Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0014300 |
| Transcript ID | LotjaGi6g1v0014300.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | POTASSIUM CHANNEL BETA SUBUNIT family protein; TAIR: AT1G04690.1 potassium channel beta subunit 1; Swiss-Prot: sp|O23016|KCAB_ARATH Probable voltage-gated potassium channel subunit beta; TrEMBL-Plants: tr|V7BK30|V7BK30_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0014300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:2595982..2603044) extracted from Lotus japonicus Gifu genome v1.2.
ATTTCGGAAATAAGGTTTCCGAAGCACTTTTTCACTCAAAAGTGGGGTGTTACATGTATTTTGCACTACAAATCACGAAT TAATTTCGGAATCTAATAATTCGAAACTTGAAAATCTGAAAATTTAGGGTGTGAAATCTAATGGTTGGGGTGGCAAATCC AGCTCTCGTATCGGACTCACCCAGAAAAAAGTTAGATCAATACTACACACATTCACTTTCATCTCATCAAAGATTCCATC ATTTCTCATTTCTCTCTTTATCACTACAAACAGAAAGTATCAATCGGAGAAAGAAGAAGAAGAAGAAGATGCAGTACAAG AACCTCGGGCGATCAGGCCTAAAGGTAAGCCAGCTATCCTACGGCGCATGGGTGAGTTTCGGCAACCAGCTCGACGTCAA AGAAGCCAAATCCCTCCTCCAATGCTGCCGCGACCACGGCGTCAACTTCTTCGACAACGCCGAAGTCTACGCCAACGGCC GCGCCGAGGAGATCATGGGTCAAGCCATCCGCGAGCTCGGATGGAAGCGCTCTGACATCGTCGTCTCCACCAAGATCTTC TGGGGTGGTCAAGGTCCCAACGACAAGGGTCTCTCTCGCAAGCACATCGTTGAAGGCACTCGCGCTTCGCTCAAGAGGCT TGACATGGAGTATGTTGATGTTATCTATTGTCATCGCCCTGATACTTCTACTCCGATTGAGGAAACTGTTAGGGCTATGA ACTTTGTTATTGATCAGGGTTGGGCTTTCTATTGGGGGACTAGTGAGTGGTCCGCGCAGCAGATCACTGAGGCGTGGGCC GTCGCGCATCGCCTTGATCTTGTTGGGCCTATTGTGGAGCAGCCTGAGTACAATCTCTTGTCCAGGCACAAGGTGTGTGA TTTGATTTTACCTGATTTGATTGGATTTTGTTAATTTTAGAAATGGTGTTGTTAATGATGTATGGATGTGTGTAGTGTTT GATTTGATTTTAGCTGATTTTGTTTGTTGGTTGAGAAATGGTGATGTTAATGATGAATGGATGTGTAGTGTGTGATTTGA TTTTAGATGATTTTGTTAGGTTGAGAAATGGTGTCGTTAATGGTGAAAGGATGTGTGTAGTGTGTGATTTGATTTTAGCT GATTTTGTTAGGTTGAGAAATGATGATGATAATGATGAATGGATGTGTGTACTGTTGTGTGTGATTTGATTTTAGATGAT TTTGGTAGGTTGAGAAATGATGATGTTAATGATGGATGAATGAAAATGTGTGCAGGTTGAAGCTGAGTATCTGCCACTGT ATTCTAGTTATGGGATTGGACTCACTACTTGGAGTCCACTTGCATCTGGAGTTCTCACTGGCAAATACAAGAAAGGAGCT ATTCCGTCTGATAGCCGTTTTGCTTTGGAGAATTACAAAGTGAGCTTAGCCCTTCTTTTCTTTTTTTGACTATTCTTTGA GGTTTTTATTGACTCTGTTTGTCTGTGTTTGTTTGGAATGAATGGTTTTGGTGATAAGAACCTGTTCCGTTTCACATAAT GTCTCTTTTTTTTGTCCCCTTGTTGTAGAGATTTTTAACTACTAGGCAACGGAAAAACTAGGAGGAACAGTGATAACTAG TGAAAAAAGAGAGTGTGTGGAAAGATGGGAAAAAAGAGTTATAGCTAAATCACCCCAACAAGTTAAGCTTACCCCTAGAT GTCCGAATATTTTGTTTATGAAAATGTATGTAACGAAGTATGTGTAATTCTCAACACATTTATCTTGATCACATTGGTGC ACCTAGAGTGTTATTTAATACTTGGGGCGAGTTAGATAACGAAAAGAACTTGTTTCATTTGACAAAATGCTGTTTTTTTT TGTCTCCTTTGTGAAAGAGCTATGTTATTTGCTACTAGACTATGAAAAACTAGGAGTAACAAGGATCAGGATCCTCTCGA GTGGAAACTTCACATGACATAGTCATGTTGTAATTTTGTGTCTATCTTTCTCTTTATATGTAAATATGTGGGCTATAGAC ACAATATTGCACCTGACACTGTGATGTGACCTGAGAGGATCCTAATCTGGAGGGAGAGTGATAACTAATGAGGTTAAATA GTGTGTGAAATGATGGGAAAAATTTGTCTGACTTATTCCAGGTTAATAATCTTGTGGACTAATAATAAAAATTCAAGTAA AGAAATGCCTTAAATTGTCTTGCGAGCATATTTATCTTCTGATCACTTTGGTCCACTTATGATTGAGTTATCTAAACCTT GAGTTGGGCTAAGTCGGACCATAGAGGCATAGACCACCCTGAAAATATAGAAATTATAGAGGAAAAGAGTGAAAGAGAGA AAAATATAAACTTAGTCCAATCGCCTTATCTTATCTGATATTTGCTGTGATAATTTGTATCAATTGATGAATGGAAATGG GATTATTTTCCCCCATTTGAATGGTTACTGAATAGTTCCCCCTTTTCATGTGTGTTGCAGAACCTGGCAGCTCGTTCATT GGTTGACGATGTGCTAAAAAAGGTTGATGGTTTAAAGCCAATAGCAGATGAACTGGGTGTGCCATTAGCACAACTTGCAA TTGCATGGTGTGCTAATAATCCCAATGTCTCGTCAGTTATCTGTGGCGCTACAAAGGAGTCTCAGGTTAGTTCTCACATG ATCAAGATATATTTAAGGACACCATTTAGGTTGTGTGTGTATGTCATATTCTTGTCAGTGATATTTGTAAATTCTGCCTT AAGCAATAAATACTTATATCAGCTGGATAATGGTATATTAATTATTTCAGGCATTGGTGGCATTATTGATTTCAATCAAG TTACTTATTTATGTTGGGATGTGTTATGAATAACTCAATTTCATTTTAATTAATATTGTCCTGTAACTATAGGGATTTTT CAACTATGTTTATCATTAAGTAGTGAGAGTAATTTTCTTTATCAAGGGGTTATTTCCTTTTTATTTCCAAAAAGAATACT TCTAAGTTTCAGTCGCAATAGTTTGATAGCATTGCAATGTGGGAAACTGTTTGTTAAGATTATTCACTTCAGATGTCAGT GCGTATGATTCAGGATGATTGATAATATTTCCTTATTCTTCTTAGTGCTCTATACCATCTTTCCCCCCCCCCCCCTTTTC TATGCTTTTGTTCTTTTTGACGTTTGAGATTAAAAGATAAGTGCCTACTCTTCTTTTGATCATATGTGTTATATTAGTGT GGAGAGGTTTGCACATCATTTCTTAAAACGTGGTGGTTGGAGATATTCATTATTCTGTTTTCCTAATGGTATGAGGACTT TTTAGTTTGGGCTTTGAAGTGAATGAAGATAGACTTTTTAGTTTAACGCAGTCATGCTTTAAAACTACTTATTTTTCTTC GTTGGAAGAAATGGGTTCATCAATTGATAATTGAGGGAGCTGAGTGTCAAGAATTAGTCCCAATTTCAGCAAAATATCGT AACCATTTGCATTATTTAAGGGTTAATACTGATTTACTAATTAAAATTTGTGATCATTTTGCAAATTATTGTGATGTATC ATGTGCGGCTCTGTCTATCATTTTAAAAAGGGTAAATAGCTGACATTTTTTATTTTTCAAATTCACTCCTCCAAAATCTC CTGGTTTGGAATCTCCTTAGTTTTATTGCATAGTTGCATCTTCAATGTCCTGTTTTTTCATTTTAGCCATACAGGGGTAA GTTTGTTCCATTGTGTTTGGAGACAACACTACTTTGATTCAGTAATCAAAGAGATCAATTTCTCACGGTTTTGATTGAAA GAGGGAAAATGGAATATCTTATTTAGTTTTCAATTGATTGTTTTAGTCTTGTAGGGCCAAATTTTGAGACCTTTTATTTA CTAGAGTATGGAATGAATGTATTGTTATTTGTTAACATTTCTGTTCAATTGCTGTCTTTGGGACTCTCCGAAGTGTTGTG CTGGTGTTGAATGGTCATTTTTGGCATGGATGTGTGATTTATTTTAGTTGTGCAATAACAGATATAGGCTTTCGATTACA TAACTTTGATTGAGGTTTCAACTATAGATATGAGCTTTTATCACTCAAGCACACACAAAAAGACACAATGTGTTAACTAG ACAGTAGGCCCTGCTATTAGGGTTATGATAAAATCATGTAGAGTTTAGACCAGTAAAGGAAATGTAAACAAAAGAGAAAA TGACTGAAAAACTGATGAACAGAGTATGGAAAATGGTACTCTGAAGTGAGCTTGTTTGTCTACCCTTAAATTTTTGTGGG TTAAGATTACATTATATTTTAAATCAAATTAACCATGGATATCCACGTCATAATGAATCTAACTAAAAGCAGAAATGAAA TCGCTATTGCTTCAAAAGAGGGAGTCAGAGGGGGAAGGGGGGTTAGCTATTATTCTTGTATTTAATTTAGAAATAAGAAA TGTAAACAAAATGATAATTAAAGCGAAAAAAAATCAGAATACAGTTTCTATTATGATGGGTCTAACAATTAGCATGTGAA AAATATCCTTTTTGCTTCGAGGGGGAATCCAATAAATATAATAGAGTAAATTGATGTTGAAAAAAAAAATCTGGTAAAAG TTGCTTGTGCTGTTGTGCATCATGCAGTGTTCCATTGGTGACATATTAACATGCAGTTATAAACATGGGTTTTATCATTG CAAAAAAGCTCTTGTATTGGACTGATAAATATATAATTGATGGATTAAATTGAAATGAGCAGCAAAAATATGTTCTAGTG GCATTGGTTTAAGTTTAACTTTTATATTTGATCTGTTATTATGAAGCTAGTGCTAGTTTTTGATTGAATTGAACCTGAAA AGAGGGATAAACTTTCTAAATGGTGCTTCAGTATGGAAGTAGGGTGCTTATGTATTCTAAGGAATAGTGTAGTATGCCAA GACACCCAGCATAATGACTGATCTAACCTTTTGTAGAATAATCTGATACTATAATTTTATTAAGATAGAGCTAAGAAAGG AAATTCTATTATTACACTCAACACTGATACAGAAATTCCCCGGTATTCGAGAGATTGGAACTCTCCTCCAATGACATTGA TTACAATTTAAACACCCTTCTATATTCCCTCTTCCACCTATTTATATCTTTTTGCCACACTCTCTTATTATCTCTGTAAC TAAAAGCTAACTGACAAACTAACAAGGGATTTTCCTAACTAACTAACTAGGGGGTTGTTAACTATCATGATCAATCACCA TAATGATGATCTAACCTTTTGTAGAACGATCAACCACCATAGCCTGCTAAGTTTACATTGATTAACCAGTTAAAAGAATA TAGATGGATGCGAAAGAAAAAGATATATAGTTCCTCTTGATCATACATACATACTGTGTGTTTATGGTATATGTGTACCT TATGATATTATTCAGTACTAATAAAGATGATTAGAAAGTATAATTTACATATGTGGATAAGCAGTAATAAAAAAAAAAAC TTACTGCATATTAATTAGAGGTATAATTTGCACGGATGGAACTCGCCATTATAATCATATCATATTTTTCTGGTTTCTTT TGCTTGAATTCTGAAGAACATGAAAGCAATTGATGTCATTCTTAATTTGGGGTAAAACTTGCCTGTAAGAATAGACTTGG CTATTAGTATAACATTATCTTATTTCTTCTGTTTTCTTTTCTCAGATTCAAGAGAACATGAAAGCAATTGATGTCATTCC ATTACTGACTCCTGCTGTGATGGAGAAGATTGAGAATGTTGTTCAAAGCAAGCCAAAGCGCCCTGATTCATATAGATGAA TTGAAGGTTTTCTTTCTATCTACAAGACTACAACACAGCATATGTGCATTCAGTGGGGTCTTTATAGTCCCGGTTCACTA AGAAGTGCAAATTCATGTTCAAGTTAACTGTTGTAATTGATATGATATCCACTTGAGAGCTCCTCCTTTTCTTTGTTGTA TTTTTACTTTCAGGGACTGGATTAAACTTTTTTTTTATTGGTTCACGTGATCCAAATCGATTTTAGAATATATTCCAAGG ACTGAGGACTTGTCACTTAATGTGCATATGGTTTGGATTAATATATGCATATATGGCTTGGATAATTTTCGCCGTAATGT GGAAGACTTATTTGGATTTTCGGAGTCCAATTGTTTTTCTTGATCCCTGTATTTTGCTCTACGTGGTGGAATAAGGTATA TTTAGTTTGGATGCCTGGAAAATGAGGGGGCAAATATTATTTCAGTCGTGGCACAGGGAACTTACCACATTCTTTCAGTC GCAACTGAACTTCCACACATGCTTCAGAGGTATCTCGAGGACCTTTATTCCTCGAACTTGAAGCAAAAGTGACCAAGTGC CCGTGGTTCCCTCAAACACCCTTGTCCCTCTCAGTGCATGAGAATTACCTAAGCATTGGAGTCACCTCCGGAACCTCTGT ATGGAATCTATAATTTTGTGTTCTGTAGGGATGATGTTCCCAATTTTCTTGGGTGTCTCCAAACGTCTCTACAAGCTAGA ATGTGTTACGGCTGATCGATGCATTTCTACTCAAAACTGCTCTTGAGTAAGGTTGGCCTTTGTCTTTATTTTTATTTTTG ATATTGGGGAGGGCTTAAGCCCATAAACTACAAAAGTCTAAGGGAGTGGAGGGGACTCCCGTTACATTATTCCTCAAGAG ACACCCAAGAAAATTGGGAACATCATCCCTACAGAACACAAAATTATAGATTCCATGTCCATGCTTTGCTAACCTAACAG CACAAAAATTAGCTTCCCGCACCACATGATGGAAAGTCACAAACCAGTTTTGAGAAGCAAGATTGGAAATTTCTCCAATT ATGTCAGCATAGGGGTGGCTTGCAGGGCAATAAATAGCCAGCAACTTGTATGCTTCCTTAGAATCCGTTTCAACTTCAAG TTCCGTGAGCTTCAGCTCATGTGCCAATCTCAAGCTCAAGCCCTTGACATTTGCCTTTATGTTTAAGGTATGTCTTAATT CGAAATTCCAGTATCAATAGGTTGAAAGTGGGTTTGATAAATGTGTTTTCAAAGTTTTTTTGAAAGTAAATGTGTTTTCA AAGTTACAATAACATGATGGTAG
CDS sequence (LotjaGi6g1v0014300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTTGGGGTGGCAAATCCAGCTCTCGTATCGGACTCACCCAGAAAAAAGTTAGATCAATACTACACACATTCACTTTC ATCTCATCAAAGATTCCATCATTTCTCATTTCTCTCTTTATCACTACAAACAGAAAGTATCAATCGGAGAAAGAAGAAGA AGAAGAAGATGCAGTACAAGAACCTCGGGCGATCAGGCCTAAAGGTAAGCCAGCTATCCTACGGCGCATGGGTGAGTTTC GGCAACCAGCTCGACGTCAAAGAAGCCAAATCCCTCCTCCAATGCTGCCGCGACCACGGCGTCAACTTCTTCGACAACGC CGAAGTCTACGCCAACGGCCGCGCCGAGGAGATCATGGGTCAAGCCATCCGCGAGCTCGGATGGAAGCGCTCTGACATCG TCGTCTCCACCAAGATCTTCTGGGGTGGTCAAGGTCCCAACGACAAGGGTCTCTCTCGCAAGCACATCGTTGAAGGCACT CGCGCTTCGCTCAAGAGGCTTGACATGGAGTATGTTGATGTTATCTATTGTCATCGCCCTGATACTTCTACTCCGATTGA GGAAACTGTTAGGGCTATGAACTTTGTTATTGATCAGGGTTGGGCTTTCTATTGGGGGACTAGTGAGTGGTCCGCGCAGC AGATCACTGAGGCGTGGGCCGTCGCGCATCGCCTTGATCTTGTTGGGCCTATTGTGGAGCAGCCTGAGTACAATCTCTTG TCCAGGCACAAGGTTGAAGCTGAGTATCTGCCACTGTATTCTAGTTATGGGATTGGACTCACTACTTGGAGTCCACTTGC ATCTGGAGTTCTCACTGGCAAATACAAGAAAGGAGCTATTCCGTCTGATAGCCGTTTTGCTTTGGAGAATTACAAAAACC TGGCAGCTCGTTCATTGGTTGACGATGTGCTAAAAAAGGTTGATGGTTTAAAGCCAATAGCAGATGAACTGGGTGTGCCA TTAGCACAACTTGCAATTGCATGGTGTGCTAATAATCCCAATGTCTCGTCAGTTATCTGTGGCGCTACAAAGGAGTCTCA GATTCAAGAGAACATGAAAGCAATTGATGTCATTCCATTACTGACTCCTGCTGTGATGGAGAAGATTGAGAATGTTGTTC AAAGCAAGCCAAAGCGCCCTGATTCATATAGATGA
Protein sequence (LotjaGi6g1v0014300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVGVANPALVSDSPRKKLDQYYTHSLSSHQRFHHFSFLSLSLQTESINRRKKKKKKMQYKNLGRSGLKVSQLSYGAWVSF GNQLDVKEAKSLLQCCRDHGVNFFDNAEVYANGRAEEIMGQAIRELGWKRSDIVVSTKIFWGGQGPNDKGLSRKHIVEGT RASLKRLDMEYVDVIYCHRPDTSTPIEETVRAMNFVIDQGWAFYWGTSEWSAQQITEAWAVAHRLDLVGPIVEQPEYNLL SRHKVEAEYLPLYSSYGIGLTTWSPLASGVLTGKYKKGAIPSDSRFALENYKNLAARSLVDDVLKKVDGLKPIADELGVP LAQLAIAWCANNPNVSSVICGATKESQIQENMKAIDVIPLLTPAVMEKIENVVQSKPKRPDSYR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 56 | 379 | 324 | 7.2E-123 | ||
| PANTHER | 57 | 384 | 328 | 3.0E-166 | – | |
| SUPERFAMILY | 57 | 375 | 319 | 1.05E-96 | ||
| PANTHER | 57 | 384 | 328 | 3.0E-166 | – | |
| CDD | 59 | 372 | 314 | 7.75494E-102 | ||
| Pfam | 72 | 372 | 301 | 1.9E-69 | ||
| PRINTS | 166 | 176 | 11 | 3.4E-15 | ||
| PRINTS | 217 | 236 | 20 | 3.4E-15 | ||
| PRINTS | 262 | 268 | 7 | 3.4E-15 | ||
| PRINTS | 314 | 326 | 13 | 3.4E-15 | ||
| PRINTS | 327 | 340 | 14 | 3.4E-15 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi6g1v0014300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…