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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0022600 |
| Transcript ID | LotjaGi6g1v0022600.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Chalcone reductase; TAIR: AT1G59960.1 NAD(P)-linked oxidoreductase superfamily protein; Swiss-Prot: sp|P26690|6DCS_SOYBN NAD(P)H-dependent 6'-deoxychalcone synthase; TrEMBL-Plants: tr|I3SGT1|I3SGT1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0022600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:4236455..4238406) extracted from Lotus japonicus Gifu genome v1.2.
TCCTTTCTTACAATACCAAGACCAGCCGCCATGGAGTAGATGGTCAAAGAACTAGGAATGCCACCCACCTACTACACAGG TGACTATATTTTATTGATGAAATCCTATTATAAAAAGGAGTCATGGCCACCCTCTAGTTCACAACACCAAAAACAAAACC ACAGCTAGCCAATTTAGCATTCATTCTTATCTCATCATCTTATAGTTGATCCAATAAACATGGCCGCCATCACCACCACA GTGCCTCAAGTAGTTCTCCAATCCTCCACCGGGCAACGGAGGATGCCGGTGATGGGGCTCGGCACCGCGCCGGAAGCAGC CAGTAAGGTTAGCACAAAAGATGCAGTCCTTGAGGCCATCAAGCAGGGTTACAGGCATTTTGATGCTGCTGCTGCATATG GAGTTGAGAAGTCTGTTGGAGAAGCCATTGCAGAAGCACTTCAACTTGGACTCATTGCTTCCAGAGATGAACTCTTTGTT ACTTCCAAACTGTGGGTCACTGACAACCATCCTCATCTCATTGTTCCTGCTCTTCAGAAATCTCTAAGGTGAGTGATCAT CACATCACAAATGCTTTCATTTTAATCTATATTTCTTTCTACATGAATTAATGTTCATGTTACTATCCATATATGCAGGA CACTTCAACTTGAATACTTAGACCTCTTTTTGATCCACTGGCCTATTACTACTCAACCAGGAGGAGTCAAATACCCAATT GAAGTATCAGAGATTGTGGAATTTGACATGAAGGGTGTGTGGTCATCCATGGAGGAATGCCAGAGACTTGGACTCACCAA GGCCATTGGAATCAGCAACTTCTCTATCAAGAAGCTTGAAAAATTGCTCTCTTTTGCTACCATCACACCTGCAGTCAATC AAGTAATTAATTAATAATTAGCTTAACATTACTTCACTTGAATTTGAAAGAAATCATCGATTAGCTGTTAGATCTAATTA ATTAATTAATCCAAACAGGTGGAAGTTAACCTTGGTTGGCAACAAGTGAAACTTAGAGAGTTTTGCAAGGAAAAGGGTAT TGTCATAACTGCTTTCTCACCACTGAGGAAGGGTGCAAGCAGGGGAGAAAATCTAGTGATGGACAATGACATACTCAAAG AATTGGCAGATGCTCATGGCAAGACTATAGCTCAGGTATCTTTTATACTGTTGAAAAGTCTCACATTGGTCGGAGATATG TTCTTTATAAGTCCTTATGTGTTTTAATGTAATTACTGCTCAGAAAATTAATCTCTAAACATTATTTTTACAGATTTGTC TTCGATGGTTATATGAACAAGGATTAACTTTTGTGGCCAAGAGCTATGACAAGGAGAGGATGAACCAGAACTTGCAGATC TTTGATTGGTCATTGACTGAGGATGATTACAAGAAAATCAGTGAAATCCATCAAGATAGGCTCATCAAAGGACCAACCAA GCCTCTTCTTAATGATCTCTGGGATGAGGAATGAATGGACACTCAACCTATATTTCAATACTTTGTCTTTTTTTTGGTGG TGGATATTGCTACTTCCTCTGAATAAAGGTGTAAAAGTTCTGAATTGACTTTGCACATTTCATAATGTAATTTTCAGTAA TCTATGTTTTGATTCTAAACGATGTAGAATTTCTCAAATAACCAATTGTAATTTGATTGAGTCTTCCTACTTAATTTTTC ATTGCATTATATAAGAACATATATAAAATTTCAGAACTCAACTACAGTCTACAAATGATGAATTCAGTCAAATACCAAGA AGAATGCAATTTTTTATACGCTTGCAAATATAATAATTTTCCATCGTTATCTACTTGTAATTTCCTAAAGAAATCAGTCA TATATATATTTTTTATAAGCCATATACCCATTGTACGATTTAGGAAATTATTATTCAGACTCCTCCACATTTATTCAGAC CCTCAAAAATGTGTAAAATGTCCAAAATACTC
CDS sequence (LotjaGi6g1v0022600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCCGCCATCACCACCACAGTGCCTCAAGTAGTTCTCCAATCCTCCACCGGGCAACGGAGGATGCCGGTGATGGGGCT CGGCACCGCGCCGGAAGCAGCCAGTAAGGTTAGCACAAAAGATGCAGTCCTTGAGGCCATCAAGCAGGGTTACAGGCATT TTGATGCTGCTGCTGCATATGGAGTTGAGAAGTCTGTTGGAGAAGCCATTGCAGAAGCACTTCAACTTGGACTCATTGCT TCCAGAGATGAACTCTTTGTTACTTCCAAACTGTGGGTCACTGACAACCATCCTCATCTCATTGTTCCTGCTCTTCAGAA ATCTCTAAGGACACTTCAACTTGAATACTTAGACCTCTTTTTGATCCACTGGCCTATTACTACTCAACCAGGAGGAGTCA AATACCCAATTGAAGTATCAGAGATTGTGGAATTTGACATGAAGGGTGTGTGGTCATCCATGGAGGAATGCCAGAGACTT GGACTCACCAAGGCCATTGGAATCAGCAACTTCTCTATCAAGAAGCTTGAAAAATTGCTCTCTTTTGCTACCATCACACC TGCAGTCAATCAAGTGGAAGTTAACCTTGGTTGGCAACAAGTGAAACTTAGAGAGTTTTGCAAGGAAAAGGGTATTGTCA TAACTGCTTTCTCACCACTGAGGAAGGGTGCAAGCAGGGGAGAAAATCTAGTGATGGACAATGACATACTCAAAGAATTG GCAGATGCTCATGGCAAGACTATAGCTCAGATTTGTCTTCGATGGTTATATGAACAAGGATTAACTTTTGTGGCCAAGAG CTATGACAAGGAGAGGATGAACCAGAACTTGCAGATCTTTGATTGGTCATTGACTGAGGATGATTACAAGAAAATCAGTG AAATCCATCAAGATAGGCTCATCAAAGGACCAACCAAGCCTCTTCTTAATGATCTCTGGGATGAGGAATGA
Protein sequence (LotjaGi6g1v0022600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAAITTTVPQVVLQSSTGQRRMPVMGLGTAPEAASKVSTKDAVLEAIKQGYRHFDAAAAYGVEKSVGEAIAEALQLGLIA SRDELFVTSKLWVTDNHPHLIVPALQKSLRTLQLEYLDLFLIHWPITTQPGGVKYPIEVSEIVEFDMKGVWSSMEECQRL GLTKAIGISNFSIKKLEKLLSFATITPAVNQVEVNLGWQQVKLREFCKEKGIVITAFSPLRKGASRGENLVMDNDILKEL ADAHGKTIAQICLRWLYEQGLTFVAKSYDKERMNQNLQIFDWSLTEDDYKKISEIHQDRLIKGPTKPLLNDLWDEE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 4 | 315 | 312 | 3.2E-119 | ||
| PANTHER | 5 | 315 | 311 | 3.3E-187 | ||
| PANTHER | 5 | 315 | 311 | 3.3E-187 | – | |
| PIRSF | 7 | 310 | 304 | 5.2E-84 | ||
| SUPERFAMILY | 20 | 304 | 285 | 3.54E-81 | ||
| CDD | 21 | 295 | 275 | 4.78196E-81 | ||
| Pfam | 26 | 295 | 270 | 3.3E-48 | ||
| PRINTS | 46 | 70 | 25 | 1.3E-51 | ||
| ProSitePatterns | 50 | 67 | 18 | - | ||
| PRINTS | 107 | 125 | 19 | 1.3E-51 | ||
| PRINTS | 154 | 171 | 18 | 1.3E-51 | ||
| ProSitePatterns | 154 | 171 | 18 | - | ||
| PRINTS | 188 | 217 | 30 | 1.3E-51 | ||
| PRINTS | 231 | 255 | 25 | 1.3E-51 | ||
| ProSitePatterns | 264 | 279 | 16 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Oxidoreductase activity | Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of LotjaGi6g1v0022600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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