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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0096600 |
| Transcript ID | LotjaGi6g1v0096600.4 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | D-cysteine desulfhydrase; TAIR: AT3G26115.1 Pyridoxal-5'-phosphate-dependent enzyme family protein; Swiss-Prot: sp|A1L4V7|DCYD2_ARATH D-cysteine desulfhydrase 2, mitochondrial; TrEMBL-Plants: tr|A0A0B2SCC0|A0A0B2SCC0_GLYSO Putative 1-aminocyclopropane-1-carboxylate deaminase; Found in the gene: LotjaGi6g1v0096600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:20962624..20969381) extracted from Lotus japonicus Gifu genome v1.2.
TAACAAGGATAAGGATGAGCGTCGTCTGAAGACAGTAACGAAATGAGTCACTGACTTCAACCGCCATGAGAAACTTGATT CATTCAAACACTCTTCAGGTGCACATTTCTTCTTTTATTTATTTCAATCCATGTTATCATTTTCAAGTCTCTTTTTTAGG GTGAAAACCTATTTTCTGTGATAACTTCATATGGTCCATCTAACTATCCCAACTAGTGAAACAAGACTTTAGTTATTGAT TTTGTTGTTAAAATTTACTTCCTATGTCTTGAACATCTGTTCCCTTTGGTAGGTAATTTCAAAACCAAAACTGAAAACTG AGGAGTTTATAGAAAAGTTGCTTAACAGAAGGTGGACATTGCCATGCCCTGAAACAAAAATTCACCAAGTAATACATGGA AATGGATTGCACGGTCGTAACTTCCTATTGAACACGCAGCCGGCTTTTCGTGATGGCACGGTTGAGATGGATAAACAGAA GAAGAGCTTTTATATAGTGCGGGATGATTTGTTGCACCCGCTGATTAATGGAAACAAAGGAAGAAAACTGGATGGACTAC TTCCTCTGATTGAAGATTATTCCGTGACCGACGTGGTAAAGTTATCCATCAGCTCATAGTAGTAATGTTCAACAAAATTA CTCTTTCTTTGACAACTATTCTTTCATAGCTTGGCTTCTGCATTGCCTGATTTCAAATCCATGTCCCCGAAATTTATTTT CAGTGAAGGGTGTTATTAATCAAATCATGCTTCCTTTCAGATATAGTATTAGTCTCAGACAATTTTAAATTTTGTTCTTG TAGTCATTTTTGTGATATGCAAATAATGAACAATGTACTGATATTAGATGTTCATGTTAGTATGTAGTATCTACATGTCT ATGTTGCAGCTTAACGTGTAAAGCAGTGGACAACGTAGAATATATTAGGTTATGGGTGTTTCTCTGCATCTTGATCAGAT TGTTTTCTCCTGCAGTCATATAGGGTATTCACTCAAAGTCTCCTTGAATTTCTCTAAATTATTGTACTCCTTGTATTTTA TTTATACCACACAATGTTCGTAATTTTGGGATTTCCAAGATAAAAATTACATTCATCAAGGGGCATTTTCTAGGTTACTT GCGGAGGATGTCAGAGTGCCCACACAGCTGCTATTGGTAGGTCACTTTGTTGGTTATGGTAAAATTTGCGCTGCATTTTT TGCTGTGAAGTATACTTTTGGTAGAGCTGATGTTAAATTCTTAATTGTTTTCAATCCAAATCATGATTTTCTCATTTTGC AGCTGTTCTGTGTGCTGAGAGAGGAATTGTATCGCATCTGCTTCTACGAGGAGAGCAGCCTGAAATCTTGACTGGCTATA ACTTGATGTCTACAATATACGGAAATGTCACATATGTTCCAAGAACTATTTATGCGAACAGGGAAGACATGCTAAAGAGC TATGCTAAATCAGTGGCTGGAAACCATGGTTCTGTCCATTGGTTCAGTGATATCATTCAAGCTTCTTCAAATTTTATGCA AATGGATGTAAGTACAAGTGAGGGAAACCATCTTCAAAAGATTTTAATTGTCAATGAAGGTGCAGGTGATTCTGTTGCTC TACTAGGTAATCAGAAGATGGAGTTTGAAAAATAACCATGCATTTCTTCAGGAACATAATCTAATAAACAGTAAAACTTC TAGGCTTTTTTGTTTGTAGAAGTACATGTGTGCTCTACTTATTTTCAGTTAAATATGTGGAGAGATCGATCTTTATTTGC CACTGATGAAATTGTACCATTTTGAGTTCATGTTCTATATTCAGTCTTTACTTCCCCTTTGTGACATTGCCTTCACCAAT GGGGGACTTCACCTGTTGAAAAGGTCATAGATCATTTCCCCCATTAGCACAGATTGGGGTCCTCAAACTGTAGCTCAAAC TGGAAGTCTGCTCCAGGAACCAACTTGCTTGATGCACATAGTCTATCAAATCTTCAGGAACATAATCAACATATCTTTTT GCCAAGTTAATATGATAGAATTGGGTTTAAGGCTTTAAGCAAGCAGGAGTCTTGCTTAGTTGGTGCTTATGTTTGTTTTA TATTTTCATAGATAAAGATTGTTTGTGTTCTTACAAATATAATTTGTGTTTGCAAGTGTGCATATCTTTCTGGATTTCTA TGAACATATAATAGAGCCTTCATAAAGTAACATCAAGTGAGGCTTGGATCCTAGTATCATTACGTATCAAGCATCTCATT TAAATGCCATTTTCCTTTAGGATTATTGAATGTGTTGAAAGGACAGAAAATTCATATGCATCTGTGCCAGTAATGATGCA AAACATGTCTTCTGCCTTACGTGTGTGTATATACGGTGTAGTTGTGTACTAGTGTCCTGTCTATGTGTCAATGTACCTTT TGTGAACTCACATCCTAACATCTTTTTCATTTTCAAACTACTACATACGTATATATTCATTTCATTTTGTTTCTTTAAGT TGTTGCTTAGATTTAGTTATCTTTAATGGTTGGTTGTTGCTATAACTTCATCAACATATTGTTTCTTTGTATAGGTATTA TTCGGTTAGTGCAATACTTATCACAGGATCATTTACTTGGAAAACAAAGGGCCATGAAATTTGTTCTGGATGCTGGTACT GGCACAACAGCTGTTGGTATAGGACTTGCAGCCCATTGCTTAGGGTGCGGTTCAGTTTCTAACATGGCAATTAAGTTACA AATATTTTTGAATAATTTCATTACAACAATTCATGTTGAGTTTTGTCCCATATTTAAAAAGGACAGCATTAAATTTTGAT AATCTTAGTTGGTGCTTCTATGCAGACTCCCGTGGGAAGTATATGCAGTCATGCTGGCTGATAAAATTGATGGGTACAGA AAACAGGAGGAACGTTTGACCTCTGAATTCAAGAAGCATTTTAATTTTGAGTTCAGTGAACACAATCTAAACAGAGAAGA TGCAGGCATTGTGCACTGGGTAGAGCGTGGCCATGCAAGAAAGTAAGATGTTATATGCTTCCTTTACCTTTTTCTTTTCT TTGTGAAAAAATGTTATAATAAGCTCTAAAAATTTGAATGATTCGTGATCCTTTTATTTGGGTAGAGCGTGGCCCTTTCT TTTCTTTCTAGCCATGATTGGCATACTGCCTTAATGAAGATTAAAAATTCTAATTATTTCTAATAAAACAAAAATAAGAA AAATTAAACATTCTGCAATAATTTAAGCTGAAACTGTCACTGTGGATAAATCTATAAACTCGGTTTGGCGTATATTGATT GTTAGTGTGGATGTCTTGTTTTGCTTTTTGTTTTTTTAGTTTTTCACACTGTTTTAAACTTGTTTGTCCATTGTTGTTGC AATCTGTAATGAAGGAATGTTGACTCTTCATTTGATTAATTTGCTCTAAGGATGCTGAAAGACATTCATTTTTGTATTCA TATACCTGAAGCACTTACTTTTAAGACATTGTTTAGTAATGTAGGAAATACAATAAGATACACATGGAAATGCAAAGAGG CATGCAATAATTATCAATTGCAACACAGACTTGACAAAAATTGGTCATCATAATACTTTCTTTTTTTATAGTAACACAAT CACATAACCATTAAGGTGCCATACTGCATAATAAATATTTAAACAATGACTAGTTCACCTAATTTTCAAGATGGATGGCA GTATTCAGGTAGCAAGTCATCATGACCTAGGAAGCGGGATATGGACACAATGCGTCTAATTCTAAGCTTAAAAATTGTAG TTCTTAATTTTGCACACAATCTCAAAGAAGATCCATATTTTGAAAAGAAAAATAAATTAAGAAAAAGAAAAGTTCCAAAT AGTCTAAGCACTGGAGCACCTTGTGTGAAAAGACAAACTACTGCTAGTATTAGCTGCTACAATAGCAGTTAATAAAATGT GAATCTATGCTGCATTGGTAGTAATAATGACTAGTTAACTTAGTTCTAATGTAGCCACTTGATAGGCACATATCTTTTAT ATTAGAGAGCAACATTAGTTTTTAAACGAACTATATGATCTACCCTGTATAGTTGGTTTCTGACTCTCGTTTTGTTTCTC AATCATATATTTTGCAAATTTTAGATTTGGTAATATTTTGGAGGGGGAAATGGAAGCATGTCAGCAAATTGCCCAAGAGA CTGGGATTCTTGTGGATCCTGTGTACACTTTAGCTGCTTGGGAAACAGCTATGCTTCTTTCTGGCAAAGAAGCTGAAGGA GGACCAGAAGTGGTGATGCTTCACACTGGTGGCACATTGGGTATGTTTGGGTTAGCACAGAGGTACAAAAATTATTTTGG CAAGCTCAAAAAAGGGGTCAATCTTTATTAGAAAAGCTATCTTTTAACTTAGGTGACAAGTTGAGATGCTTTATTCCTAC CATTCATAATTTTCAGCTGTTCTCCTGTTCATATAGAAATGCAGCATGAAAATTCCCATTCCTATTGAGTTACTGTAATC TACTAATACGACACTAATGATCAATTTCATTGTAGTTGACAACTGATAGCATGAAAAGTTGTTCTTAAGTAATTTTTCAT TTATTGTTGGGAGGAGATTGTTTACTGTTAAAGTGGTAACTTCTCCACTGGGAAATTGTAATGAATACTTCGTGGTATTT TTTTGGTCTATTGGTTTTGTTGCTTGTACGGAGTAAAGCTTTCAAAAAGCAGCCACTGACCCATGGACTCAGCCCTGTTT TCGGGCCTGATTTTTTTTGGCCCATTAATAGGTGAGGGTCATTTGGCCCTTATCCATACGACCCCTCACATTAAGTGGGT TAGACTTTACTGAATCACTATCATTGAAGAGGAAAAGGGATACTGACCTAGGGGGAGACAGGGCTTATCCAGAAGAAGAT AGATTCCCCAAGAGACTACTGCTGCAATACCATGTAGAAGAGTCAAGTTCTACAACTGAAAAGGCTGAGGAGGCGGGCCA ATCCATGCCCCCAACGCCTAAATGAGTCTATTCAGCTGGAATTGTCGCGGTTTGGCGGCTGCTGCGACAATTGATGAGTT AAAGAACCTCTCTAAAAGGTTTAAGCTGTCCATAGTGTTCTTGATGGAGACAAGAGCACAAAATATCAGAGTTGAAAATA CAAAATGACTACTGCACTGTGATCATTGCTACTATGTTGAGGCAAGAGGCAGAAGTGGGGGGCTAGCCCTCATGTGGAAC AAAAGCACCAAAATAAACATTCTAGGAAGCTCTCAAAGTTACATCCACACTCGAGTGACGGAAGGACACAACTCTTGGCA TGTAACATGGGTCTAAGGGCACCCAACCTTCACCCAAGGACGTAAGCTGTGGGGTGAACTTGCTGGCCTTCACACCACTG ATGATCCTTGGTGTCTAATGGGAGACTTTAATGAGATCTTGGAACAACATGAAAAAGAAGGATTGAGACCGCACCATAGA AACCGTATGGAGCTCTTTAGATAAATCATCGACTCTAAAAACCTGATGGACCTAGATCTGAAAGGGTGTAGGTTCGTTTG GGTTAGCAACCCAAGACAAGGCCAGGTCACTAAGGAAAAGATCGACAGAGTGCTCTTTAACTGGAACATGCAGGAACTGT TTCAATATGTAGTGGGAATTGCCCTTCCCATTGTAAGCTCGAATCACTCTCCACTAGTTTTACGTCTAAAATATGCAAGC AAGCACACAAAGATGTTTAGATATGAGCCATAATGGGAGGAACATCCAGAATGTAAAGAAACCATAAAGAAAGCTTGGGA TAATACTAGTGAAACTGCTAGTAGTCATTGTAGCAACTTATCTGGGAAAACAACAAACACAAAACTGGCGCTCACTGAAT GGCATCACCAGAACTTCTCTAGAGCTGATAAGGAAATAGCTGAGCTCAAGAATCAGTTGGAACACCTACAAAATTACAGC AATTCTGGGGAGGACTGGCAGGAAATTAAGCAAAGGAAAATGAGACTAAAAGATCTTTGGAGGCAAGAGGAACTATTCTG GAGCCAAAGATCAAGAATCAAATGGTTGAAAAGCGGGGACAAGAACACAAAGTTCTTTCATGCTTCCACTGTCCAACGTA GAGAAAGAAATCGAATTGAGAGGATCAAGGATATGCAAGGTACCTGGGTTAGAAGCCAATTAGCTATAAATCGAGATGTG CCAGACTTCTATCCAGATATTTACAAAAGCACGAACCGCCAGAATATCACTGAATGCCTCAACGCAGTTCCAAGAGTCAT CTATGAAAGTCTGAACAGGGAACTCTTAGAGCCTGTAACGGAAAATGAAGTCAAGGAGGCTGCCTTCTGCCTGGGAAGCA TGAAAGCTCCTGGACCGGACATATTGAACAGTCTATTCTACCAAAAACAATGGGACACAGTAGGAGAAGAAGTGAGTAAG GCAGTAATTTCTTTCTTTGACACATGGAATCTACCAGAAGATATAAATGAGGCACTAGTTACCTTGGCTCCAAAAACCCA AAATCCAGAATCTATCTCCAACTTTCGACCCATCAGCTGCTGTAACTTTGTTTGTAAAATCATCTCCAGGATCTTGGTAA CAAGACTGAAACCAGCAATGAATTCTATCATCACCCCCCAGAAGAATGCTTTTAATAGGGGGAGACAAATTCAGGACAAT CTTATTATAGTGCAAGAGGCATTTAACGCACTGAAGAAGAGATGCAGAATAGGCAGAGATCATTTGAGTGTCAAGCTTGA CATGAATAAAGCCTTCGATCAAGTAGAGTGGAAGTTCC
CDS sequence (LotjaGi6g1v0096600.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCTACAATATACGGAAATGTCACATATGTTCCAAGAACTATTTATGCGAACAGGGAAGACATGCTAAAGAGCTATGC TAAATCAGTGGCTGGAAACCATGGTTCTGTCCATTGGTTCAGTGATATCATTCAAGCTTCTTCAAATTTTATGCAAATGG ATGTAAGTACAAGTGAGGGAAACCATCTTCAAAAGATTTTAATTGTCAATGAAGGTGCAGGTGATTCTGTTGCTCTACTA GGTATTATTCGGTTAGTGCAATACTTATCACAGGATCATTTACTTGGAAAACAAAGGGCCATGAAATTTGTTCTGGATGC TGGTACTGGCACAACAGCTGTTGGTATAGGACTTGCAGCCCATTGCTTAGGACTCCCGTGGGAAGTATATGCAGTCATGC TGGCTGATAAAATTGATGGGTACAGAAAACAGGAGGAACGTTTGACCTCTGAATTCAAGAAGCATTTTAATTTTGAGTTC AGTGAACACAATCTAAACAGAGAAGATGCAGGCATTGTGCACTGGGTAGAGCGTGGCCATGCAAGAAAATTTGGTAATAT TTTGGAGGGGGAAATGGAAGCATGTCAGCAAATTGCCCAAGAGACTGGGATTCTTGTGGATCCTGTGTACACTTTAGCTG CTTGGGAAACAGCTATGCTTCTTTCTGGCAAAGAAGCTGAAGGAGGACCAGAAGTGGTGATGCTTCACACTGGTGGCACA TTGGGTATGTTTGGGTTAGCACAGAGGTACAAAAATTATTTTGGCAAGCTCAAAAAAGGGGTCAATCTTTATTAG
Protein sequence (LotjaGi6g1v0096600.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSTIYGNVTYVPRTIYANREDMLKSYAKSVAGNHGSVHWFSDIIQASSNFMQMDVSTSEGNHLQKILIVNEGAGDSVALL GIIRLVQYLSQDHLLGKQRAMKFVLDAGTGTTAVGIGLAAHCLGLPWEVYAVMLADKIDGYRKQEERLTSEFKKHFNFEF SEHNLNREDAGIVHWVERGHARKFGNILEGEMEACQQIAQETGILVDPVYTLAAWETAMLLSGKEAEGGPEVVMLHTGGT LGMFGLAQRYKNYFGKLKKGVNLY
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 258 | 258 | 5.3E-117 | – | |
| PANTHER | 1 | 258 | 258 | 5.3E-117 | – | |
| Gene3D | 43 | 253 | 211 | 7.3E-39 | ||
| SUPERFAMILY | 61 | 251 | 191 | 1.24E-21 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi6g1v0096600.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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