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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0096600 |
| Transcript ID | LotjaGi6g1v0096600.1 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | D-cysteine desulfhydrase; TAIR: AT3G26115.1 Pyridoxal-5'-phosphate-dependent enzyme family protein; Swiss-Prot: sp|A1L4V7|DCYD2_ARATH D-cysteine desulfhydrase 2, mitochondrial; TrEMBL-Plants: tr|A0A0B2SCC0|A0A0B2SCC0_GLYSO Putative 1-aminocyclopropane-1-carboxylate deaminase; Found in the gene: LotjaGi6g1v0096600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:20961751..20970309) extracted from Lotus japonicus Gifu genome v1.2.
AAAAATTGCAACAACCTCAAACCGGCCCCAAGTTTTTTGTATTCATTTTATTTAGTTTTCCAATCATATAACAGTGACTT ATAGGATAAGTGTACACTAAGTCTTGCACCACATAAGAGCAAATATTAATAATTAAAATAGGTAAAGTAACATGTTAAGG AAAAAATAAATAAGTCATATTACAAAAATATCCTAACTCCTTCCTCCACTTTCCCTTCGTCAACATCCCCTTCCTCCACC TCCTCTTCCTCATCACCAGTTCACAGTTCCTTCATCGTCATACCAAGGTTTTTGTCGTCCCCTCCGATGACGAAGACCAT ATCACACACAACAACAACATCTCCCTCAGTGTAGATATGGATGCACGTGTTTCCTTTCTTCTTCGACAAACTTTAGCTTT TCGACACTTGTCGGCAGGAGCCTTGTTCTTCGTCCTAGTAGCCTCCAAACGGGCCTTGACAACACAATTTCCTTAGCCAT AGTCTCAGCCGCTGCACTTACCCCAAGCGCTTTAGGTAAATGAAGCATATCCACCACTTGTCTGGGAACATAAGTGTAAA CTAGAGAAAAATGTGATTTTCCTGTAGTAGCTGAGTGCACGACGCTGTTATAAGCGAATTCCACCTTAGATAGAGCTAGA TCTCACTACTTAGATTTATCTATGCAGACACTCCAAATCATATTTCCCAAAATTCTATTGATTACCTCAATTTGTCCATC AGTTCTTACTATAATTTTTTTTTCTCTTTAAGTTATATTATTGTCTTTTTTTTATAATAAATTAATGGATGTCTAAAATA CAATAACAAACTTTGGCGTCTCTATTTGCTTTTTAATTTTTGTAAAAAAAAGAAAAAGTGGAGAAAAAGAACGCATGGTA ACAAGGATGAACGGAGAAATTTGCGTACCTGCAAAATGGAAACACAAGTAACAAGGATAAGGATGAGCGTCGTCTGAAGA CAGTAACGAAATGAGTCACTGACTTCAACCGCCATGAGAAACTTGATTCATTCAAACACTCTTCAGGTGCACATTTCTTC TTTTATTTATTTCAATCCATGTTATCATTTTCAAGTCTCTTTTTTAGGGTGAAAACCTATTTTCTGTGATAACTTCATAT GGTCCATCTAACTATCCCAACTAGTGAAACAAGACTTTAGTTATTGATTTTGTTGTTAAAATTTACTTCCTATGTCTTGA ACATCTGTTCCCTTTGGTAGGTAATTTCAAAACCAAAACTGAAAACTGAGGAGTTTATAGAAAAGTTGCTTAACAGAAGG TGGACATTGCCATGCCCTGAAACAAAAATTCACCAAGTAATACATGGAAATGGATTGCACGGTCGTAACTTCCTATTGAA CACGCAGCCGGCTTTTCGTGATGGCACGGTTGAGATGGATAAACAGAAGAAGAGCTTTTATATAGTGCGGGATGATTTGT TGCACCCGCTGATTAATGGAAACAAAGGAAGAAAACTGGATGGACTACTTCCTCTGATTGAAGATTATTCCGTGACCGAC GTGGTAAAGTTATCCATCAGCTCATAGTAGTAATGTTCAACAAAATTACTCTTTCTTTGACAACTATTCTTTCATAGCTT GGCTTCTGCATTGCCTGATTTCAAATCCATGTCCCCGAAATTTATTTTCAGTGAAGGGTGTTATTAATCAAATCATGCTT CCTTTCAGATATAGTATTAGTCTCAGACAATTTTAAATTTTGTTCTTGTAGTCATTTTTGTGATATGCAAATAATGAACA ATGTACTGATATTAGATGTTCATGTTAGTATGTAGTATCTACATGTCTATGTTGCAGCTTAACGTGTAAAGCAGTGGACA ACGTAGAATATATTAGGTTATGGGTGTTTCTCTGCATCTTGATCAGATTGTTTTCTCCTGCAGTCATATAGGGTATTCAC TCAAAGTCTCCTTGAATTTCTCTAAATTATTGTACTCCTTGTATTTTATTTATACCACACAATGTTCGTAATTTTGGGAT TTCCAAGATAAAAATTACATTCATCAAGGGGCATTTTCTAGGTTACTTGCGGAGGATGTCAGAGTGCCCACACAGCTGCT ATTGGTAGGTCACTTTGTTGGTTATGGTAAAATTTGCGCTGCATTTTTTGCTGTGAAGTATACTTTTGGTAGAGCTGATG TTAAATTCTTAATTGTTTTCAATCCAAATCATGATTTTCTCATTTTGCAGCTGTTCTGTGTGCTGAGAGAGGAATTGTAT CGCATCTGCTTCTACGAGGAGAGCAGCCTGAAATCTTGACTGGCTATAACTTGATGTCTACAATATACGGAAATGTCACA TATGTTCCAAGAACTATTTATGCGAACAGGGAAGACATGCTAAAGAGCTATGCTAAATCAGTGGCTGGAAACCATGGTTC TGTCCATTGGTTCAGTGATATCATTCAAGCTTCTTCAAATTTTATGCAAATGGATGTAAGTACAAGTGAGGGAAACCATC TTCAAAAGATTTTAATTGTCAATGAAGGTGCAGGTGATTCTGTTGCTCTACTAGGTAATCAGAAGATGGAGTTTGAAAAA TAACCATGCATTTCTTCAGGAACATAATCTAATAAACAGTAAAACTTCTAGGCTTTTTTGTTTGTAGAAGTACATGTGTG CTCTACTTATTTTCAGTTAAATATGTGGAGAGATCGATCTTTATTTGCCACTGATGAAATTGTACCATTTTGAGTTCATG TTCTATATTCAGTCTTTACTTCCCCTTTGTGACATTGCCTTCACCAATGGGGGACTTCACCTGTTGAAAAGGTCATAGAT CATTTCCCCCATTAGCACAGATTGGGGTCCTCAAACTGTAGCTCAAACTGGAAGTCTGCTCCAGGAACCAACTTGCTTGA TGCACATAGTCTATCAAATCTTCAGGAACATAATCAACATATCTTTTTGCCAAGTTAATATGATAGAATTGGGTTTAAGG CTTTAAGCAAGCAGGAGTCTTGCTTAGTTGGTGCTTATGTTTGTTTTATATTTTCATAGATAAAGATTGTTTGTGTTCTT ACAAATATAATTTGTGTTTGCAAGTGTGCATATCTTTCTGGATTTCTATGAACATATAATAGAGCCTTCATAAAGTAACA TCAAGTGAGGCTTGGATCCTAGTATCATTACGTATCAAGCATCTCATTTAAATGCCATTTTCCTTTAGGATTATTGAATG TGTTGAAAGGACAGAAAATTCATATGCATCTGTGCCAGTAATGATGCAAAACATGTCTTCTGCCTTACGTGTGTGTATAT ACGGTGTAGTTGTGTACTAGTGTCCTGTCTATGTGTCAATGTACCTTTTGTGAACTCACATCCTAACATCTTTTTCATTT TCAAACTACTACATACGTATATATTCATTTCATTTTGTTTCTTTAAGTTGTTGCTTAGATTTAGTTATCTTTAATGGTTG GTTGTTGCTATAACTTCATCAACATATTGTTTCTTTGTATAGGTATTATTCGGTTAGTGCAATACTTATCACAGGATCAT TTACTTGGAAAACAAAGGGCCATGAAATTTGTTCTGGATGCTGGTACTGGCACAACAGCTGTTGGTATAGGACTTGCAGC CCATTGCTTAGGGTGCGGTTCAGTTTCTAACATGGCAATTAAGTTACAAATATTTTTGAATAATTTCATTACAACAATTC ATGTTGAGTTTTGTCCCATATTTAAAAAGGACAGCATTAAATTTTGATAATCTTAGTTGGTGCTTCTATGCAGACTCCCG TGGGAAGTATATGCAGTCATGCTGGCTGATAAAATTGATGGGTACAGAAAACAGGAGGAACGTTTGACCTCTGAATTCAA GAAGCATTTTAATTTTGAGTTCAGTGAACACAATCTAAACAGAGAAGATGCAGGCATTGTGCACTGGGTAGAGCGTGGCC ATGCAAGAAAGTAAGATGTTATATGCTTCCTTTACCTTTTTCTTTTCTTTGTGAAAAAATGTTATAATAAGCTCTAAAAA TTTGAATGATTCGTGATCCTTTTATTTGGGTAGAGCGTGGCCCTTTCTTTTCTTTCTAGCCATGATTGGCATACTGCCTT AATGAAGATTAAAAATTCTAATTATTTCTAATAAAACAAAAATAAGAAAAATTAAACATTCTGCAATAATTTAAGCTGAA ACTGTCACTGTGGATAAATCTATAAACTCGGTTTGGCGTATATTGATTGTTAGTGTGGATGTCTTGTTTTGCTTTTTGTT TTTTTAGTTTTTCACACTGTTTTAAACTTGTTTGTCCATTGTTGTTGCAATCTGTAATGAAGGAATGTTGACTCTTCATT TGATTAATTTGCTCTAAGGATGCTGAAAGACATTCATTTTTGTATTCATATACCTGAAGCACTTACTTTTAAGACATTGT TTAGTAATGTAGGAAATACAATAAGATACACATGGAAATGCAAAGAGGCATGCAATAATTATCAATTGCAACACAGACTT GACAAAAATTGGTCATCATAATACTTTCTTTTTTTATAGTAACACAATCACATAACCATTAAGGTGCCATACTGCATAAT AAATATTTAAACAATGACTAGTTCACCTAATTTTCAAGATGGATGGCAGTATTCAGGTAGCAAGTCATCATGACCTAGGA AGCGGGATATGGACACAATGCGTCTAATTCTAAGCTTAAAAATTGTAGTTCTTAATTTTGCACACAATCTCAAAGAAGAT CCATATTTTGAAAAGAAAAATAAATTAAGAAAAAGAAAAGTTCCAAATAGTCTAAGCACTGGAGCACCTTGTGTGAAAAG ACAAACTACTGCTAGTATTAGCTGCTACAATAGCAGTTAATAAAATGTGAATCTATGCTGCATTGGTAGTAATAATGACT AGTTAACTTAGTTCTAATGTAGCCACTTGATAGGCACATATCTTTTATATTAGAGAGCAACATTAGTTTTTAAACGAACT ATATGATCTACCCTGTATAGTTGGTTTCTGACTCTCGTTTTGTTTCTCAATCATATATTTTGCAAATTTTAGATTTGGTA ATATTTTGGAGGGGGAAATGGAAGCATGTCAGCAAATTGCCCAAGAGACTGGGATTCTTGTGGATCCTGTGTACACTTTA GCTGCTTGGGAAACAGCTATGCTTCTTTCTGGCAAAGAAGCTGAAGGAGGACCAGAAGTGGTGATGCTTCACACTGGTGG CACATTGGGTATGTTTGGGTTAGCACAGAGGTACAAAAATTATTTTGGCAAGCTCAAAAAAGGGGTCAATCTTTATTAGA AAAGCTATCTTTTAACTTAGGTGACAAGTTGAGATGCTTTATTCCTACCATTCATAATTTTCAGCTGTTCTCCTGTTCAT ATAGAAATGCAGCATGAAAATTCCCATTCCTATTGAGTTACTGTAATCTACTAATACGACACTAATGATCAATTTCATTG TAGTTGACAACTGATAGCATGAAAAGTTGTTCTTAAGTAATTTTTCATTTATTGTTGGGAGGAGATTGTTTACTGTTAAA GTGGTAACTTCTCCACTGGGAAATTGTAATGAATACTTCGTGGTATTTTTTTGGTCTATTGGTTTTGTTGCTTGTACGGA GTAAAGCTTTCAAAAAGCAGCCACTGACCCATGGACTCAGCCCTGTTTTCGGGCCTGATTTTTTTTGGCCCATTAATAGG TGAGGGTCATTTGGCCCTTATCCATACGACCCCTCACATTAAGTGGGTTAGACTTTACTGAATCACTATCATTGAAGAGG AAAAGGGATACTGACCTAGGGGGAGACAGGGCTTATCCAGAAGAAGATAGATTCCCCAAGAGACTACTGCTGCAATACCA TGTAGAAGAGTCAAGTTCTACAACTGAAAAGGCTGAGGAGGCGGGCCAATCCATGCCCCCAACGCCTAAATGAGTCTATT CAGCTGGAATTGTCGCGGTTTGGCGGCTGCTGCGACAATTGATGAGTTAAAGAACCTCTCTAAAAGGTTTAAGCTGTCCA TAGTGTTCTTGATGGAGACAAGAGCACAAAATATCAGAGTTGAAAATACAAAATGACTACTGCACTGTGATCATTGCTAC TATGTTGAGGCAAGAGGCAGAAGTGGGGGGCTAGCCCTCATGTGGAACAAAAGCACCAAAATAAACATTCTAGGAAGCTC TCAAAGTTACATCCACACTCGAGTGACGGAAGGACACAACTCTTGGCATGTAACATGGGTCTAAGGGCACCCAACCTTCA CCCAAGGACGTAAGCTGTGGGGTGAACTTGCTGGCCTTCACACCACTGATGATCCTTGGTGTCTAATGGGAGACTTTAAT GAGATCTTGGAACAACATGAAAAAGAAGGATTGAGACCGCACCATAGAAACCGTATGGAGCTCTTTAGATAAATCATCGA CTCTAAAAACCTGATGGACCTAGATCTGAAAGGGTGTAGGTTCGTTTGGGTTAGCAACCCAAGACAAGGCCAGGTCACTA AGGAAAAGATCGACAGAGTGCTCTTTAACTGGAACATGCAGGAACTGTTTCAATATGTAGTGGGAATTGCCCTTCCCATT GTAAGCTCGAATCACTCTCCACTAGTTTTACGTCTAAAATATGCAAGCAAGCACACAAAGATGTTTAGATATGAGCCATA ATGGGAGGAACATCCAGAATGTAAAGAAACCATAAAGAAAGCTTGGGATAATACTAGTGAAACTGCTAGTAGTCATTGTA GCAACTTATCTGGGAAAACAACAAACACAAAACTGGCGCTCACTGAATGGCATCACCAGAACTTCTCTAGAGCTGATAAG GAAATAGCTGAGCTCAAGAATCAGTTGGAACACCTACAAAATTACAGCAATTCTGGGGAGGACTGGCAGGAAATTAAGCA AAGGAAAATGAGACTAAAAGATCTTTGGAGGCAAGAGGAACTATTCTGGAGCCAAAGATCAAGAATCAAATGGTTGAAAA GCGGGGACAAGAACACAAAGTTCTTTCATGCTTCCACTGTCCAACGTAGAGAAAGAAATCGAATTGAGAGGATCAAGGAT ATGCAAGGTACCTGGGTTAGAAGCCAATTAGCTATAAATCGAGATGTGCCAGACTTCTATCCAGATATTTACAAAAGCAC GAACCGCCAGAATATCACTGAATGCCTCAACGCAGTTCCAAGAGTCATCTATGAAAGTCTGAACAGGGAACTCTTAGAGC CTGTAACGGAAAATGAAGTCAAGGAGGCTGCCTTCTGCCTGGGAAGCATGAAAGCTCCTGGACCGGACATATTGAACAGT CTATTCTACCAAAAACAATGGGACACAGTAGGAGAAGAAGTGAGTAAGGCAGTAATTTCTTTCTTTGACACATGGAATCT ACCAGAAGATATAAATGAGGCACTAGTTACCTTGGCTCCAAAAACCCAAAATCCAGAATCTATCTCCAACTTTCGACCCA TCAGCTGCTGTAACTTTGTTTGTAAAATCATCTCCAGGATCTTGGTAACAAGACTGAAACCAGCAATGAATTCTATCATC ACCCCCCAGAAGAATGCTTTTAATAGGGGGAGACAAATTCAGGACAATCTTATTATAGTGCAAGAGGCATTTAACGCACT GAAGAAGAGATGCAGAATAGGCAGAGATCATTTGAGTGTCAAGCTTGACATGAATAAAGCCTTCGATCAAGTAGAGTGGA AGTTCCTGGAAAAAGGATTGTTAGCATATGGTTTTCATTCGAACTAGGTTAAAATAGTCATGGCGCTGGTCATGGGGGTT ACTTACCGTTACAAGATCAATGGAGTTTGCGGAGAGAAGATCAAGCCACAAAGAGGACTTCTCCAAGGCGACCCTCTTTC ACGGTATATATTCCTGCTAGTATTGGACGTTTTTTCCCACATGATAATCAGGAGCAAGGAATAAGGAGGAATACAAGGCA TCAAACTGACACAACAGGCTCCCGCACTAATGCATTTGTTTTTTTTGCCAATGATGCTATGCTTCTTGCTCAAGCCACTG AACCGGAACTGTATAAATGGCAACAACTCCTGCTGCTTTTTTTCATCGCGTCTGAACAAAGGATCAACTGCTTAAAGTCA GGGCTGATTGGTGGCAAGGATGTTCCCAGTGATAAGAGAAGAAGACTAGCAACTATTTTACAAGTGCAGGTATGGGATAA CCCCGAAATGTACTTGGGCATGCCGACTGAATGGGGACGATCCAAAATCAGCTCGCTAGGATGGATAAAAGACAAGGTGC TGAACAAACTTCAGGGATGGAAAGGACACTTCTTAAATCAATCTGGTAAAGAGACCCTCATTAAGGCTGTAGTCTAGGCC ATACCTTCATATGCTATGGCAATACTCAGATTTCCCAAAGCCTTTTGCAAGGACCTTTGTTCTAAAGTAGCCCGTTTCTG TTGGACCTCCAAAGGAGACAAAGGTATTCATTGGCGGAAATGGGAACTCCTAACGAAGCTCAAGAATGAGGGGGGGATAG GCTTCAAAGACTTTGAAGCAAACAATCAGGCATGTTGGCTAAGCAAGTCTGGAGAATTATGCACAACCCTGAGTCTCTC
CDS sequence (LotjaGi6g1v0096600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCTACAATATACGGAAATGTCACATATGTTCCAAGAACTATTTATGCGAACAGGGAAGACATGCTAAAGAGCTATGC TAAATCAGTGGCTGGAAACCATGGTTCTGTCCATTGGTTCAGTGATATCATTCAAGCTTCTTCAAATTTTATGCAAATGG ATGTAAGTACAAGTGAGGGAAACCATCTTCAAAAGATTTTAATTGTCAATGAAGGTGCAGGTGATTCTGTTGCTCTACTA GGTATTATTCGGTTAGTGCAATACTTATCACAGGATCATTTACTTGGAAAACAAAGGGCCATGAAATTTGTTCTGGATGC TGGTACTGGCACAACAGCTGTTGGTATAGGACTTGCAGCCCATTGCTTAGGACTCCCGTGGGAAGTATATGCAGTCATGC TGGCTGATAAAATTGATGGGTACAGAAAACAGGAGGAACGTTTGACCTCTGAATTCAAGAAGCATTTTAATTTTGAGTTC AGTGAACACAATCTAAACAGAGAAGATGCAGGCATTGTGCACTGGGTAGAGCGTGGCCATGCAAGAAAATTTGGTAATAT TTTGGAGGGGGAAATGGAAGCATGTCAGCAAATTGCCCAAGAGACTGGGATTCTTGTGGATCCTGTGTACACTTTAGCTG CTTGGGAAACAGCTATGCTTCTTTCTGGCAAAGAAGCTGAAGGAGGACCAGAAGTGGTGATGCTTCACACTGGTGGCACA TTGGGTATGTTTGGGTTAGCACAGAGGTACAAAAATTATTTTGGCAAGCTCAAAAAAGGGGTCAATCTTTATTAG
Protein sequence (LotjaGi6g1v0096600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSTIYGNVTYVPRTIYANREDMLKSYAKSVAGNHGSVHWFSDIIQASSNFMQMDVSTSEGNHLQKILIVNEGAGDSVALL GIIRLVQYLSQDHLLGKQRAMKFVLDAGTGTTAVGIGLAAHCLGLPWEVYAVMLADKIDGYRKQEERLTSEFKKHFNFEF SEHNLNREDAGIVHWVERGHARKFGNILEGEMEACQQIAQETGILVDPVYTLAAWETAMLLSGKEAEGGPEVVMLHTGGT LGMFGLAQRYKNYFGKLKKGVNLY
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 258 | 258 | 5.3E-117 | – | |
| PANTHER | 1 | 258 | 258 | 5.3E-117 | – | |
| Gene3D | 43 | 253 | 211 | 7.3E-39 | ||
| SUPERFAMILY | 61 | 251 | 191 | 1.24E-21 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi6g1v0096600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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