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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0079900 |
| Transcript ID | LotjaGi6g1v0079900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Abscisic acid receptor; TAIR: AT2G40330.1 PYR1-like 6; Swiss-Prot: sp|Q8S8E3|PYL6_ARATH Abscisic acid receptor PYL6; TrEMBL-Plants: tr|K7LRS4|K7LRS4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0079900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:15253185..15256345) extracted from Lotus japonicus Gifu genome v1.2.
TACATAATTGAGAAAACCAGGTCCATATACCCTTGAAAGTTGAGCATCCACTTGCATGCCCTGCGTAAGCTCCTTGGCAA GAAATCAATAACAACAACAACCACCACCTTGTGACTTCCCAACCCAACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTACTTGTTCAGCTTCACCCTCA TCTTCCAAAGCCAAAAAGAAAAGGACCAACCATAACAAGAGGAGGAAAAAATAAACCCCTCAACAGCAAAACTAATACAA CTTGCATTACAAAAAGATAATAACACAAAACTTAGCCTTACCCCTTTTCCGTCTCTAACACTCATATAAACGCTTTTGTG TATTCCATATCAATCAGCAAATCAATAACACATAGTGTGTTATTGCCGGAGAGAAAGAGATATTCTTATAAATTAATTAA AATACACCATGAACACATGATTTCTATGAAGATAATGAAATAACAAGCTACAATATCATATGAAAAATATATTAATAATC ATGAAATTTAGACGCACATCAATATCTCATACATGTAGTTCTATTCGGGCAAGGTTTCGAAAGCCTTTCCGGAATGTCTA TCATTTTGATTTCCGAATAGAATAGATTTTGGATCTTCACAAATAATCCTCCGTTTTGGTTTGACTCATCTTCAAAGTTA GTCGATGTTTTTATGTGGTTACATTCTAGATCACCCTGGCTTCATTACCCGCTCATGACGAATATGTTGCTTGTGAGACT TATCTGCTTGATGGTTATGAGTCAGGATTTACAATATGTAGATATAGTTTTCCAACTTGGTGATCATCATTTAGATTCAC CAAACAAACTCACCAAGATTTAGGGTCAAATATTAGCATTATCCATTCATGACATTCCAAGAGAATGCTCCTTTTGAGGC GATTCCTCTATAGACGATTGTCGTCTACGTGTTTGAACTATTGCGTTCGGAGCTTGATAATCTTTCAGGCAGATTCCGCC AAATGTTCTTCCAAAATCCAAACCTAGAGCACCTTTTATCTTCATGTGGTAGTTATAGTTTGAATACTCTAGATGTAGTG GATATGTCCACTGCGAGCGTGATGAGTAATGGCAGGGTGTACCTGTAAAAGACTGTTTCATGTTCAAGTTAACTTTTTGT TCAGAAAGAGAGTCTCGAAATCTAAGAAGAACTAAGAGTTTTGCATAACTAAGTGTGTTAGTCTCATTCGCTTGGCCTGT GCTGACACCATCTCACTAACACATATTGTAGAGAGATAGAAAAAGTAAGAAAATTAGAGACATAATAAGTTATATAATAA AAAAAGAAGTGAGAAATAAGAAGAAAATTAAATGTGGGTCAAATTTTGATGAAGGAAAAAATTTAGTATGAATATATCAA AGCACATTAGTAATTGGCTATGATTTTTCTTGGCAAGTAAACAATAAAGTAAAGGGGAATGGAGGAGAGGCAAAGTTGCA GTTTGAAAATAGGAAAAGGAGTACATAATTGAGAAAACCAGGTCCATATACCCTTGCAAGTTGAGCATCCACTTGCATGC CCTGCGTAAGCTCCTTGGCAAGAAATCAATAACAACAACAACCACCACCTTGTGACTTCCCAACCCAACTCTCTCTCTCT CTCTCTTTCTACTCGTTCAGCTTCACCCTCATCTTCCAAAGCAAAAAAGAAAAGGACCAACCTTAACAAGAGGAGGAAAA AATAAACCCCTCAACAGCAAAACTAATACAACTTGCATTACAAAAAGATAATAACACAAAACTTAGCCTTACCCCTTTGC CGTCTCTAACACTCATATAAACGCTTTTGTGTATTCCACATCAATCAACAAATCAATAACACATAGTGTGTTATCGCCGG AGAGAAAGTGAGATATTCTTATAAATTAATAAAAATGCCTTCTTCTCTTCAGCTGGAGATGTTTAATCCAACCACCGACG CTGCCGCCTCGGCCTCCGCCGCCCTCGCCAACGGCTTCAACTACCCGAAGACTCCTCAAACGCGGCCACCCATGGCGGCG CGTGGAGTCTTGCTAACGCTCCCAGCGTCCCTGTACTCCGGCGAAGGAAACGGCTTCCTTACAGAGGACGGCGTGGTCGC CTACCACGCGCACACGGTGGGCCCCAACCAGTGCTGCTCAGTGGTTACCCAGTCAATCGACGCACCAGTCTCCACCGTGT GGGCGGTGGTCCGGCGCTTCGACAACCCGCAAGGTTACAAGACATTCGTGAAGAGCTGCCACGTGGTTGCCGGCGACGGC ACTCACGTCGGGGCAGTCCGCGAGGTCCGCGTGGTGTCCGGGCTCCCTGCTGAGTCGAGCACGGAGAGGCTGGAGATCCT CGACGACGAGCGCCACATCATGAGCTTCAGCGTCGTTGGCGGGGAGCACCGCCTCTGTAACTACCGGTCAGTGACGACGC TCCACCACAACGGCGTGGACGCGACGCTGGTGGTGGAGTCGTACGTTGTTGACGTGCCGCAAGGTAACACGAAGGAAGAG ACATGCGGGTTCGTCGACACGATCGTGCGTTGTAATCTGCAGTCGCTGGCTCAGATCGCAGAGAATTTGAGCAAAAACTC AATGTGATTTCATTTCAACATTTCTATTTTTATTTTGTATTGTATGATTTGGCTCTGTTTGTTTTTTGTTTCGAATGTGG GTTCAGACTTCAGATCTTGTTGTATATATCTGTTGTTGTATCATGGAGTTGGATGCAAGCACGTATTTGAAATTGATGGA TGTGTATGGAGATGAGTAGGTCTGACGGCAGTGAATTTTGAACAATATGTTACATGTCCACAGTCCATATATGTAAATAT TTATCTTCCCAGCATTATTTCTCTTTGGACTTCTATAGGCAGTCCAAGAGTCCAAGATCCATGAAGAGGTATTGCCAATC TCGCAAGAAACAAAGATGTCTCTGAAAGATCATATTCATGATATTTTACTTGCAAGCTAAATACAAGTCCATACTTCCTC TGTACTTCCATGATTAAAATAGATATGTCTCTTGAGAATATACATTCTTTGGTCCATGCTATCTTGATATACATGCACTT GCTTTGTTGTTCCACCGATTAAAATAGATAATTAAATCTCC
CDS sequence (LotjaGi6g1v0079900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCCTTCTTCTCTTCAGCTGGAGATGTTTAATCCAACCACCGACGCTGCCGCCTCGGCCTCCGCCGCCCTCGCCAACGG CTTCAACTACCCGAAGACTCCTCAAACGCGGCCACCCATGGCGGCGCGTGGAGTCTTGCTAACGCTCCCAGCGTCCCTGT ACTCCGGCGAAGGAAACGGCTTCCTTACAGAGGACGGCGTGGTCGCCTACCACGCGCACACGGTGGGCCCCAACCAGTGC TGCTCAGTGGTTACCCAGTCAATCGACGCACCAGTCTCCACCGTGTGGGCGGTGGTCCGGCGCTTCGACAACCCGCAAGG TTACAAGACATTCGTGAAGAGCTGCCACGTGGTTGCCGGCGACGGCACTCACGTCGGGGCAGTCCGCGAGGTCCGCGTGG TGTCCGGGCTCCCTGCTGAGTCGAGCACGGAGAGGCTGGAGATCCTCGACGACGAGCGCCACATCATGAGCTTCAGCGTC GTTGGCGGGGAGCACCGCCTCTGTAACTACCGGTCAGTGACGACGCTCCACCACAACGGCGTGGACGCGACGCTGGTGGT GGAGTCGTACGTTGTTGACGTGCCGCAAGGTAACACGAAGGAAGAGACATGCGGGTTCGTCGACACGATCGTGCGTTGTA ATCTGCAGTCGCTGGCTCAGATCGCAGAGAATTTGAGCAAAAACTCAATGTGA
Protein sequence (LotjaGi6g1v0079900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MPSSLQLEMFNPTTDAAASASAALANGFNYPKTPQTRPPMAARGVLLTLPASLYSGEGNGFLTEDGVVAYHAHTVGPNQC CSVVTQSIDAPVSTVWAVVRRFDNPQGYKTFVKSCHVVAGDGTHVGAVREVRVVSGLPAESSTERLEILDDERHIMSFSV VGGEHRLCNYRSVTTLHHNGVDATLVVESYVVDVPQGNTKEETCGFVDTIVRCNLQSLAQIAENLSKNSM
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 46 | 227 | 182 | 6.4E-105 | – | |
| PANTHER | 46 | 227 | 182 | 6.4E-105 | – | |
| Gene3D | 60 | 226 | 167 | 1.2E-77 | ||
| SUPERFAMILY | 79 | 221 | 143 | 5.98E-33 | – | |
| CDD | 80 | 223 | 144 | 2.86707E-35 | – | |
| Pfam | 81 | 223 | 143 | 3.0E-20 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi6g1v0079900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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