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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0023900 |
| Transcript ID | LotjaGi6g1v0023900.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | DnaJ domain-containing protein; TAIR: AT2G05230.1 DNAJ heat shock N-terminal domain-containing protein; Swiss-Prot: sp|O13633|YNF5_SCHPO Uncharacterized J domain-containing protein C17A3.05c; TrEMBL-Plants: tr|A0A1J7H8Z3|A0A1J7H8Z3_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0023900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:4412325..4415262) extracted from Lotus japonicus Gifu genome v1.2.
GTTACCATCAAATTCCCATCTACCATTGTCAGAAAGCTCCTATTCATCCACGAAATTGGATCCGTTTTGATATCTCAACC CGGACCCGATTTCATATGCAACCGGCTCCATCAAAATTTGGTTCGCTGCTCGAAGATTCACAGTCACTGTGTAAGTTCAA TTTTGCTCGTCTTCTACATCCTTCAATTTTAGCTCCAGTCTCTGTTTTTTTTTTTTTTAAGAATATAATTCTAATTATTC TAATTTTTTTTTTCATAATGGCTACTTCCTTTTTTTGTTATCATTTTTTATTTTGAATAAATTGTGAATTTTTATGTAGA GGATTTTTGTTGAAGATTTTGGATCTCTGCTTAAATTTAGGGTTTTATGGATGAATTTTCTTGTGGGTTTCAAGATTTAT ATTTATTTTTATTTTGATATTACAATTGGAATTGTGGGTTTTGTTGGAAAATTTAGGTAGTCAAGTTTGATATTACAATT GCATCAGATTTTTTTACTTTTTATGTGTTTGCTTGAAATGATGATTTTAGTGCAAACAATTCAACTGCATGACATGATTG GTACTTGGTAGTTATGTTTAAAGTTGATTCAGAGTTGTTAATTTAGAGGGTGTATCTCAAATGGTGACTACTTTTGAGGT TTACATTGCTGCTCAAGTCGCCGGTAACGGTGAACTAGATTTTTATGCTATTCTTAGTTTGAAACCTTCAGCAGATATAT ATTGAACCTGTCAAGAAACAATACAATAAGATGGCTGCGTCGCTTCACCCAGATAAGAATAAATGTGTTGGAGCTGATGG GGCATTTAGTCTTGTTTCTGAGTCATGGGTCTCGCTTTCAGGAAGTTCTGTGACCGGTTCTTGTGATCTCAAGAGAAATG CAAGATTGGGTGCTGCGATTAGAAAACGTTCCAATTTGTCAACCTCTGGTGGTAATCGAGATACATTCTGGACAGTTTGC AACACTTGTAAGGTTCAGTATGAGTATCTGCGAAAGTATGTAAATAAAAAACTTTCTTGTAAGAATTGCCGAGGCACTTT CACTGCTTTTGAAACAGGAGCAGGACCGCCAAATGGTTCATACCCGTATAGTCCTTGGTCATATATGCCTGGCAAAGGGC ATGGAAGCCATTCATTTGATAGAGTTACATATGTTCCAACTAGTGGCGCCTACTTCTCTGGCAAACGGGTCACGGGATAC CATTCAGGACATGGATATGAGTATGTTTCAAATGTTCCATATCAGGGAAGCTCTTCTGGATTTGTCAATCAAAATGGATT AACTACCTTAAGTGCTAATTCCGTTCAGCAGGCCAATGGGAATGTAAAGATGGGAAGACCGAAAGTTAAAACAGGAGCTG GTAGGAAGCATTACAGGACACAGAATCCGGTAAATACAAATTCTGATGTATCACCCTCTTTTAATGAACCACAGGAAGTT AAGCTTAGTAGACCTGAGAAGAAAAGGAAAGTTGTGGGAGCTAGTTGCAGAAATGGCCATGAAGAAAAGGCGTCAAAATG TGCTTCAGGATCAACATTGGCTAATGGAAATGAAAGCACTGGACATGGACAGAGGCTCTCCTGCAAAAGTGAAGTGCCAA CCAAGCCGTATTCCATGGCACCAGCTTTTGATGCAAGAAAATTATTGATTGAGAAGGCCAGGACAGAAATAAGAAAGAAA CTGGAAGAGATGAAGTTGGCATCTAAAACTGTTGCTGCTGTTAATGAGAGAGAAAAATCACAAGCTGAAGCTGGTCAAGT CAAAAGCGGTTCACATACAAACACAGTTCTGGATGTTTCTGGTAATCATTTCGAGCATGGGAAAATTGGTCCAGTCTCAA TGACTGTCCCAGATCCTGACTTTCATGACTTTGACAAAGATAGGTCAGAAGAATGCTTCAGGCCTAAGCAAATATGGGCC TTGTATGATGAGGAAGATGGCATGCCTCGCTTGTATTGTCTTATCCGTGAGGTTATCTCTTTCAATCCATTTAAAGTTCA TATTAGTTACTTGGGTTCAAAAACAGATAGTGAGTTTGGCTCAGTGAACTGGATTGATTCAGGTTTCACAAAATCATGTG GAAATTTTAGGGCCCTGCACTCTGATGTTGTTAATCAAGTTAACATTTTCTCTCATGTTCTAAGCCGCACGAAGGTTGGT CGAGGTGGTTGTATTCGCATGTATCCCAGCTGTGGAGATATTTGGGCTATTTACAGAAATTGGTCAACAGAATGGAACAG ATCTACACCAGATGAAGTGAGGCATCAATATGACATGGTGGAGGTGCTGGATGATTACTCTGAGGAGCTCGGTGTTTGTG TTAGTCCCCTTATTAAGTTGGATGGGTTCAAAACAGTATATAAGAGGAACACTGACAAATGTGTGATTCGATGGATCCCA AGAAGAGAAATGTTGTGCTTTTCACACCAAGTACCTTCATGGCTGCTGAAGGGGGAAGAGGCTTGCAATTTGCCGGAAAG GTGTTGGGACCTTGATCCTGCTGCAACTCCAGATGAGCTCCTTCAAGCTGCTACTGAAGCAAACATTTCATAGACATTGG TTGAAACAATTATTTGGAAACTTATTATCATTCTTCTTCCAACAATGTTTTAGATTTAACTGCACACTATGCACACATAG CGGAGTCCAATGAATATTAATTACTGACTTTTTAAGAGAGTAAAATTTTATTTGGTATCATAGAATTTAAGATCTACTGA TTGCTTGTTCACCAAAGTCCTCTTGTAACCTTTGTAAGTGGTCAAGGCCAGATTGACATTGGATCTACTGCTGTAACCAG AGTTCTGGCCAAAATTTACAGGTAAAGAATTAAAGTCAGAAAGCAATTTAAATTTCGATAGACAACTTTTAAGGGAGAGA ATGGTGACTAGAACTATCACCTTGTTTGTGGAAAATTTAATTAGTGTATTGTTTCAAA
CDS sequence (LotjaGi6g1v0023900.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTGCGTCGCTTCACCCAGATAAGAATAAATGTGTTGGAGCTGATGGGGCATTTAGTCTTGTTTCTGAGTCATGGGT CTCGCTTTCAGGAAGTTCTGTGACCGGTTCTTGTGATCTCAAGAGAAATGCAAGATTGGGTGCTGCGATTAGAAAACGTT CCAATTTGTCAACCTCTGGTGGTAATCGAGATACATTCTGGACAGTTTGCAACACTTGTAAGGTTCAGTATGAGTATCTG CGAAAGTATGTAAATAAAAAACTTTCTTGTAAGAATTGCCGAGGCACTTTCACTGCTTTTGAAACAGGAGCAGGACCGCC AAATGGTTCATACCCGTATAGTCCTTGGTCATATATGCCTGGCAAAGGGCATGGAAGCCATTCATTTGATAGAGTTACAT ATGTTCCAACTAGTGGCGCCTACTTCTCTGGCAAACGGGTCACGGGATACCATTCAGGACATGGATATGAGTATGTTTCA AATGTTCCATATCAGGGAAGCTCTTCTGGATTTGTCAATCAAAATGGATTAACTACCTTAAGTGCTAATTCCGTTCAGCA GGCCAATGGGAATGTAAAGATGGGAAGACCGAAAGTTAAAACAGGAGCTGGTAGGAAGCATTACAGGACACAGAATCCGG TAAATACAAATTCTGATGTATCACCCTCTTTTAATGAACCACAGGAAGTTAAGCTTAGTAGACCTGAGAAGAAAAGGAAA GTTGTGGGAGCTAGTTGCAGAAATGGCCATGAAGAAAAGGCGTCAAAATGTGCTTCAGGATCAACATTGGCTAATGGAAA TGAAAGCACTGGACATGGACAGAGGCTCTCCTGCAAAAGTGAAGTGCCAACCAAGCCGTATTCCATGGCACCAGCTTTTG ATGCAAGAAAATTATTGATTGAGAAGGCCAGGACAGAAATAAGAAAGAAACTGGAAGAGATGAAGTTGGCATCTAAAACT GTTGCTGCTGTTAATGAGAGAGAAAAATCACAAGCTGAAGCTGGTCAAGTCAAAAGCGGTTCACATACAAACACAGTTCT GGATGTTTCTGGTAATCATTTCGAGCATGGGAAAATTGGTCCAGTCTCAATGACTGTCCCAGATCCTGACTTTCATGACT TTGACAAAGATAGGTCAGAAGAATGCTTCAGGCCTAAGCAAATATGGGCCTTGTATGATGAGGAAGATGGCATGCCTCGC TTGTATTGTCTTATCCGTGAGGTTATCTCTTTCAATCCATTTAAAGTTCATATTAGTTACTTGGGTTCAAAAACAGATAG TGAGTTTGGCTCAGTGAACTGGATTGATTCAGGTTTCACAAAATCATGTGGAAATTTTAGGGCCCTGCACTCTGATGTTG TTAATCAAGTTAACATTTTCTCTCATGTTCTAAGCCGCACGAAGGTTGGTCGAGGTGGTTGTATTCGCATGTATCCCAGC TGTGGAGATATTTGGGCTATTTACAGAAATTGGTCAACAGAATGGAACAGATCTACACCAGATGAAGTGAGGCATCAATA TGACATGGTGGAGGTGCTGGATGATTACTCTGAGGAGCTCGGTGTTTGTGTTAGTCCCCTTATTAAGTTGGATGGGTTCA AAACAGTATATAAGAGGAACACTGACAAATGTGTGATTCGATGGATCCCAAGAAGAGAAATGTTGTGCTTTTCACACCAA GTACCTTCATGGCTGCTGAAGGGGGAAGAGGCTTGCAATTTGCCGGAAAGGTGTTGGGACCTTGATCCTGCTGCAACTCC AGATGAGCTCCTTCAAGCTGCTACTGAAGCAAACATTTCATAG
Protein sequence (LotjaGi6g1v0023900.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAASLHPDKNKCVGADGAFSLVSESWVSLSGSSVTGSCDLKRNARLGAAIRKRSNLSTSGGNRDTFWTVCNTCKVQYEYL RKYVNKKLSCKNCRGTFTAFETGAGPPNGSYPYSPWSYMPGKGHGSHSFDRVTYVPTSGAYFSGKRVTGYHSGHGYEYVS NVPYQGSSSGFVNQNGLTTLSANSVQQANGNVKMGRPKVKTGAGRKHYRTQNPVNTNSDVSPSFNEPQEVKLSRPEKKRK VVGASCRNGHEEKASKCASGSTLANGNESTGHGQRLSCKSEVPTKPYSMAPAFDARKLLIEKARTEIRKKLEEMKLASKT VAAVNEREKSQAEAGQVKSGSHTNTVLDVSGNHFEHGKIGPVSMTVPDPDFHDFDKDRSEECFRPKQIWALYDEEDGMPR LYCLIREVISFNPFKVHISYLGSKTDSEFGSVNWIDSGFTKSCGNFRALHSDVVNQVNIFSHVLSRTKVGRGGCIRMYPS CGDIWAIYRNWSTEWNRSTPDEVRHQYDMVEVLDDYSEELGVCVSPLIKLDGFKTVYKRNTDKCVIRWIPRREMLCFSHQ VPSWLLKGEEACNLPERCWDLDPAATPDELLQAATEANIS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 596 | 596 | 1.0E-213 | – | |
| PANTHER | 1 | 596 | 596 | 1.0E-213 | – | |
| MobiDBLite | 193 | 283 | 91 | - | – | |
| MobiDBLite | 208 | 228 | 21 | - | – | |
| MobiDBLite | 230 | 254 | 25 | - | – | |
| MobiDBLite | 258 | 277 | 20 | - | – | |
| Coils | 300 | 320 | 21 | - | – | |
| Pfam | 363 | 570 | 208 | 5.1E-72 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi6g1v0023900.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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