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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0088100 |
| Transcript ID | LotjaGi6g1v0088100.5 |
| Related isoforms 7 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Asparagine synthetase; TAIR: AT5G10240.1 asparagine synthetase 3; Swiss-Prot: sp|Q43011|ASNS2_ORYSJ Asparagine synthetase [glutamine]-hydrolyzing] 2; TrEMBL-Plants: tr|M5WGP3|M5WGP3_PRUPE Uncharacterized protein; Found in the gene: LotjaGi6g1v0088100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:17798480..17800697) extracted from Lotus japonicus Gifu genome v1.2.
ACGACTATCAGAGCTAGTACTCCAATGTTTCTGATGTCCAGAAAAATTAAATCCTTGGGAGTGAAAATGGTTCTTTCTGG AGAAGGTTCAGATGAAATATTTGGAGGTTACCTGTATTTCCATAAGGCACCTAACAAGGAGGAATTTCACGAAGAAACGT GTCAAAAAGTAATATAAAATAATTGTTATGTTCTTATAGTTTGATTTACTTTAATTTGCAGAATATTGTGTTTTAGCATG TTACATTCCCTATTTATCTCTTAGTTCCTTGTGTACGTTTAAGTTTTTGATGCTTTTGATGATTTGGCAGATTAAAGGTC TTCATCTTTATGACTGCCTTAGAGCCAACAAATCAACTTCAGCATGGGGTGTAGAGGCACGTGTACCATTCTTGGATAAA GAATTTATCAACATAGCCATGGATATGGATCCGGAGTGGAAATTGGTATTGATTTTGTGAACCTTGCAGCTAAAGCTAAA CAAATGTCATTTTTCAACTTCTTGATTTAGTTTGAATGCTTAAGTTTGCTACTTTTGGTTATCCTGTATTGTGATTCTTG TTGCATGTCCCATATGTATTCTTTAAAGTGAAGCAAATTCCTAGGCATATGTTTTTCTTAACGAATAAAGCATGTGCATA TGGACAATTATAAGTTAGTAATTGTTGATGTCGCATATTAACTAGAGATATGGTCAAATAACTGCTTATAAATGGAAGTG GAGTCCTCTACCCTGTGTAGAGTTAGGCCTAACCTGAATTCTTTTTTTTTGAAATGAACCTGAATTCTAAGACTAAGAAA TTGGTTTTATGGGCATGTGAAGTTAATTTATTGTTGGTTTCAGTTTTTAACACATCATGAACTTTATGACAAATTTCACA GATAAAGCCTGATATTGGAAGGATAGAAAAGTGGGTATTGCGCAATGCATTTGATGATGATAAGAATCCATATTTACCAA AGGTTTGTTTTAACTTCTGCTTCATGCTTATTCATTTATCTCTTGAAAGATTTCTGAAATAAATTTTTTTCTTCATTTTT TAGCACATATTATACAGGCAGAAGGAACAGTTCAGTGACGGTGTTGGCTACAGCTGGATTGATGGCTTGAAGGATCATGC TGACAAACAAGTAGGCACTAACTTGTTTTGCTGAACTTTCTTTTTTGATGCAATGCCACAATGTTTAAATTAATATTATG GATCCATTTGAGAATAATATCCTTGATTTCTGTCATTTTTTCTCTTGATAAATGTCCAGGTCACAGATTCAATGCTGAAG CATGCCAACTGTGTTTACCCTGAAAACACTCCTACTACAAAAGAGGGATATCTCTACCGGACAATTTTTGAGAAGATATA TCCAAAGGTGGACTTTATAGTTTTGTTTTTTGATAAAAATTGCATATTTATTCACTGTCATGTGTTGTGTCTGTTCATGA GAGACCATGGTGCAACTAATCAGAGAGTAGTCTTGTTATTTGATTTGATTTAGTCTAAGATGAAATTGATCCAACCATGT GGATTAGCTTAAATCATAGTGAGCAAAAGCAACTTCCCATGGCTTTTGTGGTTGTGCGCCGTCACGGTAGTTTTCCGTGC ATCCAAACATGCACTAATGTTTTCCCACTATCAACTTCGACACCCAAAAGCTTCTCTAACATTCACTAAATCACAAGTCA GTGGTTCAATTTTTTTCTAATATTTTATCTATTGGTTTTGATCAAAATTTTTCATGAGTTTTGATGTACTCACACATCTC TTTCTCTTCCATTTTATTTCTACTCACTTTGTTTTTATCAGATCATAATTCATACATCATATCTCTCATTTCTCCTTCTT TTATTCTTCTCTGTCTGTCTCTTGGGGTGTGGGTGTAATGAGTGTGAATGAATTATTATTGTTGTCATCTTAGTTGATAT TAAGAGCTTTTCCACCCTAGCCTCACATTGTAATTTGCACACAAATTGATTGACTTGTTTATAAATTTAAAATCTTGTCA AATCCTCTTTCTAATGATGTTGAATCATTTGAACAGAATGCTGCTAGGCAAACAGTTCCAGGAGGTCCAAGTGTGGCATG CAGCACTGCAAAAGCTGTGGAATGGGATGCAACTTGGTCCAAAAATCCTGACCCTTCTGGTCGTGCAGCGCTGGGTGTTC ATGCAGCTGCGTATGCAGATGCACCATAATAACCGAGATCAATAACGGGTCCATCTAA
CDS sequence (LotjaGi6g1v0088100.5) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTTCTGATGTCCAGAAAAATTAAATCCTTGGGAGTGAAAATGGTTCTTTCTGGAGAAGGTTCAGATGAAATATTTGG AGGTTACCTGTATTTCCATAAGGCACCTAACAAGGAGGAATTTCACGAAGAAACGTGTCAAAAACACATATTATACAGGC AGAAGGAACAGTTCAGTGACGGTGTTGGCTACAGCTGGATTGATGGCTTGAAGGATCATGCTGACAAACAAGTCACAGAT TCAATGCTGAAGCATGCCAACTGTGTTTACCCTGAAAACACTCCTACTACAAAAGAGGGATATCTCTACCGGACAATTTT TGAGAAGATATATCCAAAGAATGCTGCTAGGCAAACAGTTCCAGGAGGTCCAAGTGTGGCATGCAGCACTGCAAAAGCTG TGGAATGGGATGCAACTTGGTCCAAAAATCCTGACCCTTCTGGTCGTGCAGCGCTGGGTGTTCATGCAGCTGCGTATGCA GATGCACCATAA
Protein sequence (LotjaGi6g1v0088100.5) extracted from Lotus japonicus Gifu v1.2 Proteins.
MFLMSRKIKSLGVKMVLSGEGSDEIFGGYLYFHKAPNKEEFHEETCQKHILYRQKEQFSDGVGYSWIDGLKDHADKQVTD SMLKHANCVYPENTPTTKEGYLYRTIFEKIYPKNAARQTVPGGPSVACSTAKAVEWDATWSKNPDPSGRAALGVHAAAYA DAP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | 1 | 116 | 116 | 3.49E-17 | – | |
| PANTHER | 1 | 48 | 48 | 7.0E-88 | – | |
| PANTHER | 1 | 48 | 48 | 7.0E-88 | – | |
| Pfam | 1 | 40 | 40 | 5.2E-14 | ||
| Gene3D | 1 | 119 | 119 | 9.3E-28 | ||
| PANTHER | 48 | 160 | 113 | 7.0E-88 | – | |
| PANTHER | 48 | 160 | 113 | 7.0E-88 | – | |
| Pfam | 48 | 116 | 69 | 7.6E-11 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Asparagine synthase (glutamine-hydrolyzing) activity | Catalysis of the reaction: ATP + L-aspartate + L-glutamine = AMP + diphosphate + L-asparagine + L-glutamate. | ||
| Biological process | Asparagine biosynthetic process | The chemical reactions and pathways resulting in the formation of asparagine, 2-amino-3-carbamoylpropanoic acid. |
Expression pattern of LotjaGi6g1v0088100.5, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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