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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0076000 |
| Transcript ID | LotjaGi6g1v0076000.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Carboxyl methyltransferase; TAIR: AT3G11480.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; Swiss-Prot: sp|Q9SPV4|SAMT_CLABR Salicylate carboxymethyltransferase; TrEMBL-Plants: tr|I1MNB5|I1MNB5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0076000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:14428644..14431946) extracted from Lotus japonicus Gifu genome v1.2.
GTTAATTAGATCAAAACATAAACACAGAAATCAAGTTTAGAGAAAGAGTGAAATGGAGAAAATAGAAACAAGAAAGGATG TGGCACAAGTACTGCACATGAATGGAGGCACCGGAGAAACAAGCTATGCCAAAAACTCCTTACTTCAGGTACAAATTATA TATTCATGAATATTGTATCATACCAGGATTAATTGCACGCTTGCTCGTATATATATTACCACAAATTAGCAAGGTTAATT AAGAATCTGATATTGAGATAATACGAAAACCATACAAAGAAAAGAAGGTTTATATACCAGTGAAACCATATTTTGTTTTA TCAATTTTTATTTACACCTCCAAGCACAGACATTTCATACACACTTAATTTTTCTTTATATTTTTTCACATATCACATTT ATTACTTCTCTACGATTCATTTATTTTTTCGGTTAATATATTTTATGTCTGTATGTTGTTGTTTTCAATGAATGGTATGC AGCAAAAGGCTATTTCATTAACAAAGGCATTGAGAGAGGAAGCCATAACCAGCCTCTACCTTAAGAAAGTCCCGAGAATT TTATCCATTGCAGACTTGGGTTGCTCCTCTGGACCAAACACTTTCATGGTGATATCTGAAATTATCAAAACGGTGGAGAA TCTTTGCCGAGAAATGAAGCATAAGGAGTCTCCTGAATACCATTTCTTCATGAATGATCTTCCTGAGAATGATTTCAACA GCATCTTTAAGTCCCTTGGCAGTTTCAAAGAGAAGCTAAGTGATGAAATAGAAGCTGAGACTGGCCCATGCTTTTTCACT GGTGTTCCAGGCTCCTTTTATGGCAGGGTCTTTCCGACAAAAACTTTGCATTTTGTCCATTCCTCTTACAGCCTTCATTG GCTATCCCGGGTATATGTTAATTGATTATAAACATTTTCTGTAATATTAATCTTTTTATAAACATATTTTTTATAGCTTG AAATTTAAACACACAAAAAAAATCTCAAACGAAATAGCACATGTTACCATATGTATATGCTAGCATCCTTATTTCTTATG TAAAAGGGGAAAAGAAGGGTTTGTTTATAGTTTGTCCATTTCATGTTTTTATTACGGAAAATAAAGCTGAAAAAACATTT CGTGATGTTAATTAGTAAATGTTTTTTTTTGAAAATAATTTCTAAAATTTAATCAAAACAAAAAAAAAAACGTTTTCATT TTCACTGAAAATGAAAAATGAGCTGCTACCAGTCTACCACCATGACTGTCACCGTTGTCACTGCCGCCGCCGCAACAACC AACCAGTGAGATGAAAAGTGATAATGTTGGAGGTTGGTGGTAGCGGCATAGTGACAATGATAGTGACGACGGTGAAGGTG GTGGTGGCTGTGATAGTGGTGATGGCGGCAGCGTACGTAAGCGCTGAAGGTGGTGGTAGTGATAGTCGAAATGGTGGTGG CAGTGACGTGACGATGATTGTGGCAATTATGGCGGTAATTGTGGTAGTGGCAACAACATCGGTGAAAATAAAATAGAAAG TCGAAACAAATATATTTGATTATTTTCTAAATTTTATAAATGTTAAAATGGAAACTATTTTTATAAAAAAATGAAAAACA TAAATATTTTCTCAAACCAAACACATTCCGAGTGTAACTAAACTACCTTTCTTCTTTAATTTCTTAGGAGTGTGATAAAA CTATTACACATTTAAGATTGAAATATATAAACATTTATTGGTGATTAATTAGGTTCCTCAAGGCGTAGAGAATAACAAGG GCAATATTTACATGGCTCGTTCGAGTCCCTCAAACGTCCTCAAGGCTTACTATGAGGAATTTCAAAAAGATTTCTCATCA TTTCTCAAGTCTCGTGCAAAAGAGCTAGTTGAAGGAGGTAAAATGGTTTTAACACTTTTAGGAAGAACAAGTGAAGTGCA ATATAGCGAAGATGGTTGCGATATTTGGGATCTTTTGGCTTTGGCTCTTAGTGACATGGTGTCCGAGGTATGCACATATT TTTTTATTATTCATAGTTTTCTGCCAAATCACCAAATTAAAAAGAAAAGGTTAATATAAATACATTCTTTTTTCAAAAAT ACATATACAATGCTGAAAATTTCATTGTGTTAATTGCCAAAATGTATATGCACTTTTATAATGAAAATAAATGTTTTATA TTTTTATTTATCTTCATCAATCAATTTGTCATGTTATAATTTGTTTGAATTAAAAAATATTTCAAATATAAAATGAAGAA ACATAATTGAATACATGTGTAAAAAAAATTATACTGGCCATGCGTGCAAATTAAATTCTTATATTTATTCAATCATTAGA AATTATGTTTTCCTGTATTGGAATGGTAAGTTACAACCAAATGGATTGACGTGGTGGTAATTTTGTCTTTGAATAACATA ATTAAAACATTAATTGAAACATCTAGATGAATTTTCTTATCGGAGAGTTGACATACCCAATATGGCACAGGGAAAAATAA ATGAAGAGAAACTAGACACTTTCAACCTGCCTTTGTACCAGCCATCTCCATCTGAAGTGAGACTAGAGGTTCTGAAAGAA GGTTCATTCACCATTAATTGTTTGGAGATATCTGAAGTACATTGGAATGCTCATGATGGCTGGAATGCCTTCGATTCAAA ATCTCTCGATAGTGTTGGCGGATATAATGTTACAAAGTGCATGAGGGCCGTTAACGAACCATTACTCATCACTCACTTTG GAGAAGCTGTCATTGATGAGATTTTTCGTCGATATCATGCAATCCTAATTGATCGAACGTCCAAGAACAACGTCAAATTC ATTAATCTTAGCATATCAATGACCAGAAATGAATGAGGGACAAGTTGTTTGCATAATTGTGGTTCCTATAAGAAAGAAAA AATAAACTTCATCTCTGTTGTTGTCTGTTTACATTATGTTTGTAATAATTAATTAGCTTGGATGTTGGTAGTGGGTTGTC CACTTACTCTTCTTCCGGGCCCAAACGAACCATCCTGAGGCCCAAGTGGCTTGTGAATTTCATTTAGTTTGTATTGAGTC TGTTTTCACTTCTGTTCTAGAATTAATATTTCCTATAGGAGGATGTTGTCACTTGTATGACATTCCTTAACTATAGGAAA CAAATTCAAACAATAAATTGTATTGAGTTGAAAGTAATGGATATGTAGAAAATTGTCGTAGCCATCTTTGGTGGGATAAC ATTCTTCCTACCAACTTGATGTTTTCATGTCATTCATGTCTTTTTTTTTTTGTCAAAGGAATCTGGTTTCATTTCCAAGC GGGCCAGGCCCAGAGAAACAAGG
CDS sequence (LotjaGi6g1v0076000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGAAAATAGAAACAAGAAAGGATGTGGCACAAGTACTGCACATGAATGGAGGCACCGGAGAAACAAGCTATGCCAA AAACTCCTTACTTCAGCAAAAGGCTATTTCATTAACAAAGGCATTGAGAGAGGAAGCCATAACCAGCCTCTACCTTAAGA AAGTCCCGAGAATTTTATCCATTGCAGACTTGGGTTGCTCCTCTGGACCAAACACTTTCATGGTGATATCTGAAATTATC AAAACGGTGGAGAATCTTTGCCGAGAAATGAAGCATAAGGAGTCTCCTGAATACCATTTCTTCATGAATGATCTTCCTGA GAATGATTTCAACAGCATCTTTAAGTCCCTTGGCAGTTTCAAAGAGAAGCTAAGTGATGAAATAGAAGCTGAGACTGGCC CATGCTTTTTCACTGGTGTTCCAGGCTCCTTTTATGGCAGGGTCTTTCCGACAAAAACTTTGCATTTTGTCCATTCCTCT TACAGCCTTCATTGGCTATCCCGGGTTCCTCAAGGCGTAGAGAATAACAAGGGCAATATTTACATGGCTCGTTCGAGTCC CTCAAACGTCCTCAAGGCTTACTATGAGGAATTTCAAAAAGATTTCTCATCATTTCTCAAGTCTCGTGCAAAAGAGCTAG TTGAAGGAGGTAAAATGGTTTTAACACTTTTAGGAAGAACAAGTGAAGTGCAATATAGCGAAGATGGTTGCGATATTTGG GATCTTTTGGCTTTGGCTCTTAGTGACATGGTGTCCGAGGGAAAAATAAATGAAGAGAAACTAGACACTTTCAACCTGCC TTTGTACCAGCCATCTCCATCTGAAGTGAGACTAGAGGTTCTGAAAGAAGGTTCATTCACCATTAATTGTTTGGAGATAT CTGAAGTACATTGGAATGCTCATGATGGCTGGAATGCCTTCGATTCAAAATCTCTCGATAGTGTTGGCGGATATAATGTT ACAAAGTGCATGAGGGCCGTTAACGAACCATTACTCATCACTCACTTTGGAGAAGCTGTCATTGATGAGATTTTTCGTCG ATATCATGCAATCCTAATTGATCGAACGTCCAAGAACAACGTCAAATTCATTAATCTTAGCATATCAATGACCAGAAATG AATGA
Protein sequence (LotjaGi6g1v0076000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEKIETRKDVAQVLHMNGGTGETSYAKNSLLQQKAISLTKALREEAITSLYLKKVPRILSIADLGCSSGPNTFMVISEII KTVENLCREMKHKESPEYHFFMNDLPENDFNSIFKSLGSFKEKLSDEIEAETGPCFFTGVPGSFYGRVFPTKTLHFVHSS YSLHWLSRVPQGVENNKGNIYMARSSPSNVLKAYYEEFQKDFSSFLKSRAKELVEGGKMVLTLLGRTSEVQYSEDGCDIW DLLALALSDMVSEGKINEEKLDTFNLPLYQPSPSEVRLEVLKEGSFTINCLEISEVHWNAHDGWNAFDSKSLDSVGGYNV TKCMRAVNEPLLITHFGEAVIDEIFRRYHAILIDRTSKNNVKFINLSISMTRNE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 9 | 373 | 365 | 1.8E-170 | – | |
| PANTHER | 9 | 373 | 365 | 1.8E-170 | ||
| SUPERFAMILY | 10 | 372 | 363 | 5.4E-132 | ||
| Gene3D | 13 | 356 | 344 | 1.3E-137 | ||
| Gene3D | 28 | 297 | 270 | 1.3E-137 | – | |
| Pfam | 45 | 372 | 328 | 3.3E-121 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Methyltransferase activity | Catalysis of the transfer of a methyl group to an acceptor molecule. |
Expression pattern of LotjaGi6g1v0076000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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