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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0051700 |
| Transcript ID | LotjaGi6g1v0051700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein downstream neighbor of Son; TAIR: AT3G54750.3 downstream neighbor of Son; Swiss-Prot: sp|Q9NYP3|DONS_HUMAN Protein downstream neighbor of Son; TrEMBL-Plants: tr|I1JQC5|I1JQC5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0051700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:9255938..9263347) extracted from Lotus japonicus Gifu genome v1.2.
CCCACATTTGTTTTTTGAAAATACCACATTTTTTTTTTAACTTCCACTACTGGTCTCTCCGGCTCTATTTACGTGCTTGC ATTCCACCGTCGCGCACCGCCGTCGCTGTTCACGTCGCCTGCCAATGCTCGCCTAGTCCGGTCTCATTTCGCGGTGCCTC CGACAAGCTATCCCAGTCCGCAACCAAAAACAACGTATTTTTCGCCGCGTTCGACAACTCTAATTGCCACTTGCCAGCCA CAATCAACACTTCACTTGTAGCCTGTAGGTATATAATGACAATGAGTTTTGATCGGTGAAGCGCTTGCGGTGGTGATTTT TCCGAAACAAGGCATGAAAAACGTACCCACGGGAAGATCCATGGTTAAGAGAAAGACACCGTTAGAACTTAGGGTAAGTA AAAGTTCCTCCCACTTCAAACTCAATTTCTACATGCTAATGGGAATTGCTGCCTTTGGTTATCCAATTTGTTTGAAATTT TGAATCCTCGACAGAAATGCGATTCGAATTCAATTCATTATCGATGTTCAATAATGATTTATAATTGTAGATAATGCATA ATTTGTTCCCTTGCAATAACATTTCATTTTTTAGAGTGAATTATCATTTTCTTATTTCAGGATGAGTTGCATTTCTATTA TTCATCATGTTGTCTGCATTTTATTTCTGATCTTAATTGATATGATGATATGGAGTTATAGTAGTGTTGTTCCAATTCGA GTTCCCGAGAATTATATATGTCTTTCCATGTTGACATTTAGCATTTAATTATGGTGGGGGGGAGGGGATTTCAGATTTCT GATATGTATACATACTTGGCAGGGAGAGCAGTTGAAGCGAGCAAGTCTCAAGGACCTTACTAATGAATCGACACCCCCGC TGGCTAGTTCTACAAAGTAAGTATCTTTTGCACCTCTTTCCGTCCATTGTTTCATAATTTGTTAATGTTTGCTTTGTTTA TGTTAGTGCCACTGAGGGGCGTCGTGGATTTAAGAAACAAGGATCGTTCGAGACTCCTAGATACACTGATACACAACTCG ATGAAGTATTTGCTGCGAAAAAGTCAAGGTTTAGAGTTGCATCCGGAAAGGAAAATGCAAAGGTTATTATATTTTCTCAA CTTCTTACTAATATTAGTTTACTCTATTGATATTTTCATGAGTTGTTGAGATTGAACAAAGTCACTTGTTGCTGTGTTCA GGAAAATCCATGTTTGGGGAAAACTAGTAATCTGAAAAATCTGCTTGGTTTTTCTACTTTGGATGCTAAGAGACAGCAAG GAGCTACATGGTTTGCCTCATAGCTTATATATTTACTTGATCTTGCGGCTAAATTTTCCCTATTCTGATTCTGTTCCTAA TTTTCTCTCAGCTTGACAAATTCTGTTGCTTCCAGTGAGGTGAGAAAAGTTGGTCTATTGCAAGCTTGTCAAACAAATGA AAATTGCAGCCAAGGCAAGTTTCTTAGTGTTGCTGAGATTTCATCTGTTGCTGATAGATCTTCTGGCTTGGCTGCATCTA TTGACATGGTATACAATGGTAACCTCAGACATTTTTTTATCTGTGTGCCTACTTTTAAATCAGTGTAGGCTGTATCATAA ATATGTTACTACTCAAATGTATCTCAGGGCAAAGCACTTAGAGGACTAGCCGCACTTGAACCACGGGTTGATAATGGCTT AGCTGATGATTCATCTGAAAGACGTGGAGATTTGAAATCAACCGTCAAAGGAAGTTTCTTCTCTGAATGTCATGTACCCG GTCAGAAGGCCCCTTTGGATCTTACTCTAAAAACCAATATGAGAATAGTTTCTTCCTCTTCAGTAAATTGGTGAGTGCAT ATGAGAATAGTTTCTTCCTCTTCAGTAAATTGGTGAGTGCATAGGATTGACTAATATCTTGGCATCAAAACTGGTAGGAA TAGTTTCTCCTGGAGTGAGCTAAAAAGCTTACCCTGAAATTCATAGTTTATATTTAAAGGAGGTATTTCTAGGTTTATTT AATGCCTCTATAGTTTATAAAAGATAATTGTGCCCAATGCTGATATAGAGCCTTCCCCCAGTTGGGGTGTTTGAATCCCT CTGAAAAATCGGTTAAGGTGGTATGGGACATGTACAAAGAAGCCCTTCGAAGGCACCGGTGAGAAAGGTTGATAACTTGG TTTTGCAGAGAGGTAGAGGGAGGCCAAAAAGAACTTGGGAAGATGTTGTGAAATATGATCTCATTATCAATAATACCCCT CATAATATGTTTTTGATTGAGCTCAATGGCATAGTGTGATCCATATAGCCGACCTCACTTAGTGGGATAAGGCTTTTGTT GAGAGTCTGATGAAGTCCCTACCAACTGTCGCCACCCCAAGTTAATAGAGTTCTGTCAATATTAAATAGATGTGCTGACA GTTAAAACTTAGTAAATATGACAGTTAAGTTGTGATCCTTTTGCTATGTGTCACATCCACATGTTTATATGAGAATACAA AAGCTATTGCGCTGGGCTATATGATGGGAGTCCTATCTCATGATATTCCACAAAACTGATAAGAAGAATGTTGGCATTTG ATGTGATATGAATATTGTTGATGTAACTAATGCACGCACTATTCATGCATGGTGTATGGTATAACAAGTATTTTTCTTTT GATTTTTTTCCCTAGCTCTCTATATTCTCAATAGTTGAAGGAACTAGGTAGTATATTGCTTACATAATTCTTCCTTTTCT TAGTAACCATGACATGTTAATATTTCATGTTTCTAACATAAAAGTCTGTTTACCACCTACATAAAACAGTTTTCATATAG ACATTGATACCTCAACCAGTAAATAAGACTTCTGTTTATCGCTATTTATGTTGAGAAGCTGTCCTATTTACGTGATTTGT TTGGATTTTTATTGCCCGCATAATTGCCTTGGGCATCCCTCATGTCCTTTTTTGTCTTTAATGAATGCTATTTGTATTTC CTCTTTCAAATTTTCACAATACAAGGTCAGCTATGCGTGGTACCATGAGAGGGTCCAATGGCTTCAAAGATTTGCATTCA TGGATGTATCCCCAATCTGTTCTTCCACCTTCTCTCATATTAGTGTTGAGCCAATCAACTGTTGATGGAGGTAATCAAGC AGCTTTCAATGTAGCCCATTTTAGTTTCTTCTCTGTCCTCTTCCTTTTTATTTCCCTTACATTCCATATTTCCTTTTTAT GCAATAGAATTGGAGTTCTTAAGAAAACGACAAGTAGCTTGGGAAGAATCCTTTCGAGACCTCTATTACATGCTTCGGAA TAACATCTGTGGCCTCTTTTATGGTAATTATTCACGGACGTCTTCTTTTTTATTGGATGAAATTGTACAGATTATCGAAT TATTCAAAGTATGCTTTTTTTATGATCTGTAAATTATTATTTTTGTGTGCAATGAACAATTATCTTGATGAAAATACAGT TTCTTGTATTGATGTAGGTTCCTTTTGTTATTATTAATTCAGACCTGGTTTTGATATATTAGGAACCTTCCAAGTTCTTT GTGCAATATTATGTGTGTTAAAATTTATATAAGAATATTGTATGAGACTTTGTGTTGATTTTACCCCTGCTGTTTTCCAG TTTGCACTTCCCAGTTTGTGGTGATGTTTACCGGTGGTGATAGCTCGAGGAGATCAAAATGCTCTATCAATGCTTATATC TCTCGGTCAACCATGGGTTTAAGATCATTGTTAAAAGAGCATGTAAGCATTACTTGTATAACGTATAATGATCTGTGCAG TTCATCTATAAATTACTAGTCAATCATACAGACAGGGGGCAGGGGAGGTAGTTATTTTTATAATATCTGCCTAAGGTTAA GAATACAATTCATTGATTGCATATTTCTAGGAGAATATCAGTGACAGTGCTACAAGGCATATTACTTCTTTATCTTTTTT TGTTGTAGCATTAGTCTTGTCCTAGGTGCCATTATGCTTCTATGGTGTTGGGTCTTTAAAACTGATGGGGCCATGAAGTT AATAACAGGTCACCTCTTGAGCGTCAATAATGTGTGCAGTTTACTTATTAGCACATATGGTTTATTAGGGTTTTATTTTA TACTGCCGAATCACCAGAACTTCCTTTTCTATTTATGAGGTTTTTCATTTTTCTTTTTGAATTATTATCCTGGAATTTTC TCATTAATATTTTCTTTGGTTATGATTTCTGAACTTACTTTTGGTTGTATCCACTCTTGAACAGGATCTTTGTTTCTATA TGCCTCTCTGCCATTCGAAAGTGGAGCTAGTTGCTACTGAGTCTCTGGCTGAGCTGTTAGAGATAGAGAAGCAAAACTTA GGACAGGTTTGTTTTTTTTTTTTTTTCCATATGTAATTTGCATTTCTATGGGAAACTTCTCAATGATCATGGTAAACAAT TCCCTTACATATTACACCCATCTCTTTGTGATTCTATTGATGAATATGTACGAAATAGTGACTACTGAAACTGCACTTCT TTTTTGGCTCACAGCTAGTATTAACTGTAGTGTTTGCAGGAGTTTATATTAATCTGCTAGTAAAGTATTTTCAAACACCA TCTTCTAGTTATATGCTGTTACCTCATTGAAAGAGTTTGACGCACAAGACTGTTTTAATAATGATAATGTGATAACACAT GATCAGACATAAAAGAGCAACCTGATGCTACAAAGCTCCTGGTATGGCTGATTCTAGGGATTGGACCCTTATGGATCTAT TGAAGCCAGCCTTGCTTTGTATCGTAAGAGGCTGATTCCACGACTTGGACCCAGGAGCTTCTTTGTCACAAGGCAGCAAC TCCAACTATTGCACCAAGGCTCCCCTTCAACACATAATTAGACATCAATGAATTTTTTATTAAAATGTTTTTAAACTCAT GTTGAGATGGATGAAATTTCAATGATTAAAGCATTCAAATACGTGTCCTTCACAAAAATGACATGATACCAGAACTATTT CAAAGTGTCCATGTTTCCTGAATTATGGTAACACTTGATTAGACAATATTTTACAATTTTTTTACAGGTATACTGAATTA AACTCAACTAGTTTATAGATGAAAAGTTAATCAATAAAGGCTTGCAAAATATTATGCCTTCTGCTCTGAAAGTTTATTGT CCAGTGGTTTTTGCTTATTTTCATGTTAATAACTGATTTTCCCATGTGTGCATATATTATGCCTTCTGCTCTCAAAGTTT ATCTACCAATTAACTTGAGAACTGTAGTTAAGTTTATTTATACTGTTTTTATTGATTGGTGCTTTATCATTTGAAATAAT GCAGACCCGACGGTCAAGGTCATTTTCTGATATTGATAATAGCCCGGAATCTTTGTTGGTTTTCAGTGGCAACAACAATG TACATGGTTTATATGACCTCTTACTTAATTATAGGTGACTAATTAATGGTTAACTTTCTTGGTGGCTTCCTATCCAATTT CCATACGCCATTGACTTATACTTGTTTGATGTTAACACTCGTACTTTTAATCTTGTGGCGGACTAACTTTTATTACCTGT ATTTTGCAGAATTCTCTGGACCTCACTGTCTGGTGTGGATGTACCTGTCTTGTGCTCTCCCGTGCCCTTTCAAAATTCTG CTTTGTCTTCTCCTGATGTATGTTAATAAATTCTTGACTTAATTTTCTCTTTTTGTTCTTTCCATGTTGTGTTTCTGCAA TTTGTAAATACAAGTGCATTATTGAACTATCGTACCAATCCTTTTACCTAAGTTACTTAAGTCAGAAATTTTGTTACCAC TTTCAGTGTTATTTCTTATCGTTGAGTTGTAAATATTGTTAGTAGTTGCTTAATTTTTCATTTGTGCATGAGTCTAGTAT CGATGAATCCTCCATAAAACAATCTAGAGGAATCAATTGTTTGAAAGTTATAATTTATTTTTGTACAATTTGTTTAACGC TACAGACTTTATTTTTCTTTTACCCAGCTATCTAATAATACATATTGGAATCTGTATCTTCTCTTTCTCAGATTAAATGC ATGGAGACAAGAAGAGCTGAACATTTTGCTGCTTCTTGTAACAAGTCTATTTGGAAAGATGGTGAGTCTGCACCGAGATC ACCAGATGGCCTTTGTTATAGCATTGAAATTAAGGATGCGCTTCTTCCACCTTGGATTATTTGTAGCATATGTGCATTGA TGAGCTCTGAAGGGAGAAGCTTTGAGGCAAGGTATGAGTAGACATTGCTTGGTGATACTTGTTAAGTTGTTATAAATGAA TTGTTTAGATCGAATAGAACTGATGTGTTCAGCTCTGGTAATCCTAAGCACAATGATAGAACTTACATAGTTACATGATC TTGAGATATTTCATCCTACACATCCTGGCATCAATCTCCACTACATTGAGATACCCTTCCATAGTGGTGCTTCACTGTTT TGACATGCCAGTTGGTCTGAGTATTTATTTATGTTGCGATGCTATGGATTTCCCTTGAAACACCAAAGAATTAAAACTAG GTGCATGTTACCTAGTTATTTGAGGCCTAAATGATGTTTGGTTTGTCTTGTGATACAGTTTCTTGACAGAACCTCGCTCA GTTGGCTTGAATATTGCTTTAAAACCAACTTCTGAGAAGTGGGAATATAAAGTTGCCGGTAGTGAGAACTCGCAAGACTG CAGTGATACATTTGGCATTGCAGAAGCTGTAGTCACGTCTTGCTTGTCGTCATGTTCACTCAAAAGCTTAAAGTACTGTG AAGGTTCATATACGGGATCACTGTCCCCTGTATAATTGTATCAAGCAAGAGGAACTTAATTTTCTCACATTAATGGCTAG TCTATTTATAGTATATTAATTCTGAGATGCTAGGTGTGATAGGAATTTGGCATGCTATGCGTCTGGTTCATTTAGCTGTC AAGGAATCAAGAAATAATTCTATAAATGTAAGCATGGACGAAACTTTGGAATTGATTGAAGTGGGCATCATGGGTTGGTT GAATGCAAAGGTCCCAGGTTTTGATCACTCTTTTTGTAATTGGTGTAAGATTCCTATGGATGGCCTGCTATAATTGTTTA TGATTTTGTGGTTTTGATATAGCACCTTCAAAAGAGAATTCAATCAATCAAAAATCTATGTCATATTTGATTTATATCAT CTATCTGAAATGTGGATCAGCAACATCAGTTGTAACTAAATATTTCTTTAGAAAGAGATCTTGAAAGTTCCCACTGTAAC AGCATCCTAGTAGGAAAGTTAAGTCCAAGACATTTAACAAATTTCTCCTGCAACCAATTAAGTCATCGAATACAAATGCA AAATACAAGCTAAATCCATATTTGAAGTACTAAACAAATGGAATATCAGTAAATTTCCAGGAAATTAGGACTGATATATC AAAGATCATTTCATTTGCAAGATAAGTACAAGTATACAGTTGCACGTTGC
CDS sequence (LotjaGi6g1v0051700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAAAACGTACCCACGGGAAGATCCATGGTTAAGAGAAAGACACCGTTAGAACTTAGGGGAGAGCAGTTGAAGCGAGC AAGTCTCAAGGACCTTACTAATGAATCGACACCCCCGCTGGCTAGTTCTACAAATGCCACTGAGGGGCGTCGTGGATTTA AGAAACAAGGATCGTTCGAGACTCCTAGATACACTGATACACAACTCGATGAAGTATTTGCTGCGAAAAAGTCAAGGTTT AGAGTTGCATCCGGAAAGGAAAATGCAAAGGAAAATCCATGTTTGGGGAAAACTAGTAATCTGAAAAATCTGCTTGGTTT TTCTACTTTGGATGCTAAGAGACAGCAAGGAGCTACATGCTTGACAAATTCTGTTGCTTCCAGTGAGGTGAGAAAAGTTG GTCTATTGCAAGCTTGTCAAACAAATGAAAATTGCAGCCAAGGCAAGTTTCTTAGTGTTGCTGAGATTTCATCTGTTGCT GATAGATCTTCTGGCTTGGCTGCATCTATTGACATGGGCAAAGCACTTAGAGGACTAGCCGCACTTGAACCACGGGTTGA TAATGGCTTAGCTGATGATTCATCTGAAAGACGTGGAGATTTGAAATCAACCGTCAAAGGAAGTTTCTTCTCTGAATGTC ATGTACCCGGTCAGAAGGCCCCTTTGGATCTTACTCTAAAAACCAATATGAGAATAGTTTCTTCCTCTTCAGTAAATTGG TCAGCTATGCGTGGTACCATGAGAGGGTCCAATGGCTTCAAAGATTTGCATTCATGGATGTATCCCCAATCTGTTCTTCC ACCTTCTCTCATATTAGTGTTGAGCCAATCAACTGTTGATGGAGAATTGGAGTTCTTAAGAAAACGACAAGTAGCTTGGG AAGAATCCTTTCGAGACCTCTATTACATGCTTCGGAATAACATCTGTGGCCTCTTTTATGTTTGCACTTCCCAGTTTGTG GTGATGTTTACCGGTGGTGATAGCTCGAGGAGATCAAAATGCTCTATCAATGCTTATATCTCTCGGTCAACCATGGGTTT AAGATCATTGTTAAAAGAGCATGATCTTTGTTTCTATATGCCTCTCTGCCATTCGAAAGTGGAGCTAGTTGCTACTGAGT CTCTGGCTGAGCTGTTAGAGATAGAGAAGCAAAACTTAGGACAGACCCGACGGTCAAGGTCATTTTCTGATATTGATAAT AGCCCGGAATCTTTGTTGGTTTTCAGTGGCAACAACAATGTACATGGTTTATATGACCTCTTACTTAATTATAGAATTCT CTGGACCTCACTGTCTGGTGTGGATGTACCTGTCTTGTGCTCTCCCGTGCCCTTTCAAAATTCTGCTTTGTCTTCTCCTG ATATTAAATGCATGGAGACAAGAAGAGCTGAACATTTTGCTGCTTCTTGTAACAAGTCTATTTGGAAAGATGGTGAGTCT GCACCGAGATCACCAGATGGCCTTTGTTATAGCATTGAAATTAAGGATGCGCTTCTTCCACCTTGGATTATTTGTAGCAT ATGTGCATTGATGAGCTCTGAAGGGAGAAGCTTTGAGGCAAGTTTCTTGACAGAACCTCGCTCAGTTGGCTTGAATATTG CTTTAAAACCAACTTCTGAGAAGTGGGAATATAAAGTTGCCGGTAGTGAGAACTCGCAAGACTGCAGTGATACATTTGGC ATTGCAGAAGCTGTAGTCACGTCTTGCTTGTCGTCATGTTCACTCAAAAGCTTAAAGTACTGTGAAGGTTCATATACGGG ATCACTGTCCCCTGTATAA
Protein sequence (LotjaGi6g1v0051700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKNVPTGRSMVKRKTPLELRGEQLKRASLKDLTNESTPPLASSTNATEGRRGFKKQGSFETPRYTDTQLDEVFAAKKSRF RVASGKENAKENPCLGKTSNLKNLLGFSTLDAKRQQGATCLTNSVASSEVRKVGLLQACQTNENCSQGKFLSVAEISSVA DRSSGLAASIDMGKALRGLAALEPRVDNGLADDSSERRGDLKSTVKGSFFSECHVPGQKAPLDLTLKTNMRIVSSSSVNW SAMRGTMRGSNGFKDLHSWMYPQSVLPPSLILVLSQSTVDGELEFLRKRQVAWEESFRDLYYMLRNNICGLFYVCTSQFV VMFTGGDSSRRSKCSINAYISRSTMGLRSLLKEHDLCFYMPLCHSKVELVATESLAELLEIEKQNLGQTRRSRSFSDIDN SPESLLVFSGNNNVHGLYDLLLNYRILWTSLSGVDVPVLCSPVPFQNSALSSPDIKCMETRRAEHFAASCNKSIWKDGES APRSPDGLCYSIEIKDALLPPWIICSICALMSSEGRSFEASFLTEPRSVGLNIALKPTSEKWEYKVAGSENSQDCSDTFG IAEAVVTSCLSSCSLKSLKYCEGSYTGSLSPV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 61 | 61 | - | – | |
| PANTHER | 8 | 591 | 584 | 1.8E-168 | ||
| MobiDBLite | 13 | 29 | 17 | - | – | |
| MobiDBLite | 30 | 51 | 22 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi6g1v0051700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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