQGAIVHVVEIDPLVISASTRAMGFPAFSQMTQSGDRAIAKPDII EEAMWKGVHERIYLHEADAEEFVVNNTNLYDMVFIDAYDGDDIFPHKLWDPNLPFLKALNSHLHPKHGTVVVNLHSDSDT SNHDGSIPSGFEPILPMGKYVSQVCRAYKDVLIGTGSSCEEKMGSGIAFTVAVPWVCNTSLVVCRGFGTDGEYINRDLVV NTLISKSLEIEHIMDLPFSCLEYIKRGFVLVD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 18 | 428 | 411 | 4.3E-182 | – | |
| PANTHER | 18 | 428 | 411 | 4.3E-182 | – | |
| Gene3D | 104 | 329 | 226 | 8.3E-31 | – | |
| SUPERFAMILY | 105 | 318 | 214 | 3.49E-15 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi6g1v0009000.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…