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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0019000 |
| Transcript ID | LotjaGi6g1v0019000.4 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Sucrose-phosphatase; TAIR: AT2G35840.1 Sucrose-6F-phosphate phosphohydrolase family protein; Swiss-Prot: sp|Q5IH13|SPP2_TOBAC Sucrose-phosphatase 2; TrEMBL-Plants: tr|G7IDI3|G7IDI3_MEDTR Sucrose phosphate phosphatase; Found in the gene: LotjaGi6g1v0019000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:3413507..3418475) extracted from Lotus japonicus Gifu genome v1.2.
ATGGATCGACTCTGTGGTTCTGCCAATCTAATGATAGTGTCTGATCTTGATTTGACAATGGTAGATATCATAATTTTGGT AGTGATTTGGAATGATGTCTGAGGTAAAGTGTGGTGAAGCCTGTTTATCTCATTGCAGGTTGACCATGATGATCCAGAAA ACCTTGCTCTTCTTAGGTTTAATGCGCTATGGGAAGCTTATTATCGTCAAAACTCTCTGCTAGTTTTCTCCACTGGGAGA TCACCTACTATTTATGGAGAGTTGACAAAGCAAAAACCTTTGTTAACTCCAGATGTAACAATAATGTCTGTGGGAACTGA GATTACATATGGTGAATCCATGGTACCAGATGATGAGTGGACACAGTATCTGGATCATAAGTGGAACAGGGATATAGTTA TGGAGGAAACAGCCAAGTTTCCTGAACTAGTTAGTCAAGTATGTATCTATCATGTAATCTGTTAATTTATGAAAATTAAT CTACTCATCCTTTATCAGAATTCTTATTAGTTGAATCCTTCTTGGGAAAATGACCTTAAATCAATAATTGTATTATCTAT TAAAAACATTTTCATCCATTTTTTTATCTTTTAATTTCTGGAGTAATTGCAGTCTGAAACAGAGCAACGGCCTCACAAGG TTAGCTTTTATTTGGAGAAAGGGAAGGCATCAAAAGTCATGCAAGCTCTCTCAAATTGTTTGGAAAAACGCAGGGTAAGA ATATTATTATCATTATTTATAAAATCACATGATAAGATTATAGTTCATAAACAACTTCAGTGGCAGGAATTTTTGTGCTT CATTTAAAAGCTTTACCTAGATATGTATTTTTTGGTTAACATTTAAAGGTTAAAACCCTCTTTCTTTCTCTTTTCTGTAC AGACGATCTAGTGTGTATAGATAGCTGATCAGGTAGTCTTTTATTCTTATTTTAAATGGCACAATTTCATTATATTTATG TATAACAGTGTGATATGTGATATTCCTCCTTTCTTTTCCAGTTAGATGTGAAAATCATTTATAGCAATGGTATTGCTTTG GATATATTACCCCAAGCTGCTGGCAAAGGACGAGCTCTTGCTTTTCTGCTTGAAAAGTAAAAAGCTGATGGACTACAACC ACACAACACCCTTGTTTGTGGTGATTCTGGAAATGATGCTGAACTGTTCAGTGTACCTGAAGTTTATGGGGTGCTGGTTC GTAACATCATTAGAATTACTAAAATTTACTATATACTTGTCCGTCGTGTTTCCTAACTGTGGTTTTCCTGTGAAAAATTA TCATCCACTTCCCTAATTTGCAGGTAAGTAATGCGCAGGAAGAATTGGTTCAATGGTATGCGGAAAATGCAAGGGGCAAT CTACAAATACTTCATGCAACTGAGAGGTGTGCAGCTGGTATTATACAAGCCATTGGTAACTTCTCTCTAGGTCCACAACT CCACATTTGTCTCCAAGAGATGTTAGAGACTCAGTGTTCCACACGAAAGTTCTTAGTCCTAGCCATGAAGTAGTGATGTT CTACCTATTTTATGAGAGATGGATGCGTGGAGAAATTGAAAATTCTGAGCAGTATATGCAATATTTAAAATCTGTCTTAG TAAGTTTTGTCCCATTTGGATATTTTAAATGCAATTGCAAAATTGCTTAGAAATCTACTTCTAAGCCTGGCCAGAGCTGA GTGTCTTGCATGCTTGGGTACTTAATGTTAGGGTATTGAAAGAAAGCAAAGAGAAGTTTAAATCAAGTGCGAAGACTCTT GGTCGCTTTGACCCGACATATGTTTTATCGTAGTTAAGAGTTAAAGGAGAAACACAACATATAAAGTTCCAGTTAATATG TTGTCTATGAAGTTCAGATTTTTATATCTCCAATAGTCCAATTAACTTTCATCTGTTTATTTGAAAGTTTGAATGAGGGT GGGTGTTTTTTTCAATTTCAAACTAGAGTAACCTTTTATGTAGCTTTTGAAAACTAGAAGAGGCACCGCTAATTTCAAAT TTTTGTCTATATGTAGCATTCTACAGGAAATTATGTCCATCCCTCTGGAGTTGACCGACCTATGCACCAAATTATAGATA CCTTAAAGATGCAGTTTGGTGAGAAGCAGGGCCTAGGCTTTCGGGTTTGGGTTGATCGTGCATCTTTTGCAGAGGTTAGT TTGGGCTCGTGGCTGGTCAAATTTGACAAGTGGGAGTTATCTGGTGAGATTTTTTTTAACTGTAAATAACTACTCTTATA TTTTGTTCCTTATGATCTTCCTTTTTGTAGCCTTGCATCTTTACTTCCTTCATGAATTTTTTAAAATGAATGTTTAGGCT TGCAAGAGCAGGCTAGTATTATGGGAATGGTGTAAGTTCCTACTTCCTAGTTGAGATTTGAGTTTTTTTCTGTTTTGAGA CATTAAATATTAGGATCAGAAAGGGACACTAAATTATTCCATAGATGATAGAACTCCCTTGTTTAGGTGCAGGTTTGTCA AGTTCAGCTTACCTCTTGCAATCAGTATCATAATCATTGAAGTAGCCTCTTATTTTATTAAAATTCTTGTCATTGATAAG ATATAATTGATAAGATATAGAGTGAGAGAAGAGGGTAGAAGAGAATGAGAAATTATGAATTTTATTCTGAATGGATGTTT ACAAGCATCTATTTAAGATCAGAATAAACTAGTTGTTGATAATAACAAAAAACTGTAACTGGTGTATTGAAGATGCATCA CACAGACACACACAGTGAGCTTGGACCTTAGATCACCAAATCTGAGTAGATAGGGGTTTTGTTAAAGCATCAACAACCTG TAGATCAGCAGGAAAATGTTGAACATAAAGCTGCTTGTTAATAACCTTTTCTCTAACAAAAAACATACCAAGCTCCATAT GTTTAGTTCTCGCATGAAGATCTGGATTATGAGCTAAGAAAACATTGCTCGAATCATCACAAAACAGCTTGGGAATAACA GTGGAAAGTTTTAGTTCTCGTAAGTCGTAACAAAGATTGAGCCCAAAGTACCCCAGCTGAGAGTAGTGCTAAACACCTAT ATTCAGCCTCTGTACCGCTACTTGCAACGACACTCGGTTTTCTTGACCACGATTAAGTAAGATTTCGCCCTAGAGGTAAA CTTGCACCTGATGTAGAACGCCTATCTTCAACATCCATAGCCCAATCAGCATCAGAAAATCCTCTTCGTTGAAGAGGAAA AGATGTAGCAGGTTTCAGCAAAAGACCATATGAGATAGTACCCTTTAGGTACCGAAGAATCCTTTTTACAGCTGTTAAAC TTGTCTTGTGTCTAATGGATTTTACATTTTATTAACTGGGAAAATTCTGGACAGTTAATGATAATATACTGTAGCGGGCA CCCACTGTAGATCTATATAATGAAGGATCAGGAAATGGAACTCCGCTGTTTTTAAAAGAGCTGAGATATACTTACCATAG GAGAAGAAATAGGGCGGCAATGGAGAATATTGGCTTTGTTTGAGAGGCAGTTAATATACTTCTGTTGAGTGAGAACCAAG CTTCCAGAAGTTGAGCACTTTACTTCAATACCCAGAAAATAGTCCCGCTGGCCCAATTGCTTTAGAGAAAATGCAGAATT GAGCTTATCTATAAACTGATGAACAAGAGTGGAAGAGCTACCAATCACTATGATATCATCCACATAGACAAATTGGCACT ATGGACAAATAATCAAATAGAGACAGATCACAACAGCTACAAATGAACCCAAGCTGTAAAAGAGCGATCATTGAAGTCTT TTTGACCAAGCTTGGAGTTTGTTTTAGCCCATAGATGGACTATATTGAGCTTACAAACTAGACTTTTGTCAGCTGACTCA AATCCTCGTGGTTGTGTCATAAATACCTCTTTTGTAGAAATCCATTTGAAAAAGCATAAATACCTCCCTTTTCAAAATGA CCCAGCATTTGGCATCGGATTGGCCATCCGAGACACCAGAGGAGCAGTGAAATTCGACGCCTGGACTGGCGATGACCATT GTGGCGGTGAAGCACGTGGAGGAGAGCTGGCATTGGCGATGGTCTTTGAGAAATCAAGCTCTTGATACCATCATAGAGTT CGAGAGAGAAGAGAGTAGAAGAGAATGAAATTTTTGAATTATATTCAAAATATGAATGTTTGAGATACAAGCTTCTATCT ATAAGATCAGAATAGACTAGTTACTGATTTTAACAGAAAGAGAAACTAACTAACCAACTCTGTTACACTTGTTACAAGAG ATCATGATACAAAATTTATCCGGCAGCGGGCAGCTCACTTATCATAAAATACACAAGTAAGTTCATAATTATCAACAGAT CACGGTTTGAAAGTGTAACAACAAAATAGCATTAGAGTATATGTGGCTGAAATTGGTTTATCTGTGATCAATACATATGT ATTTAGTTTCAAGGTGCAGTGCCCATTTCACAGAAACTGATATTGGATTAGATGATATGAAAGATTGATTGTTTGAGTGA TTGCCTAACTTTCATATGTGACTCTGTCCAGAAATTGCCTAATCTAATGTAGTGTGCTGATTTTCCTTCTTTTGTTTTCA ACTTTTGATCATTTGCATTGTACTTAGGCAGCTCATCTTAGCCTCTTTAGGTAGATAAGTATTGGAAAATTTTCATTCCT TATATAAAGTCATTTTATGAATCCTCTTTCTATTACTTGTACTTCTTTGACTTATTAAACTCTGTCATCCAAAATCAGGG AATGACTTAAGGTGTTGTTTAACAAAGGTTTTGATGAGTTCAAAGGTAAATCTTTTTACACCGTATTTACACATTTCTGT TCTTATTTTTTAGTACTTTTTTTTACATGAATATTCTGATATTTGTTCCTATTAAAAAGGTTGTGGATTTTGGCAGGTTG ATGCACCAAATGAGTTTACCTGGATGCACTTACATCAGACTTGGTTGGATGGCTCAAGAGGAAAGGATGATATTCCTTGG TCTGTCTAG
CDS sequence (LotjaGi6g1v0019000.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTCTACCTATTTTATGAGAGATGGATGCGTGGAGAAATTGAAAATTCTGAGCAGTATATGCAATATTTAAAATCTGT CTTACATTCTACAGGAAATTATGTCCATCCCTCTGGAGTTGACCGACCTATGCACCAAATTATAGATACCTTAAAGATGC AGTTTGGTGAGAAGCAGGGCCTAGGCTTTCGGGTTTGGGTTGATCGTGCATCTTTTGCAGAGGTTAGTTTGGGCTCGTGG CTGGTCAAATTTGACAAGTGGGAGTTATCTGGGAATGACTTAAGGTGTTGTTTAACAAAGGTTTTGATGAGTTCAAAGGT TGATGCACCAAATGAGTTTACCTGGATGCACTTACATCAGACTTGGTTGGATGGCTCAAGAGGAAAGGATGATATTCCTT GGTCTGTCTAG
Protein sequence (LotjaGi6g1v0019000.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MFYLFYERWMRGEIENSEQYMQYLKSVLHSTGNYVHPSGVDRPMHQIIDTLKMQFGEKQGLGFRVWVDRASFAEVSLGSW LVKFDKWELSGNDLRCCLTKVLMSSKVDAPNEFTWMHLHQTWLDGSRGKDDIPWSV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 134 | 134 | 8.4E-65 | – | |
| PANTHER | 1 | 134 | 134 | 8.4E-65 | – | |
| Gene3D | 2 | 124 | 123 | 2.6E-5 | – | |
| Pfam | 2 | 106 | 105 | 1.5E-43 | ||
| SUPERFAMILY | 2 | 123 | 122 | 1.05E-23 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Sucrose biosynthetic process | The chemical reactions and pathways resulting in the formation of sucrose, the disaccharide fructofuranosyl-glucopyranoside. | ||
| Molecular function | Sucrose-phosphate phosphatase activity | Catalysis of the reaction: sucrose 6F-phosphate + H2O = sucrose + phosphate. |
Expression pattern of LotjaGi6g1v0019000.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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