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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0097900 |
| Transcript ID | LotjaGi6g1v0097900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | phosphoribosylformylglycinamidine synthase; TAIR: AT1G27385.1 phosphoribosylformylglycinamidine synthase; Swiss-Prot: sp|A6T343|Y3250_JANMA UPF0250 protein mma_3250; TrEMBL-Plants: tr|V7D3E8|V7D3E8_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0097900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:21227004..21232223) extracted from Lotus japonicus Gifu genome v1.2.
GGAAAAAAATCAGTGTTTGATTTTAATTTATTGATTGAAGGCAGAGAGAGGAAGAAGAGAAGAGAAGAGAAAAACAGGAA AGTAATGGCGTGCAGGGGCATGCTTGTGGTGGAACCGTTCCCAATATTTCAACGATTTTGTTTGAATTTGAATCCGAATA ATCACAGAAGAACCTTCAAATTCAATCCTCGTCCGTTTCAGTTTCACGGTGCCAATGGAGGAGGAGCACTCCGTTGCTCT CATGATGAAACGCCGTCGTTTCAGGACGATCAAGGTGGTCCCCCTCAAGAAGCTGTATTGAAAGCCATTTCTGGTAAATC AATCTCTCTCTTTTTTCTTGAACTAAGTAACTAAAAATTTGGTTTGATTGATTGATTAATTAATGGTCATGGTTACATAC AGAGGTGTCTAAGACGGAAGGGAGGGTTGGTCAAACTACCAACATGGTTATTGGTGGCACCGTGACCGATGATTCTACTA ACGAATGGCTCGCGTTGGACCAAAAGGTTTGTTTTCCTCTTTTAAGCTTAGCAACTTTGTTTTGTAATCGGAATGAATAA TTTACTTGTGTTTGTGGCAGGTGAACTCATACCCGACTAATCGGGGCTTCACTGCGATAGGAACTGGAGGTGAGGATTTT GTGCAAGCCATGGTTGTTGCCGTCGAATCTGTAATCCAACAGCCTATTCCTCAGGTGTGTACTGTATAATTGAATTGCTG TTTCATGCATTGAATTATTTTATGATCCAAGTCACATGTTTATTTCGTTCCTTACGAGCTTAGCATTGCTATATTTGTAA TACATCTTTAAATTTTTCTTTTCTTTTTTGCTTATCTATGATTATTTATTACTTTATGATTGATTTTGTGCCTAGTTTTG CTTCAGTCTAACATTACGTGAACATGGCTGTTTCTTGAAATTGATGTGATGCTTATTGCTGGATAACATTTTTGTTTTGT TTTGTTTGCTGGACTTGTTAATTAGACTTCCAATGCAACGTGTAAGATCATGCCTCTTCGACTGTCAAATAAAAGTAGAA CACATCCAAAAAGAAAAACCAACAAACTATAACCTGTGTTAACACTATATATATAATACATCTATTATATTTTATGTAAC TAATCATTCAAAAAATCTTACAACTTACTTTAAATAAGAAGGAAAACCTTCTTTCCAAGGGTGAAACCCTTGCAAGAAAA AATCCCTTAGAAACTCTATTGCTCAAATCATACTCAAACAATACAACAATGCTGACCTCTATTACCATGGATTTCCCCTC TTCAATATTACTAACCCACGATGACCTGGGACTAAGCCTTTATTTTACTGTCCTGTGAGTAACAGTTTAATATCTGTCAC AGTACAGAATACAATTTAGAGTTTTGATCCTCTATTACTCCCCTAACATTCCTTTCATAGACCCTCCTAATTGGAGTTCA ATTCTTATCAATTCCCCCTAAAAGCTCTGTTAGGACCCAATTGCAAGGTATGGGACTTGAGTCCCACATTGAAAGTATGA GATTCTAATGTGGGGTTTATAAGGCCTTGGGCTCTCCAACTACAACAGCTAGCTTTTGTGGTGTGGTTCTCCCAAGGTTC TTATCAAGCTCCTCCTGTCCTCGAGATGGAGGGTAAAGAAAGCTTCCTCCACCTTAGATACCAGCTCCCAACTATTTCTC AAATTCTGGAAGGGACTGCAGCTCCAAGTCACCATTTGATGCAGCGCAGGTTGCAAGCTTTGCCTCCTGTTGCACCTTCA ACTCATAATCTTTTGACAGTAAGGGAGGGAGTTGCTGTGCCTGCTGTCTCGAAACTTCCTTTTTCAACAGATTGACATGG AATCCAGGGTAAGTTCTGCTGTGGGAACTGGGAAGGTAATTCCAGCCTATAAGCAACTTAGTCAATCTTTTCTACCACTT TAATCAGGCCACTAAATCTGGTGCTAAGCTTCTGGTTGGGCCTTTTAGTCAATTATTTAATTTTGTAGGGTTGCCAGTTA AGAAATATCAAGTCAAGCTGTCTCCTATGCTTATTGGCTTGGGCCGTCATCTGATCCTGAGCCTCAATTAAATATCCTCT AAGTTCCTGTAACAGCTCATCTGTTTCTTGAGTTAGCCTGTTCACTTCTTCCACCTTAGTTCCTTTAAGAAACTTAGTAG AATCTTGGCCATACAGGGCCTTAAGTGGACATTGTCTCGGTTTGGTCTCTATCATTTATCTCAAATATGTCACTTGAATC TGATGAAAATATGTCTCTGTATATATCATGAATAGACTTGTACAATTTATAGATATAAAGAGAAAAAAGAAGTAAATCTA TCTAATTCTGTCTCTATTTTAATGGATGCTAATCTATATAGAGAAACAAATCTTATCTCTATTTCTAATCTATCATCACG AAATCATAATAATATAAAATCTTATTAATGGCTTCAAACGGCAACAAGAGGAGAAATAATCCTTCCCACAATGGGAGGAA ACAACTACGTCGAATTAGTAATATAACAAAGAGACAACTTGAAATCACATGCTCCTACAACGAGGAACAACCAATGGTTC GTCAAAGAACGCCAAACAGCAATACAAAAAAGGAGACTCACGTTTAAGTGCAGGGGCTCCAAGAACATCCAACAGTACTC CGAATCTGGGGCAAAAGGTCCCCTGGAATAGAACAACACCAGGAGGGGAAGGGGATCTTGTCTGTGCAATCGCGTCGGTG AACGAATGCTTGGAGGGTGGCGCGTACCGCTCACGTGCAGGGAGCGAAGCCACGAGTGGAACTCACTTGTAGAAAGAAAA AGGCGCGTCACTACTTCTCTGGTGACGGAACTTCAGGGAAAAAGGTAGATCGGGCACGGTGAGTCCAATGAAGGTATCTC CGGTTCTTTCGGAGCAACTTCTGAAACGACGGTGGAAGGATGTTGACGGTGGCTGCTAAGAACGCAACAAGGGCCACTAG GGTTCCAAAGAGAAAGAGAACTGTGACGGAGCAACAAACGAGTCACAGGGGTCACTAGTGTTCCATGAGAGTGGAAATTT GACCAAGAAGAGAACGGCCAAGGTAACGAGCACGGAAGCAGAGAATGAGAAATAAAAAATCCAAATAGATTTGGAAAGCC TCCGTGAGGGAGGAGAAAGTCCCTTGAGGGGGATGAGTCCCCTCACAACGGTTGCGCTAATAGAATCCCAACTAGCTCAG ATACCAACTTGTATCTGATGAAAATATTTCTCTGTATATTTCATGAATACACTTGTACAATTTATAGATATAAAGAGATA AAAAAGAAGTAAATCTATCTAATTCTATCTAAATCTATTTATGAATACACGTGTACCATTGGCCTCCTGTTTGGATACCC ACAACTCCTAGGTGGAGCTTTGATACCAGTGATAGGAAACTAGTATCATGAAAATTCAAGAAATGAATTGCCGCTATAAT TCCCCTCTCGTGCAGCCGTTTCAAGAAGGTATCAGAAACTAGCAGAGAATGGGTACAAGAGTTACAACACAAACTGTGTA TTTGACCCAACCTCTCCCTACATACAACAATTCTTATCCCTACTACCATGGGTTGCCCTCTTTTATATTACTAACCCACA ATTACCCACTAATTCACACTTTAGCTAACTGTCCTATCAGTAAAAATTTAATATCTCACAAGTTAGAGACAGAGTTTTAA TCCCCTTGCCAAGCCATCTTCTCATAGACCCTGCAAGTTGGATATCTAAATCTGAGGGGTAAACATTATTCCTATGAGAG AGAGAGAGAGAGAGAGAGAGAGAGGGAGACGTCTTGATCTAAAACATAAACCTAGAAGTCAGCATCAGCCAAAGGTTAGA AGGGTATGCTTGTGATCTTGTGACTGGATCTAAAAATTGCTTTTATTCTGTAATCTTGGGATAATAATTGACGACAGGCT GCCCCAAAATAAGCAAAATCTTGGCTAACCTTGCGTTTGTGTTCCAGTCTCCCTTCACTCAGATATTTAGGAATTTGGGA CAGGATTATCATCGGGAAGGGACCTGCATTGTGCATATTCTTAGAAGCAGTTAAACATTAAAAGTTGACAGTTGCATGCC AGTCAGTGTCAATGAACTCCTTAAAAGAACATCAACTCTATGGGGACAAGTAGAGTAGTTGATTATAAGAAAGGAGTCGC ATAATTGACCGAGTGAGTTCATTAACACTGTTATTGATTACATGAAATATTAAGAGCTTTATTTGAAATTTTTTTTTGAA GTATGATTGTTTTACCTTGAATGGTGTGATTGCCTTCAAGAGTTTCCCAAAGGAAGAGTGTTATATGTTGTGTCATTAAC TTGTTAATATATTTCATCAACCCTTCTATTTTGCGGTTTATTTTCATCTTTCCACTTTCCAAAATTTTTAACATCTTTGA TACAGGGACGTGTTAAGCAGAAATTATCAGCAAGGGGCAAATATGTGTCCGTAAACATAGGGCCTATCCAAGTTGTTTCC AGTGAACAGGTATTTTGGTCTTGCTTCCTTCATTCTTTTTCCCTCTCTAAATTAATTCCTTCTGGTTACCTTTTTCCTAA AGAACATGATATTCCATTTGTTTTATAGTAGATTGTGTCTCAATGCAGATTTTACCAGCTGAGCATACCTTGATAAGGAA TATTTTTGTATTTTTCAGGTCCAAGCTGTATATAATGCCATGAGGAGGGATGACCGGATGAAATATTTTTTGTAGTCTGT TTGTTAGGATGTGTATAGGATGCATTTTCAAAGGATATATTAACATGCAGGCTTTCTAGTTGTTAGGCTGATTTTAATCT TTGATCAATCCATGATTGGATCTCACGTATTTTATGAAGATGTTACTTAGTATGATTTGTCTCCAATCTTAATAAATAAT AGGGTTAAATAACTTTTTGGCTTAAATGCACATTTAGTCCCTCACTTGTACCCTTTGTGCAAAAATTGTCCCTAACAAAA TAAAAATTGTAGATGAGTTTATGGCAGTTAGATTATTCCCAAATCTGCCCCTTCCTGTCAGGTAAAAGATTCACTGGACT GAGCGGAGGGACATCAGTGGCTCACCGTGGCCATGGTCTCTCCCCCAATTCTGAAATTTTCATCCAAACTATGTAAATTT TTAATCTGGCCCCTGTCACAGTGAATTGTGAGAGGTGGTGAGTGAATCTTTGGATAGTCAACAAAATAAATGATCATCAA CTAATAAAAATAGCAAAAGC
CDS sequence (LotjaGi6g1v0097900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGTGCAGGGGCATGCTTGTGGTGGAACCGTTCCCAATATTTCAACGATTTTGTTTGAATTTGAATCCGAATAATCA CAGAAGAACCTTCAAATTCAATCCTCGTCCGTTTCAGTTTCACGGTGCCAATGGAGGAGGAGCACTCCGTTGCTCTCATG ATGAAACGCCGTCGTTTCAGGACGATCAAGGTGGTCCCCCTCAAGAAGCTGTATTGAAAGCCATTTCTGAGGTGTCTAAG ACGGAAGGGAGGGTTGGTCAAACTACCAACATGGTTATTGGTGGCACCGTGACCGATGATTCTACTAACGAATGGCTCGC GTTGGACCAAAAGGTGAACTCATACCCGACTAATCGGGGCTTCACTGCGATAGGAACTGGAGGTGAGGATTTTGTGCAAG CCATGGTTGTTGCCGTCGAATCTGTAATCCAACAGCCTATTCCTCAGGGACGTGTTAAGCAGAAATTATCAGCAAGGGGC AAATATGTGTCCGTAAACATAGGGCCTATCCAAGTTGTTTCCAGTGAACAGGTCCAAGCTGTATATAATGCCATGAGGAG GGATGACCGGATGAAATATTTTTTGTAG
Protein sequence (LotjaGi6g1v0097900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MACRGMLVVEPFPIFQRFCLNLNPNNHRRTFKFNPRPFQFHGANGGGALRCSHDETPSFQDDQGGPPQEAVLKAISEVSK TEGRVGQTTNMVIGGTVTDDSTNEWLALDQKVNSYPTNRGFTAIGTGGEDFVQAMVVAVESVIQQPIPQGRVKQKLSARG KYVSVNIGPIQVVSSEQVQAVYNAMRRDDRMKYFL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 36 | 195 | 160 | 4.1E-88 | – | |
| PANTHER | 36 | 195 | 160 | 4.1E-88 | – | |
| Gene3D | 108 | 195 | 88 | 2.0E-8 | – | |
| SUPERFAMILY | 109 | 195 | 87 | 1.2E-12 | ||
| Pfam | 112 | 195 | 84 | 4.8E-18 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi6g1v0097900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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