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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0067900 |
| Transcript ID | LotjaGi6g1v0067900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Plant/T7H20-70 protein; TAIR: AT3G55646.1 TPRXL; Swiss-Prot: sp|Q9C0B2|CFA74_HUMAN Cilia- and flagella-associated protein 74; TrEMBL-Plants: tr|A0A0L9U963|A0A0L9U963_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0067900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:12973833..12977377) extracted from Lotus japonicus Gifu genome v1.2.
ATTGAATGAAGGCACATGGGCGCAGCATATTTTTGGGGCTTATAAATAGCCCCTAATTCACTACAATTCATGTCCCAACA CATCTAACTGCTCTCATCACGTGCTCTCCTATACCTCCTTCTTCACTCCTCTCTCTGCACCATTCTGCCTAGTTATCTAT CTCTTTTGTTGGCTTCTTCCCTGCAAACCTTATCCAATCTTTTGGGTCGTTACAGGATTTATTCTAGTAGTTTTGTTCGT TGGTTGACAAAGAAATTAACCCTCTCTCTCCATAAAACTTTAAAGCTTTTGATACTGTAACTCACACACTACACCACAAG ACATGGACAACAACAACAACAGAAAGAAAGTTGGAGGAGGTTCAGGTTCTTCCTCATCTCCTACCAATTTTGATCATCTT TTTGGTCCAAAAGATCCCTCCACCATTTCATCTTCCACATCCAGCATCTTTGGCTCCATGTTTCCACCTCCATCCACTGT AAGCATCACCTGATCACCTTTAATTCCTCCCTCGACTTTGTTATTATTTTCTATGTATTTATATATATGCATGGATTCTT TTGCTTCATTGCCTGCCCTACATGTTTCCCCTTTTAACTTTTTCTTTTTTTCCAGATTGTGAGTTTGTTTTGGTAGCATG AGATGAGATAGTTATTGTTTCTGACTTCACCCATAGGCCTTTTTCGGGAATATGAGAACTTTAGTGCGTTGGAAATAACT TATAACTACTAACTGATAACTACTAGACTGTTTTTTCTTTCTTGGAATCTCCACGGACATACAGTAGCTTGAAGTTAATT AATACTTGGACTAGAAACCACACAGACCAGGATTAGTTCAACACTTCCCAAATCAATAACTTTAGAACTCCAACTCTTAA AAGTTACTCTCTCAGACGCTCATCTGTTTCTGGTTTTTTTTAGGCAATTAGAAATATATTAAAATGAAGTACAAGGGTTA CTCAACTCAATGCAAAGAATAGAGAGGATAAAGAAAAACTAAAAGCAACATCAATAGGTACAATAGACAAAGGATTCGTC TAAAACTAAGACAAACCAACCCCCAAATCTCCCACCCCTTGAAGAAAGATATATTAGATACATATTAAAGAGTGTAATTA ATTTTATTAATTTTCATAAAAGAAATATATATTTTTCTATTTTATCTTGTAAAATATATTTTATATTTTCTCATTTATTA TTCTCACAATAACATTCCTAAAAAAATATTAATTAATTTTCTCTTAAAATTTTAAATTGATAGGTATGAACAATCTTTTT CTTCCAAATTAACAGTTAATAAGAAACAGAGAAGAGAGTATTCCCTCCGTTCTTAATTAAATGTCCGGATAAAGAATAAA CATCAATTAATGTTATTCTTGATGTAATGCTTTCAGTTCTTGATTTTAAACCAAAAATTGAAAGGAACTCTTGATGACCA ACAAAAAACACACTATTTTTATTTATATGTAGAAATTTTTAAACAACTGAAAATTTTAATGTGATTAAAAGAACAAATAT ATTATAATTTTATCACAAAAGACGTATTTAACTCGGAAGTTTTTTTTATCTTATGAGAATGAATAGTCATTTTATAAGAG AATATAAGAAAAAATGATAATCTTTAGATCCAATTATAAATGATTAAGATTAAAACATTAAGTCATATGACTTTTTTTGA TAGCTTTAAGTAGTCACGTGACTATCTCATGACTATATATTAAATTGTTTTCATCTTTGATAATTCATAATTAAATCTAA CGGTCATTATTCATTCATATATTCTCATATAAAATGATCATTCTATAAAATACCTTATCTATGTCATGCGTAGGGGATTT ATCATATATATGAGAAATGAATTCTTATCAATTTATTTTTTTTAAATTAATTCTGGCACCAAAAAGTTATTTAATTATAT GAGTTTCTCCTTCAAATTAATTTTATTGTTAAAATTAATTATAGAAAAAAATTCCAAACTTAACCATTTTACACTTTGTG ACTTTAGGCTGGAAGGAGAGATCCAATAAAGCAGGACATGGGAACCAAAAATTATGGAGCACCAGGTTCGTTAAACTTCT TTGACTTGTAGTACTATAAATATGCCATATTCAGTTTCAGCTCAGCCCATCTCAAAATCTTGTCTACATACAGGGAACAT GTAGCTTTTTCAACTCACTTTAAATGTCTGGGCTTATTTAGTAAAGCTTAAGTTTGGATTCCTTCCTTTCAGGTAAAGGT GAAAGCAGTGGTGGCACCTCTAACAGGAATAACACTAGTACCAACTATCAGAATGAAACAGTGGAACCCAGCTACTACAG CTCATCCATCTATTATGGTGGTCAAGAAAATTATTCCCCCAGAACCAGGACCACTGAATCCCAGCAAAATGTGAGTGCCT TTAATTCTCATTCGGATGTCGAGTATTCCGAATCCGGGATTTAATCACAATTAATATTCTTCAGTCTTCAACACTTATCC AAATGTATTCTGCGGCAATTGAGTCTGAGAGCTCTTACCGCATATTTATCATGCGTTGCCAACTAAGTTATTAATTCTCA TTCTTTGAGTCAATGGGTTTTGTTTCACAAAACATTAGTTAATTAAATATCCGCACACAATAATTAAGTTCATGTTCTTT TTATCATTATTATGCAAGAAGGATTTCTAGGGTGCACCACCTAAATAATTGTTGGTTTATATGTTACAATTAAGCATAGC ATAAGGGATATAACACATTTGGCTTGTTTGCAGTTCAAGAAAGATAAGGATGACGATGATTCTAATGGAAACGATTCAAA CAGTGCTTCAAGAGGGAACTGGTGGCAAGGTACTATTGAAGAAATACTGATAATAAATTAAATTAGACATTTAACTGATT TAAATGAAACACACTTTACTACTTTATTATTTTCGGTTTCTGCAGGTTCCCTTTATTATTAACATCATAATATCGATCAG AGTGTAAACTGACCATCCTGCTGATGAGGTATTGAAATTATGATCATATAATATTCATATTTAAGCAAGGAATTTGAATT CTTCAACCCTATCAAATTAAGTTTGAACTCAACTTACTGAACATGGATTTTTTTCGACAATGTTGCAGGATGGTGATCAA CCACATACGTTGTATAATAAGCAGTAGCAGTACTCTAATTAACAGTAAGGAAATAAGACACGGTAGTGCAGAAAACGACT CTAGTAGTGTTTTGGCGACATGTGTTGGGTCTTTTTAGTCACAAGCAAGCTCGCACACAAAGGTTAATTGCACAGAAGAA GTCAACCCTCAGCAGCAGCTTGGAGCATGTTGATTTTGTTGTTTTTTGTTTTTTGTATTTTACAAAAAAGGTTTCATGAG GGTATAACTGACCTTTAGTTTTAGTGTGTTTTGTTATAATCATGTGACGATGTTACATGATTTTGATATGGTTTGTACTG GTTCTATCTATATATATATATATATATTATAGTATATAGTATGTATATTGATTAGTGTGACTTATAACTCTCGCGAAGAC TTCGGTGATACGTTTATTAAGTGAA
CDS sequence (LotjaGi6g1v0067900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGACAACAACAACAACAGAAAGAAAGTTGGAGGAGGTTCAGGTTCTTCCTCATCTCCTACCAATTTTGATCATCTTTT TGGTCCAAAAGATCCCTCCACCATTTCATCTTCCACATCCAGCATCTTTGGCTCCATGTTTCCACCTCCATCCACTGCTG GAAGGAGAGATCCAATAAAGCAGGACATGGGAACCAAAAATTATGGAGCACCAGGTAAAGGTGAAAGCAGTGGTGGCACC TCTAACAGGAATAACACTAGTACCAACTATCAGAATGAAACAGTGGAACCCAGCTACTACAGCTCATCCATCTATTATGG TGGTCAAGAAAATTATTCCCCCAGAACCAGGACCACTGAATCCCAGCAAAATTTCAAGAAAGATAAGGATGACGATGATT CTAATGGAAACGATTCAAACAGTGCTTCAAGAGGGAACTGGTGGCAAGGTTCCCTTTATTATTAA
Protein sequence (LotjaGi6g1v0067900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDNNNNRKKVGGGSGSSSSPTNFDHLFGPKDPSTISSSTSSIFGSMFPPPSTAGRRDPIKQDMGTKNYGAPGKGESSGGT SNRNNTSTNYQNETVEPSYYSSSIYYGGQENYSPRTRTTESQQNFKKDKDDDDSNGNDSNSASRGNWWQGSLYY
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 154 | 154 | - | – | |
| MobiDBLite | 1 | 24 | 24 | - | – | |
| PANTHER | 5 | 154 | 150 | 2.0E-58 | – | |
| PANTHER | 5 | 154 | 150 | 2.0E-58 | – | |
| MobiDBLite | 31 | 47 | 17 | - | – | |
| MobiDBLite | 74 | 120 | 47 | - | – | |
| MobiDBLite | 121 | 137 | 17 | - | – | |
| MobiDBLite | 138 | 154 | 17 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi6g1v0067900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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