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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0025800 |
| Transcript ID | LotjaGi6g1v0025800.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | CONSTANS-like zinc finger protein; TAIR: AT3G07650.1 CONSTANS-like 9; Swiss-Prot: sp|Q9SSE5|COL9_ARATH Zinc finger protein CONSTANS-LIKE 9; TrEMBL-Plants: tr|K7N1D6|K7N1D6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0025800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:4646643..4652240) extracted from Lotus japonicus Gifu genome v1.2.
GAAAAAGGAAAGTCCTAAGTCCTAACCTTTTCCTTTCACTATGAAAAGGACATGGTCCCACTTCCATTATATTTTTTTAC TCTTTTGGTTGCACTTTTTATCAGCTTTGCTTATGTCACGTTAACACTTAACAGTTAACATATCAAACAACACCATTTGC TACTTTGCATTATTATTCTTACTTCTTTCTCCTCATCTCTCCGCCCTATATCTGAACTATATCTATCTCTCTATCTATCT TCCCTTTCTTTCCTTCTTTCTTATCTATCTCAGGTTTCTCTTCTCTCTGAATCCAACCTGAAAAATTCAGCTGCTTCTTG CTTTGCTTTCAGGTTTTGCATAAAAAAGTTCCTGAAAAAGCAAACACCCTTTGCTAACCGATCTTGTCCTCTCTGTCTTC CTTGCCATAAGGTAATTTTCTTCACATGTGCTATACCTCTGCTTTTACATGTTTTAGGAAAATGAATTTTTGTGCTTTTT TGTTGTTTCTGGAAAGTTGATGTTTTCTGGGATGAAACTTTTTATGAGCTCTTAATAAATTGAAGACTTTTTATGTAATT CTTCTCTATGTGGTGATTGAATTAGATATAAGATATGTTACTCTTGTTGTCTCTGTGTCTTTTTTCTTTTCTTTTTGTGG GTATATTTTTTTGTACAATTTTTTTTTGTGGGTATATGATTCTGTGTTAGTGATTTTTGCTGATATTTTTTATTATTTAG AATTGATCTGCCACTAAAAATTTATCCTATAATTTTTTTTTGTCTGAATTTGGTTTTTATTGGCTTTTATGATGATGGAA TTGCAGAGTTAACTTGATCTATGAACTAGTTTTTATTTTCTAATCAAAGAGCCTTTGCTGGTTCTTCTCACCAATTATAA TCAGATACTGTTGTCTATTATTATTATCATCACAAAATCATCATTTGCTGCTGTGTAATTTCGTGCTGAGTTTTTTTTAC TTGCTATGGCATCTACACAATTTTCATAGTTGGAAGTAGAATTTCCAATTTTTTTTCTATTTACATTCCTAATTATTGAT CTTATTAAAATGCTTACTTGTTTGTTTCCTTGCAGTTGCTGAATTCACAGTATTGAAATTCTCCTTTCTTTATTAGAATC TGGATTCAGTCGGGAGAGGTTCTGTTTTTCAAAAGAAATTGTAGCTTCTACAGATTCTTACTAATTGGAGCTTCCTTAGT ACAGATTAAGGAGCCAAGAAAAAAGCCAGTTTAAGATGGGTTATATGTGTGATTTTTGTGGGGACCAGAGGTCCATGGTG TACTGCCGCTCTGACGCTGCGTGCTTATGCTTGTCATGCGATCGAAATGTTCATTCCGCGAACGCCCTTTCAAGGCGGCA TTCAAGGACCCTTTTATGTGAGAGATGCAATTCACAACCTGCCTTTGTAAGGTGCACTGAAGAGAAAGTTTCACTTTGTC AGAATTGTGACTGGGTGGGTCACGGTGCCTCTACATCTTCAACACATAAGAGGCAACCAATCAATTGCTACTCTGGATGC CCCGCAGCATCTGAGCTATCTTCTATATGGTCATTTGTGGATGATATCCCTTCTATGAGCGACTCTACATGTGAGCAAGA ACTTGGTTTGATGAGTATTAATGAGAACCGTGGCGAGAATGGTTGGGTTCCTCCAGAAAACCAGAATGTGTCTGGTTCAG ATCAAGGTACTGATTTACCTGGTTCGGATAAGCGCTGGATTGGTACATCTTCAAAGCCTGAGTTAAGCTCTGAACCTCGT GTTCAGGACCAGCCAGCTGGACCTTCAAATGAATATCTGCCAAAGGTATAGTTGAATGTCATATTTTCATTTTCCGATTT TCGTCACGAGTCTCATAAGGTTTTAAATTGCGGTTGCGGTTTCCGCATCGTTGTGGAATTGCGGACCAATGAAGGTTGAT GTGGCCGCAATTGCGGACAATGGGTTGATTTTTCTAAGCAGTTTTTTGCCAACCACATCATGCATGTTTGGGTAACAGTG AAAAACCAGGGCCAAGCGAAAATCACGGTGAACAGAAGCAACTTCCATTAGCTTTTACGACTGTCCACCATAATTTTGGC CTCGCTATGGTTTCCCTCCATGTATCCAAACATGCACTACATTTTCCTGTGTCATAATTCATTTGGTTGAATTCTCAATT CTTATGAAAGCTGCTTGCTTGCTTTGGCTGCTTCTGCCTACGTATGTATTGTTTCGCATTCTAAGGTGTACTTTTGTTGC AGATAGTTTTAGCATTCCTGATTTATTAGTTTTTTGTACTCAAATGAGAAGTTGGAATTAGCATATTTCTTTCATGTGAA TAGCTTAGTTAAAAGGCTTTTGTATCTAATTGTGCCAACAATTAGTCCATTACTTATGAGTTTAGTTTTCTATATTAAAG TTCTCATACTTTCATCAGATTGCATAGCTAATCTCTCATAGTTGATCTGCAGTTATACTGTCATGCTACAAAATGCGCTT CAATACGTGAAGATGATGATCTGTATGGTGATTTCAACATGGATGAAGTCGATCTAAATTTTGAGAACTACGAAGAACTT TTTGGTATGGCCCTCACTCATTCTGAATCGCTTTTCGAAAATGGTGGATTTGATAGCTTGTTTGGGGAAAAGGATGTGTC TCCTGGAGATTCTAATTGTCAGGATGGTATTGCTGCAGAGGTGCTAAACTCTTCTTACCCTTTGCTTGTGATAATTTTGG CTTTTCTATTGTTGGAGCATGATATGTTAATATGCTCCATATGTCTCTTTAAAAAAAATGCTCCATATGCTGCATCAATG ATATTCTTGTATATTCAATTGTGTGCATTTGTTCTTCTGAATATATTAACCATATGAATTAAAATCTATGCTCAGTCAGA AAAGGGATTTTCAGGCACGTTGCATCATAAGCACGCTCCTTTGTGACTTTAATTATTAATTATCCTTTGTACTATTATTT GGTAAAGGATTTAAGTCACATTTTCTTGTTTCTCCCCCCCCCCCCCCCCCCGCTTTTCTTCTTGCATCTCTTCTTACTTT CCCTTTCAATGACTTATCTTAAAATTCTTCTTGTATGATATATACATACATACTTAGTATGTTTTCCTGCCTTGTTTATT TTGGTTCAACTTTAGTCTCTTGGCGTTGGAATGTGATTCTTGGTCTACACACTGTTGTATATTTTGCAAATTGAAGCTAT TGCAAAATTCTTAGGTCTTAAAAACTTCTTTTTCTCCTTCTTTTCTTCCCAGTCCTTTTGAGACATTTTTCATCTTAAAA CTCTTAAATATGCATCTCATGTAATTAAACGGTGCAATAGCTAATGGTTTAATGTGGAAGGAAGAAGAAGGAAGCTAGGT TCAATTTGATGGCTTCATTTTCAGCAAAATTTGCTCACTATTTGAACATTAACATTTCTATTACAATATTAGCACTCATT TAGTTGTAATTATGTTGATTTGCTAGTGGTGAGGTTCTAACTTCTAAGATAGTTTCTGATTACTAGGTTGCAATTGTCCT TCCTTTGATTCATTATCATCAAGCTCTATCATTAAAACATCATTAGTCATCACGCTCTCACAGTTTCTCTCACTGGTTCT TTCTTTCAACACTTAAAAGAGTGTTGTAAAATAAATAATTCTTCTGTAACATTTCATTTACTGTATACTTATTTTCAGAT CTAACTTTTGTCTCCAGGGGTCATACAATGGACAGGTCAATGCAGTGCAACCAGCATGCAGCAATACAGCATCTGCAGAT TCCGCATGGAGCGCTAAGACCGAGCCAATTCTGTGTTTTACGCCGAGGCATGGCCAATCAAACCTTTCATTTTCTGGCAT TAATGAAGAGATCAGCGGCGGCGACCATCAAGATTGTGGGGCTTCTTCAATGCTTCCCATGGGAGAACCTCCGTGGTTTA CACCTTGTTCTGAGAGTAACCAACATTCGGCCAACCGCAGTAATGCTGTCATGCGTTATAAGGAGAAAAAGAAGACACGC AAGTAAGTAGTCACAATAAATAGAAATTCTTCTTCTTCTTTCTGTTTCTTTTCTCTCAATCTGTATACTTTTGCTCTGCT ATTCACTGGCAACCGTGTTGGTTAAATATTGGCAGTTGTTGCAATAGCCATAATTGATTATTGACTTTTAGCCTGTACAG ATACAGACCGAAGAACACTCATTGGAGCTAAAAAAATCTTGATAAACTCCACAAGTGTTCTTTGGTCTGCATACAAATGA GTTCTCTGTTCTGGTCTCAATTTTTTATTATTGGGTTACTATCTTTGCTATCAAGCTAGATAGCTCTTTCCTAACTTTCC AAACATCAAAGCATGTATCCTCTTTACACTTTAGTTGATTTAACATCAATTTTCATCATCATGTTATTAGGTTCGACAAA AGAGTGAGGTATGCCTCTCGCAAGGCTAGGGCTGATGTTCGAAGGCGCGAGAAGGGCCGGTTTGTGAAAGCCGGGGAAAC CTATGATTATGACCCTTTGAGCCCAACCAGAAGCTACTGAAAGGTACAACTCTTAACCATGTTATATAAAAAGAAAGAAA CAGTTAGATGAAAAAAAAAAAAACAGTTACCTGAAAAACGGATCAAAATTTAATGCATTCTTTCTCCCTGAAATTACAAG CTAACTGATTTTATCACAGGGCACTAGATTTTGCAACAAGGAGGAGAAAAAAGGATTTTCAACAAGGCTGTGTTCAACAG TGTAAGCTCAGGAGCTGACATGGCATGATCACAAAGTGTCCTCTTCAGGCAATGCCTCTGTTATAGTCCGTTTGGTTTAA AGTTAGAAAGTATGAAAACGGAAAAATAACACATCCCGATGCACGTTTTGTGGACGTAACAACTTGCCATTTCAACGAAA AGTGCCTTGGGATTTATTATTTTCCCGTTTTAATACTTTCTAACTTCAAACCAAACCAGCTTGACTTGGCAACTTCTGCT TCTTAATTCTTCTGTAAGAATTCAAAAGTCATCAATGTCTTTGGCCTTAACCATGATCTATATTGTTTGCCATGTGGTTA TGTAAACTTCCCTCTATGTTTGCCATGTGGTTTATGTAAACTCACTGCGGTATAGTCACATGTTACATGAGAAAGTGGCT TAATTTGACCGTTCCAGATAAACTACACGGTTGTAAATGGTAATGTTTTGATTGTATAGCACACAATCAACGTGTATCAG TTAGATGTATAAATTTCCCCACGATTTTGATGTCAAGACAAATTGTAAATTCAATGGTGTATGTATAGAATGGGATACTG TGTGTGCTGAATTGATAGCAATCTTATTTTTTATACTTGGATATGTACCGATACGAGTTTTGTTTGTGATATGGTATTTT ATTTGGGTGGTGTTGATGCACTTCAATTGCATGGCGTGTACCTTCCTACCTGGTTGAATTATGAAACATGCTTCTCAACT AGTGTATCCCGAGTACAACCAGGACTTATATCTTCTAACCTGGGGGAATTGTACCCTCATGCTTGCAGTTGGTTGCATTA ATCTCTAGTTCAACCCAAGTCTTATCAGAAGATGTGTACACTCTTACTCCTTCTCAACTAGGGTATCTATTGATAATG
CDS sequence (LotjaGi6g1v0025800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGTTATATGTGTGATTTTTGTGGGGACCAGAGGTCCATGGTGTACTGCCGCTCTGACGCTGCGTGCTTATGCTTGTC ATGCGATCGAAATGTTCATTCCGCGAACGCCCTTTCAAGGCGGCATTCAAGGACCCTTTTATGTGAGAGATGCAATTCAC AACCTGCCTTTGTAAGGTGCACTGAAGAGAAAGTTTCACTTTGTCAGAATTGTGACTGGGTGGGTCACGGTGCCTCTACA TCTTCAACACATAAGAGGCAACCAATCAATTGCTACTCTGGATGCCCCGCAGCATCTGAGCTATCTTCTATATGGTCATT TGTGGATGATATCCCTTCTATGAGCGACTCTACATGTGAGCAAGAACTTGGTTTGATGAGTATTAATGAGAACCGTGGCG AGAATGGTTGGGTTCCTCCAGAAAACCAGAATGTGTCTGGTTCAGATCAAGGTACTGATTTACCTGGTTCGGATAAGCGC TGGATTGGTACATCTTCAAAGCCTGAGTTAAGCTCTGAACCTCGTGTTCAGGACCAGCCAGCTGGACCTTCAAATGAATA TCTGCCAAAGTTATACTGTCATGCTACAAAATGCGCTTCAATACGTGAAGATGATGATCTGTATGGTGATTTCAACATGG ATGAAGTCGATCTAAATTTTGAGAACTACGAAGAACTTTTTGGTATGGCCCTCACTCATTCTGAATCGCTTTTCGAAAAT GGTGGATTTGATAGCTTGTTTGGGGAAAAGGATGTGTCTCCTGGAGATTCTAATTGTCAGGATGGTATTGCTGCAGAGGG GTCATACAATGGACAGGTCAATGCAGTGCAACCAGCATGCAGCAATACAGCATCTGCAGATTCCGCATGGAGCGCTAAGA CCGAGCCAATTCTGTGTTTTACGCCGAGGCATGGCCAATCAAACCTTTCATTTTCTGGCATTAATGAAGAGATCAGCGGC GGCGACCATCAAGATTGTGGGGCTTCTTCAATGCTTCCCATGGGAGAACCTCCGTGGTTTACACCTTGTTCTGAGAGTAA CCAACATTCGGCCAACCGCAGTAATGCTGTCATGCGTTATAAGGAGAAAAAGAAGACACGCAAGTTCGACAAAAGAGTGA GGTATGCCTCTCGCAAGGCTAGGGCTGATGTTCGAAGGCGCGAGAAGGGCCGGTTTGTGAAAGCCGGGGAAACCTATGAT TATGACCCTTTGAGCCCAACCAGAAGCTACTGA
Protein sequence (LotjaGi6g1v0025800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGYMCDFCGDQRSMVYCRSDAACLCLSCDRNVHSANALSRRHSRTLLCERCNSQPAFVRCTEEKVSLCQNCDWVGHGAST SSTHKRQPINCYSGCPAASELSSIWSFVDDIPSMSDSTCEQELGLMSINENRGENGWVPPENQNVSGSDQGTDLPGSDKR WIGTSSKPELSSEPRVQDQPAGPSNEYLPKLYCHATKCASIREDDDLYGDFNMDEVDLNFENYEELFGMALTHSESLFEN GGFDSLFGEKDVSPGDSNCQDGIAAEGSYNGQVNAVQPACSNTASADSAWSAKTEPILCFTPRHGQSNLSFSGINEEISG GDHQDCGASSMLPMGEPPWFTPCSESNQHSANRSNAVMRYKEKKKTRKFDKRVRYASRKARADVRRREKGRFVKAGETYD YDPLSPTRSY
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 410 | 410 | 4.2E-154 | – | |
| PANTHER | 1 | 410 | 410 | 4.2E-154 | – | |
| ProSiteProfiles | 1 | 47 | 47 | 9.741 | ||
| SMART | 4 | 47 | 44 | 6.1E-9 | ||
| CDD | 4 | 47 | 44 | 1.36747E-7 | ||
| ProSiteProfiles | 43 | 89 | 47 | 9.812 | ||
| CDD | 47 | 89 | 43 | 1.02126E-6 | ||
| SMART | 48 | 89 | 42 | 0.16 | ||
| MobiDBLite | 130 | 184 | 55 | - | – | |
| MobiDBLite | 136 | 153 | 18 | - | – | |
| MobiDBLite | 164 | 179 | 16 | - | – | |
| Pfam | 353 | 395 | 43 | 7.1E-15 | ||
| ProSiteProfiles | 353 | 395 | 43 | 14.882 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Molecular function | Zinc ion binding | Interacting selectively and non-covalently with zinc (Zn) ions. |
Expression pattern of LotjaGi6g1v0025800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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