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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0026300 |
| Transcript ID | LotjaGi6g1v0026300.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | DUF868 family protein; TAIR: AT2G04220.1 DUF868 family protein (DUF868); Swiss-Prot: sp|A4FBX6|ARC_SACEN Proteasome-associated ATPase; TrEMBL-Plants: tr|A0A151SA63|A0A151SA63_CAJCA Uncharacterized protein; Found in the gene: LotjaGi6g1v0026300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:4678273..4680036) extracted from Lotus japonicus Gifu genome v1.2.
CTAGTTGGTGACTTTTTGGTCAAAGAAAAACAAACTTTCGTCTCAATATATCACCCTTTCTTCGCCAAAATGTTCTGGCA AGGCAATTTCTCTCAACTCACCTACAACGCCATTTAGCTGTCACATCTTTTACCTTCATAGTTGTTAACTATTGTTGAAT CCTACCTCAAATTTAGCCATGCAACATCATTGATCTTGTTTCTCCAATTCCATTCATCAATTACCATTGAATATTCCAAG GTGAGATAAACCCAATTCAGCATTTTCATTCATCTTCTAAGGGATGATAAACCCAGAAAAGAATCAAACATTTTAGCTTC AGAGAACATAACCAATACGATATTGGAAATTAAACCATACACATATAGATCTTTTTTTTGTTATGCCAAAAGGGGTTTGA ATACATTGCTCAAATCAAAACTTATTCGAGAAAAACCCCCCTTAGAAACCAAGCATGCATTATGGCTTTCCATCTTTCCT TTAGATCACAATCAGTGTCAAGCTCATATCAAGGATCACCAGTAGCAGAGAGAATAACAGAAGAGCCTCTTCCCAGTAAA ACTGCTCCAAGCACTGTCACGTGCATCTACCAAGCCAATGTTGCAGGGTATTGGAGGAATGTCTCAGTCTTGTGGTGCAA AAGTCCCATGAGCCACACGCTAAACATCATGGTAGATAGCATGAGAGGTCATGAGGTTCATTACACTTTCAAGATTGATG TTAAGCCATGGTTCTTTTGGAACAAAAAAGGGTACAAAACTCTTGAGGTTGATGGCAATCAAATTGAAGTCTATTGGGAT CTCAGGTCAGCGAGATTTTCTGACGGCCCTGAGCCAATAAGTGACTACTATGTCTCTTTAGTGTCTGATGAAGAGGTTGT GTTGTTATTAGGAGATTATAAGAAGAAAGCTTACAAGAAAATGAGGTTGAGACCAAGCGTTGTTGAGGCTTTGCTTTTGG TTAAGAGAGAGAACGTTTTTGCCAAAAAGAGCTTCTCAACAAGGGCAAGGATTGATGAGAAGGGAGAAGAGAGTGACATT GTTGTGGAAAGCTCAACCACGGGGAACAAGGACCCTCAAATGTGGATAAGCATTGATGGGATTGTTTTGATTCATGTGAA GAACTTACAATGGAAGTTCAGAGGGAACCAAACAGTTTTGGTTAACAAGAAACCCGTGCAAGTGTTTTGGGATGTTTATG ATTGGTTGTTTGGTGTGCCTGGCTCAGGGCCTGGTCTCTTCATTTTCAAGTTAGGGCCTTCTGATGCAGAGAGTGACAAA GAGGGTTTTGAAGTTTGTGAGAGTGATGATGGTAGCAGTGGGTACTTTTCAACTCAAAGTTATGCTTCCTTTGAGTCCTG CCTTGTATTGTGTGCCTACAAACTTGAGTAACAAGGTAGAGACCAAATGTTTAATAGTGGGTTACAATGAGTAGCATCAT TGTAAAGTTAGTTGTTTTTTCTTTTTATTTGAGTTTCATGGATGCAACCATTATTGTTCTATAAAGTGGATCAGAAGAAG TGGTTAATAAAAACCAGGATGTTTTGATTCATATTTGCGTTTTTTTATTCATTAGTTTTTATGACATTGTTTAAGGTTTC ACGACATGTTCACAGAATGGAATCATGGAGTCTCACGTTGTTTTATGTTGGAAAGGATATGTTTGAAACAAGTGCAGCCA GTACCCAGTAGTCAAAAGCCCATGTAGTTCCTTTGTAAAACTATATCAAGATGTAAGTATTTGATTGCTTATAATTTTTG TTCC
CDS sequence (LotjaGi6g1v0026300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTTTCCATCTTTCCTTTAGATCACAATCAGTGTCAAGCTCATATCAAGGATCACCAGTAGCAGAGAGAATAACAGA AGAGCCTCTTCCCAGTAAAACTGCTCCAAGCACTGTCACGTGCATCTACCAAGCCAATGTTGCAGGGTATTGGAGGAATG TCTCAGTCTTGTGGTGCAAAAGTCCCATGAGCCACACGCTAAACATCATGGTAGATAGCATGAGAGGTCATGAGGTTCAT TACACTTTCAAGATTGATGTTAAGCCATGGTTCTTTTGGAACAAAAAAGGGTACAAAACTCTTGAGGTTGATGGCAATCA AATTGAAGTCTATTGGGATCTCAGGTCAGCGAGATTTTCTGACGGCCCTGAGCCAATAAGTGACTACTATGTCTCTTTAG TGTCTGATGAAGAGGTTGTGTTGTTATTAGGAGATTATAAGAAGAAAGCTTACAAGAAAATGAGGTTGAGACCAAGCGTT GTTGAGGCTTTGCTTTTGGTTAAGAGAGAGAACGTTTTTGCCAAAAAGAGCTTCTCAACAAGGGCAAGGATTGATGAGAA GGGAGAAGAGAGTGACATTGTTGTGGAAAGCTCAACCACGGGGAACAAGGACCCTCAAATGTGGATAAGCATTGATGGGA TTGTTTTGATTCATGTGAAGAACTTACAATGGAAGTTCAGAGGGAACCAAACAGTTTTGGTTAACAAGAAACCCGTGCAA GTGTTTTGGGATGTTTATGATTGGTTGTTTGGTGTGCCTGGCTCAGGGCCTGGTCTCTTCATTTTCAAGTTAGGGCCTTC TGATGCAGAGAGTGACAAAGAGGGTTTTGAAGTTTGTGAGAGTGATGATGGTAGCAGTGGGTACTTTTCAACTCAAAGTT ATGCTTCCTTTGAGTCCTGCCTTGTATTGTGTGCCTACAAACTTGAGTAA
Protein sequence (LotjaGi6g1v0026300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAFHLSFRSQSVSSSYQGSPVAERITEEPLPSKTAPSTVTCIYQANVAGYWRNVSVLWCKSPMSHTLNIMVDSMRGHEVH YTFKIDVKPWFFWNKKGYKTLEVDGNQIEVYWDLRSARFSDGPEPISDYYVSLVSDEEVVLLLGDYKKKAYKKMRLRPSV VEALLLVKRENVFAKKSFSTRARIDEKGEESDIVVESSTTGNKDPQMWISIDGIVLIHVKNLQWKFRGNQTVLVNKKPVQ VFWDVYDWLFGVPGSGPGLFIFKLGPSDAESDKEGFEVCESDDGSSGYFSTQSYASFESCLVLCAYKLE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 13 | 309 | 297 | 3.1E-158 | – | |
| PANTHER | 13 | 309 | 297 | 3.1E-158 | ||
| Pfam | 35 | 307 | 273 | 2.2E-94 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi6g1v0026300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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