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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0072300 |
| Transcript ID | LotjaGi6g1v0072300.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Proteophosphoglycan; TAIR: AT2G40070.1 flocculation FLO11-like protein; Swiss-Prot: sp|Q9Y493|ZAN_HUMAN Zonadhesin; TrEMBL-Plants: tr|V7D1G9|V7D1G9_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0072300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:13728402..13733571) extracted from Lotus japonicus Gifu genome v1.2.
TTATGGCAAATGTTCCTAGTTTTGGCTGCAAAACCAAACCACACCGTTGCAAGAATTCAAAAAGAGGAAGAGAGAGGGTC AGTTTCGTCATTATCTCACTTCACCTTGAAACGTGGCGTTAAAAGACAGGAACAACAGAATCTAAACGGTGTCATTTTCT CCATACATTCCCCATTTTGCACGTCAACATTCACTTTTATTACCACTCTCTGCCACTCCCTCTTTCTTTTCTCTCACCCC TCTCTCTCCACCGTCAAACTCAAACTTCCGATCTCTCTCTCTCTCTCTCTCTCTCTCCCACGCGCTCTCTCTCACTCTCT CCTCTGCAACACTACAATGGCGTTCTCCACAACACGCTTCGCTTCTTCCTTTCTCTAACCATGACAATGGCGTTTGCTTC GAGCTTCTAGCGTTTCGTTTTTCCGTACAGATTTGAAAATTTTCCGACCGATTCAGCGGTTTTTTCAACTCTCTCCAACT CGTTGTCACGGTGGATTTGGTGTAGTGAAACCAGTGGTGATTGGTTTTGGTTTTGGTGAAGTGGAGTGGAACTTAGTTGA AGCTTTTCAGGTTGGGGTTTTTGAATTTTGAGGGATTTAGGGTTTGTGCGGTTTGAAATTTGAGGATGAATCGTAGCTTC AGGGCTCAGGAATCGCAAATGCAAGCTGCGTTGAAGCAGAGGGAGCAGCAGTTTGGGGGTTTGAGGGGTTCTGTCATGAA GGAGAAGGATGAGGAGCTCGCATTGTTCCTTGAGATGAAGAAGCGTGAGAAGGAGCGGAATGATCTTCTTCTTCTCAACT CGGATGAGCTCGATTCACCTTTGGGTATAGATTTTTTGCTCAAAAAAGTTATCTTTTGTCTTGTTTTGTTTGTGTTGGCG TTTTGGGGATTTGGTTTTTTTCGTTGTTTCTTTAGTTTACTTGACTTAGATTTGCTTGTTAGTGTTAAATGATTGTGTTG TTGAAGTAGTGCAGTTTATGAATATGAGGGGTTTTGTTGTTGGTTTGGATTTCTTCTTATCACATTATGTTTCATGGTTG CAGGGTCAAATCCCAGCACTTCTTCCATTTTCAACATTCCAGCGTCTGCGCCGATTCCTGTTCGGAAGAATGGTACTGAT GACTTTCTCAATTCAGAAAATGATAAAAATGACTATGACTGGTATGTATGTAGAACCCTTTTTGTTGGGGCATTTCAATC TTATGTTTTCTTCAACATGTTTAGCTGGCCGTTGTGTTTACTAGTGCAATAGATGAGTTTTTGTGGTCTTGACTGCATAA ACAATTATAGGATATAGTTCCTGGAACATCTTCTTATGAAAGAAGTCCTGCTTTCTAGGCAGGGAAAAGCTATCCATATT TGATTTAATTTGATGTGCATTTAATCCAAACTTTCTGTAACTCGTTAAAATCCAAAGGTGTATGCACCCAAACTTTTTCA CTTTAAAGATAAAGCTCACTTTAGAGTTGCTTTATCCCTCTGGGGCTATTGTGGGCTGTACATATTTATTGAACATTCCA GTTTTTATATGAAATAAAGCATTCCTTTCTCTTGTTATGGTCCTTAACTCCTTATGGCTTTCTTTTTCAATTTGAAAGAG TATTGTTCTAGTATGAGTATCTGACCTTTAATTTCATACATAAGCACTATTGTCTGATCAGTCAGACTCATGGTATCATT CTTAATATCACCTGCTTCTGCTTCCATATTACTGCTCCGGCATCACATTTTCATTATTGCAGATACTTAAGTGTTTTTTT TCTGCTACCTATGTATGTAAATATAATTGACCTGGGTTGTTAATGTTGCTAAGAAATGTTAAGCCAGTGCAATTGATTCA GTGGTTGCTATTCAAATTGACACTTAGCATGGTTAATTTTTTTCAGGCTTCTAACTCCTCCTGGTACTCCTCTTTTTCCT TCGTTGGAAATGGAAAGTCGGAAGACTGTTATGAGTCAGCTTGGAAGTGGTAACCCAGCCTCGCGCCCAGTAGCATTAAA ATCCAGAGTAAGCATTTTGAATGAAGCTTTCATATCATGTCAATTGTTTTATGGTAATTGGCAGTTGTATGTTTTATGTC TAGATAGTTTGAGTAGCTAATGTAAATAGAAAGTTCTTGGCTTTGGGAAAACTCTTAAAAATATAATTTCTATTAAGCAG CATGTGGTCTTTAGAACAAATTTCAGTGCTCCCTTAGCAGTAAAGATTCAGTACATTCCCTTTCACAAATATGACAGTTA ATCTCCTTTTTATTTTAAACTTTTTATTTAAAAAATGGAAAGCGTAATAACTCACCATACGTGTGTGGTCTTGGTTTAAA GTGGGGGAGTATGTACTATGAGAGTATTGAGAAAGATTTGATGGTCTTGATATGTGATTTGCTTAACAAGTGACAATAGT CAAAAGAACATGCCACTTACTATTGTCTATTTTCAGCTCCTTTATTATTGTATATTTTTAGCTGATGTTGCCTGCCTATA TATAACTTGTTGGCTTACACAGTACACTTCCCCTCGGCAATAATATCCTTGGACTACCTAAACTTGGTTTCTCATAGTGC ATGTTTTACAGATTTGTCATTTCATGTTTTAAATGATTTATATCTTTATTAAGTAAGTATCACGTTACATCAAATATGTA TTGAGAATTTGAGATTCATAGGTATCATTGAGTAAAATGATCATTCTTGGTTTTTTTTTACTTCTTATACTGATTTAATT TATGTTCTTTATCTTTTTAGTGATTTCCAAAGTAAGGATCTGTTAGTGCTATACTGATATTTTTAATTTTGACAGAGCCG AGTGGTATTGATTTAGCCATGTAGATGATCTCAACTAGTGTCAGAAATTATTTTTTCTTAATTTTATTTCCTTTTCATTA TAGTTGGGAAATCATCAATCAGAGCCTGCTGGGAGGACTAGCTTAGTATCTAAACAATCAACTTCTTCCCCTGTATTGAG CTCTTCAAGTGGTGGAACTAGGAGGCCCTCATCATCTGGGGGTCCCGGATCACGACCTGCAACTCCTACTGGACGCTCCA CATTGAACACTGCTTCAAAACCATCAAGACCTTCTACACCTACTCGGACTATGCTACCTTCTAGGACCATGGCAGCTCCA TCCAAGACCACAATTTCCACAACCAAGCCTGTAGTTTCTTCCACTAAGCCTTCGACTTCTGCAACTAAGGCCACAGTCCC TGCAGCGAGATCCACAATTCCATCAAGATCCTCTACACCATCAAGATCTACTGCTAGATCTTCGACACCAACTAGCAGAC CTACTTTACCTGCTTCCAGGTCCACATCAAGAGCATCTACTCCAACTCGGCGACCATCTACCCCATCAAGTGAACACAGT ATATCAGCTCCTTCAGTTAAGATTTCTTCAAGCCCCAAGCCAGCTCCTGTGACAGCAAGGCAGCCAACTCCTGTGAGAGG AAGGCAGCAAGCTCCTGTGACCTCAAGGCAGCCAACTCCGACGACCTCGAGGCAGCCAGCTTCTGTAACCTCAAGGCAGC AAGCTTCTGTGACCTCAAGGCAGCAGCAGCCAGTGCCATCACGTGGCACTTCACCAACAGTGAGATCACGACCATGGAAG CCATCTGAGATGCCAGGTTTTTCACTCGAAGCTCCACCCAATTTGAGGACAACACTACCTGATAGACCACTGTCTGCAAC TAGGGGCAGGCCTGGAGCACCCACTTCTCGGTCTTCATCTATTGAGCCTTCTTCTAGTGGAAGACCCAAGCGACAATCAT GCTCTCCTTCTAGAGGACGATCTTCCAATGGCAGTGTTCATATCAGTGGAAACTCAATGCCAGCAGTTAACCGTGGATAC TCCAAAGTGAATGACAATGTCAGTCCTGTTGTAATTGGCAACAAAATGGTTGAGAGGGTAATTAATATGCGAAAACTAGC ACCACCAATGATGGATGACAAAAACTCTCCCCGTAGTAATCTGTCTGGCAAGTCATCATCTCCAGATAGTTCAGGTTTCG GAAGAACACTCTCAAAGAAGTCCTTGGATATGGCTATTAGGCATATGGTACGCATCTTCTCCACATTCTATTAGGCATAT TGTTCTAACAGATGAAAATGATATTGTGATGGCATACCTGCATATAAATCCCTATTCTTTCTTGTCATGTAAAAGTTGTC TTGAGTGTAAATTGCTACTAGTTGCCTTGCATGCATGTTATTCCAAAATTTAGAGAATTGAGTTTTTCTTTTTCTCTTAT TACCTTAATGGCTTAATCTAACTGAATGATCTTTATTAAAAAATGATTGAACTGATTAGAACTTATTTATACAGTTCCGT TTCTCATCATTTTGCTTGTTTCTGTTGAATAGGATATAAGGAGAACTATTCCAGGCAATTTACGGCCATTAATGACAAAT ATTCCAGCATCGTCTATGTATAGTGTGAGGTCTGGACCTCAGCGTGGCCGAAGTCGAACAGTTAGTGCTTCAGACTCTCC TCATGCAACCAGCAGTAATGCCAGTTCTGAACTGAGTGTAAACCAAAATGGTATTTGTTTAGATAGTAGCGAAGTAGATG ATGATATTGGCAGTGAGAGATGTGGTCAATCTCCTGCAAGTGTACGGGGCAGGTAAACTTATCTGTTTTGGGGAACCCTG CATATATTTAAATAGCACCAAGGCTCTTATCCTGAGTTTCAGCCATATTGGATTTACATATGGAGCTAACCATGCTTGTA TGATGAAAAGCTTATTGGAAGTGATATAACCTCATGTAATGGAAGGAATCTCTAATTTCAGGTAGATCGCTTGTTGTTGT GGCAATTCTTATTTTTTGAAGCAAAAGGAGGTTTATCCTCTATTTATTTAGCAACCAGAAGCCATACTTATCCTTATGTC AGTTCAGGTGCTCGGAAATTCACCTTGAGTGCATTAGGCTTCACTTTTTCTTTGTTTAGAAGTTATGAGCTAAGTTCACT AAATAGGAGGTGTTCAACAACTAGGAATGAGACTAAAAGTTGCTAAGTTAGATAAGAACTATATCCTCAACACCTCAAGA GACGTTTGTAGCTATTTACCGCCATTATGAAGTTTGTTGGCATTGAATAGATTCTAGTACAATATATTTTCATCTCTTAC AGAAGAGAAATATCTTTTAAATAAAATTAAAAAGTAACTTTTTATGAAAA
CDS sequence (LotjaGi6g1v0072300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAATCGTAGCTTCAGGGCTCAGGAATCGCAAATGCAAGCTGCGTTGAAGCAGAGGGAGCAGCAGTTTGGGGGTTTGAG GGGTTCTGTCATGAAGGAGAAGGATGAGGAGCTCGCATTGTTCCTTGAGATGAAGAAGCGTGAGAAGGAGCGGAATGATC TTCTTCTTCTCAACTCGGATGAGCTCGATTCACCTTTGGGGTCAAATCCCAGCACTTCTTCCATTTTCAACATTCCAGCG TCTGCGCCGATTCCTGTTCGGAAGAATGGTACTGATGACTTTCTCAATTCAGAAAATGATAAAAATGACTATGACTGGCT TCTAACTCCTCCTGGTACTCCTCTTTTTCCTTCGTTGGAAATGGAAAGTCGGAAGACTGTTATGAGTCAGCTTGGAAGTG GTAACCCAGCCTCGCGCCCAGTAGCATTAAAATCCAGATTGGGAAATCATCAATCAGAGCCTGCTGGGAGGACTAGCTTA GTATCTAAACAATCAACTTCTTCCCCTGTATTGAGCTCTTCAAGTGGTGGAACTAGGAGGCCCTCATCATCTGGGGGTCC CGGATCACGACCTGCAACTCCTACTGGACGCTCCACATTGAACACTGCTTCAAAACCATCAAGACCTTCTACACCTACTC GGACTATGCTACCTTCTAGGACCATGGCAGCTCCATCCAAGACCACAATTTCCACAACCAAGCCTGTAGTTTCTTCCACT AAGCCTTCGACTTCTGCAACTAAGGCCACAGTCCCTGCAGCGAGATCCACAATTCCATCAAGATCCTCTACACCATCAAG ATCTACTGCTAGATCTTCGACACCAACTAGCAGACCTACTTTACCTGCTTCCAGGTCCACATCAAGAGCATCTACTCCAA CTCGGCGACCATCTACCCCATCAAGTGAACACAGTATATCAGCTCCTTCAGTTAAGATTTCTTCAAGCCCCAAGCCAGCT CCTGTGACAGCAAGGCAGCCAACTCCTGTGAGAGGAAGGCAGCAAGCTCCTGTGACCTCAAGGCAGCCAACTCCGACGAC CTCGAGGCAGCCAGCTTCTGTAACCTCAAGGCAGCAAGCTTCTGTGACCTCAAGGCAGCAGCAGCCAGTGCCATCACGTG GCACTTCACCAACAGTGAGATCACGACCATGGAAGCCATCTGAGATGCCAGGTTTTTCACTCGAAGCTCCACCCAATTTG AGGACAACACTACCTGATAGACCACTGTCTGCAACTAGGGGCAGGCCTGGAGCACCCACTTCTCGGTCTTCATCTATTGA GCCTTCTTCTAGTGGAAGACCCAAGCGACAATCATGCTCTCCTTCTAGAGGACGATCTTCCAATGGCAGTGTTCATATCA GTGGAAACTCAATGCCAGCAGTTAACCGTGGATACTCCAAAGTGAATGACAATGTCAGTCCTGTTGTAATTGGCAACAAA ATGGTTGAGAGGGTAATTAATATGCGAAAACTAGCACCACCAATGATGGATGACAAAAACTCTCCCCGTAGTAATCTGTC TGGCAAGTCATCATCTCCAGATAGTTCAGGTTTCGGAAGAACACTCTCAAAGAAGTCCTTGGATATGGCTATTAGGCATA TGGATATAAGGAGAACTATTCCAGGCAATTTACGGCCATTAATGACAAATATTCCAGCATCGTCTATGTATAGTGTGAGG TCTGGACCTCAGCGTGGCCGAAGTCGAACAGTTAGTGCTTCAGACTCTCCTCATGCAACCAGCAGTAATGCCAGTTCTGA ACTGAGTGTAAACCAAAATGGTATTTGTTTAGATAGTAGCGAAGTAGATGATGATATTGGCAGTGAGAGATGTGGTCAAT CTCCTGCAAGTGTACGGGGCAGGTAA
Protein sequence (LotjaGi6g1v0072300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MNRSFRAQESQMQAALKQREQQFGGLRGSVMKEKDEELALFLEMKKREKERNDLLLLNSDELDSPLGSNPSTSSIFNIPA SAPIPVRKNGTDDFLNSENDKNDYDWLLTPPGTPLFPSLEMESRKTVMSQLGSGNPASRPVALKSRLGNHQSEPAGRTSL VSKQSTSSPVLSSSSGGTRRPSSSGGPGSRPATPTGRSTLNTASKPSRPSTPTRTMLPSRTMAAPSKTTISTTKPVVSST KPSTSATKATVPAARSTIPSRSSTPSRSTARSSTPTSRPTLPASRSTSRASTPTRRPSTPSSEHSISAPSVKISSSPKPA PVTARQPTPVRGRQQAPVTSRQPTPTTSRQPASVTSRQQASVTSRQQQPVPSRGTSPTVRSRPWKPSEMPGFSLEAPPNL RTTLPDRPLSATRGRPGAPTSRSSSIEPSSSGRPKRQSCSPSRGRSSNGSVHISGNSMPAVNRGYSKVNDNVSPVVIGNK MVERVINMRKLAPPMMDDKNSPRSNLSGKSSSPDSSGFGRTLSKKSLDMAIRHMDIRRTIPGNLRPLMTNIPASSMYSVR SGPQRGRSRTVSASDSPHATSSNASSELSVNQNGICLDSSEVDDDIGSERCGQSPASVRGR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 18 | 18 | - | – | |
| MobiDBLite | 1 | 29 | 29 | - | – | |
| PANTHER | 13 | 324 | 312 | 9.1E-191 | – | |
| PANTHER | 13 | 324 | 312 | 9.1E-191 | – | |
| MobiDBLite | 87 | 108 | 22 | - | – | |
| MobiDBLite | 123 | 471 | 349 | - | – | |
| MobiDBLite | 151 | 321 | 171 | - | – | |
| PANTHER | 328 | 619 | 292 | 9.1E-191 | – | |
| PANTHER | 328 | 619 | 292 | 9.1E-191 | – | |
| MobiDBLite | 328 | 382 | 55 | - | – | |
| MobiDBLite | 416 | 471 | 56 | - | – | |
| MobiDBLite | 492 | 521 | 30 | - | – | |
| MobiDBLite | 500 | 521 | 22 | - | – | |
| MobiDBLite | 555 | 598 | 44 | - | – | |
| MobiDBLite | 555 | 621 | 67 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi6g1v0072300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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