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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0099900 |
| Transcript ID | LotjaGi6g1v0099900.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Trihelix transcription factor GT-1; TAIR: AT1G13450.1 Homeodomain-like superfamily protein; Swiss-Prot: sp|Q9FX53|TGT1_ARATH Trihelix transcription factor GT-1; TrEMBL-Plants: tr|A0A0S3S173|A0A0S3S173_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0099900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:21678830..21684167) extracted from Lotus japonicus Gifu genome v1.2.
GACAAGTCGACCTCAAGTTCAGCCCCTTCCCACCGCAAGCAAAAGCTTTTACTTCACGCTGACACTTGATTGATACACAA ACCCTGAATCCCAATTTTACCCAACCAAGTCAAATCCTCTATTCTCTGTTGAACTCGAACAACACAGAGACAGAGAAAGA TAAGAACAACAACAACAACAACAGCAACAACATGTATTTATCAGAAAAACCTCGTCCCATTGATTTCTACAAACAGGAAG GGACACGAGACATGATGATAGAGGTGGTATCCAACGCTGAACTTCCACCGCCGCAACACCACCAGCCACCGCCGATGATC CTCGGTGAGAGCAGCGGCGAGGACCCGGAACTGGAGATCAAGGCTCCGAAGAAGCGCGCTGAGACATGGATTCAAGACGA GACGAGAAGCCTTATTGGGCTTCGTCGCGAGATGGATGCGCTTTTCAACACTTCGAAATCGAACAAGCATTTGTGGGAAC AGATTTCGGCGAAGATGAGGGAAAAGGGTTTCGATCGGTCACCCACCATGTGTACTGATAAGTGGAGGAACCTGTTGAAG GAGTTCAAGAAGGCTAAGCACCATGATAGAGGTGGGAGTGGCTCTGCTAAGATGTCTTATTACAAAGAGATTGATGAGAT CCTGAGAGAGAGGAGCAAGTGTGTGCAGTATAAGAGCCATACTCCTCCTTCCAAAGTTGACTCCTTTATGCAGTTTGCTG ATAAAGGTAAATTCATTTCATTTCTTTCTGTTTTCTCTCTTGTGCAATCATATGCTTGTTTGAATTCCCTTAATGTGTCA TGCTGCAGAACTTGAAATTGCATATGTTGGAGTTTACTCACTTTAGATGTAATGGTGGTTGTAAGGTTCAAACTTTGTTT GGCACAATGCAATGCATCAAAATTTAATTCTATGCTTATTGTAGAACCATACACTGGTCTTTGTGTAGGGTGTAATCAAA TGCCTTGATAGTAATTAGTTACACCCTACACAAAAGACCAGTGTTCTCTCAATGCAATGCATCGAACATGTTCGGTAAAC AAAGACCAAACAAAGTTCGGTAAACAAATATCTTGGGAAAATAATTGTTTTGTTTTCAAGTGTTCTATCAAGAAGCTTTT GATTAAAAGCGTTTATTGGCCCCAAAATATGCTAATTCAATCATGTTATTAACAAATTGCGTATGATGAACCTGCATCTA AGTTTGTTAGTAAGTGGGAACACTTGACATCTAATGCAGATGCATAGGCTGTTTGTGTAAAAGAAATTGTTTGTGCATCT TTAGTCAAAACCGAACAGTCTGTCGTTTACCAGCTCTGACAAATTTGTTGTGAAAAGAAGCACTAATTCGCTGTCTTTCT CAATCATTCTTGCTCTGGAATATTTGGCTTTGCTTCTGGTTTTACAGAGCGGATACAATCCGACAAAACATGTAACTGGA AAACCTGATTGTCATAGTTGTTACCGTTAAATGAACTACATATCCCTTATCCCCACAAATTTTGTCTCAAAAAAGTGCAT CCTGGTCAAAATTGCTGATTTGACATGCATTAATTGGTTTTTACACATTTCATTTTCACTCTTATTGCCTTGTAAAACAG AAATATGACGGAGTAATTGCCGTGTATAACTTTAGGAAGTTTCCTCGCAAAATACATTTATGTTTTGGTTGATACTCTTC CCTTAAGTTGTGAGCCTCAGTCTATATCGATTGATCTTAGGATTGATTATGATAGATGTGTTATTTATCTCTATCATGGT AGTTAGTATCGCATGTATTTCGCTATACGATGCGGAATCAACCCAGAACGATGCGACTTGTGCTTATGTATCTTTTTGTG TCTGAATCACACACCCTATCGCCTGAATCGTATCTCCTGGGTGTATTGTCCGATTCGAGCAGCTACACAGAGCAGCCAAA TTCAGGGTCGGGTCACGCGACCCGGTTTCCATTTTGGCCTTTCTTTTGTTTCTTTTGCAATTTTTCTTTTAAAACCTGTT CAGATACTCGTGCAGTATTTCTAAACCCTTTGGCCCCATTAACCATTATAGAAACCCTAAGGCACTGCCCTGCTCCTATC TTTCATGCGCACGAGAAAATTCTGGTCTCCCACCTCTATTTTTTTCAGTGTTCGGCCACCGCCCTCTCTTGTTCATCGCA CCTTGAAGTCCCTTACGCGTGCAACAGTAATTTTTTTCCCTTTCCTATTCTCATTTGGTACGGTTTGGTTATTTGGTTCA TCACACCTTGCTTAGCCTCATTTGGTACGGTTTCAACATTCATAATGGGACAGCCAGAGGAAGAAAGTAGAGAGAGCCAA AGACATCACACATTCATAACTGGTTTGATTTATATTATGATTATTTAATATTTACTAGGATCCAAGTATAAGCAAAGTAA ATTGCATTTTGTCATTTTATTGATATTTTTTAGAGGTGTTGAACACTTGAACTTTGTGTAACCAGCAACTATTTTTCTTC TTTTGGCTTCGATTTTTAATTATTTTGAAGTATATTTATATGGTATATCAGATTGTTATTCAATTCATGACTTAATTATT TTGTATCTGTATCTTACGATACATTAAACGATACGTTTCACAATTCAAAAATTAGGGTCTTCCAATACACGATACGTATC TCAATTTGATAACAATTATCTCTATGCATTTGATTTTTGAAGCACAATATCTTATCACACTCTTGTGAAGCCACAGTAAC TTTTCCTAGGTTATCATTTGCAAATGTCATTTGGATGTCTGCCAGTTATAATATCACTCATTTTGACTTTGGGAACAGTT ACTTGACTGGTTATGTTGCTGTGCAGGTATTGATGATACCAGCATTTCTTTTGGGCCAGTTGAAGGTATGTCATTGTAAT ACAACTTTCAGTTTCCCATTTTCTATTACTGATGTTTTATCTGTTTTAGGGATATATATATCTCTGATTTTAGGGAGAAT GGGGATGTTGTTGTTGTTATTGTTAGTAGATTGTGGACAGAGAACATTCTCTGTAGGAGAGACTTTATCTCTAGGACAGC AAGTAAAATTGCTGTATATATGTTATTTCTGTTCTGTTTGATACATATTTCATCAGTTAACTTCTGGTGTTGTATCACAT GCATTGCATGCCAAATTAACCCCTACTATGACAGCTTTTAACCATTCAGATATTGCTTTGTCTTGTAATTGTTTCCATAT AATGAATGGGTAGAGTGGGATAAATAATGAAATGCTACTTTAAATAGCTGGTTCAAATGAGAATTCAAATGCTGTACTAT GTAGGGATTTTCTGCTTATTGTGTTTTACTAGGAATTCACTCTGTTGATGTGCAACCTGGTAGTTATTACTTCATATTGT GGTAAAGTATTTTTGCTTTGTACTGCTGATAGTTTATCAGTTTCTCTAAAATATTGTCTAGTTCATCAAGTGTATGCATG ACGAGGTAAGTATTTGTTCATATAGTGGGAGGTAGTATTCATAATCATACTGCTTACTGCTTACAATTGATTAGTTTTCT TAAAATTCAAATGTCTGCATTTTGCAGCAGTTAAATAGCCACAGTCGGTATGTGATACTAGTTATCACTATTTTAGCATT TTGGAAATTGAAAATGAAACTCTGACCAACTCGGGAGAGTGTTCATTGATAAGAATTTTGATATGTCTGATCTCATTTAG ATGTTTATATTCCTTCTTTCCAAAGTGGTAGTTGCCACTTCATGGCTCTCATAATTCTCATCTATTTGGCATTTAGCTGC TGGAAGACCAACACTCAATCTTGAGAGAAGTTTAGATCATGATGGACATCCTCTTGCCATTACCGCAGCTGAGGCTGTTG TGGCAAGTGGAGTCCCTCCTTGGAATTGGAGAGAAACAGAAACTCCTGGAAATGGTAAGCTGCTGATGCTTTCTCCCCAC TTTTTTCTTATAGCTTAATTGCTTTCTTATTTCTGATACCAATTCTTCCTATTTTTTGCAGGTGGTGAAAGTCAGTCATG TGGAAGGGTTATTTCAGTCAAGTGGTGTGATTATACGAGACGAATAGGTATTGACGGCACCCCAGAAGCCATCAAGGAGG CAATTAGGGCTGCTTTTCGGTTGAGAACTAGACGTGCATTCTGGTTAGAGGATGAGGACCAGATTATCAGAAGTATTGAT CGTGACATGCCTATAGGCAATTACACTCTTCACCTTGATGAAGGTATGGCTGTTTATTCTTCTACCTAATTTGTGCAAAA TTTTATGGTTTTTTTCTTTTCTTTTACTGTCTAGGAGCTTGTGTAGTTAGGTTCTTGCTGAGCTTGTGGAACCTACATGG TGACTAATTATTAAACATGCTTCCTTCTCTTCCTCTTCCTTTATTGGAAGTGTGGTTAAACAGTAAATTATCATTGCAGG AATGGCTATTAAAGTATGCCTTTACGATGAGCCTGACCATATTGCTGTGCATACTGAAGAGAAGATATTTTACACCGAAG ATGATTACCGCGATTTTCTGACGCGTCGTGGCTGGACTTGTCTAAGAGAATTTGACGGCTATAGAAACATTGACAATATG GATGATCTTCGACCTGGTGCCATATATCGTGGGGTGAGTTGAGGGCAGATGCATGGTATGATCTAACTTAGCGATTTGCA TCAAGTGTATAGTGGACTAAGGGGGGAGAGAGTTAAATCTTTTGATATATGTGAAGCAGTAACCTGAAACTGTATTTGTG TAGCTTTTTGATAATGCTGTTAATAGTTTATGTCTTGGTGGTAGGAAAATGAACATGTACCTCTGCAGAAATTCCGTTCC TATCATTGGTCTCAACTTTCTGTAAATATGAAGTTGCTGTTAGAACATATTGTTGTCAAGATATTATGTAGGATCATTTT TATCATTTTTTTACTTCTAGGTCTATGAATTTTTCTGACGTGCTTGCCCTAGCAAGGGAGTTTTTCTGTCCTTGTATTCC ATTCATACATATACCGAATGAATGGAAGCCAAGGTAGACCAATTTTTTCTGACATGCTTATCCTAGCAAGTAAAAAAAAA TTGTCTTCATAATGAGGCTTTTCATTGAAAGTATGACACACGGTCTTGTATTATTATTATCTTTTTTTTTTGAGTGGAGA AAAGTGTTATTTAAAAGCAGCTAATTTTTGTGGGAGCGTAGATACTGGATATTATAGGAGTATTGAAGTCATAACCGTTA ACTTTTGTGTGGAATTTATTATGGGGATTGGTTTGTGCACATAGGTCGGGTTGGATGGATTTTGGTCAAAATAAAATCCG AACCGATCAAAATTGACTGGGTTGGGTTGGGTTGGATTTCACGAATTTCTTCTTCGGA
CDS sequence (LotjaGi6g1v0099900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTATTTATCAGAAAAACCTCGTCCCATTGATTTCTACAAACAGGAAGGGACACGAGACATGATGATAGAGGTGGTATC CAACGCTGAACTTCCACCGCCGCAACACCACCAGCCACCGCCGATGATCCTCGGTGAGAGCAGCGGCGAGGACCCGGAAC TGGAGATCAAGGCTCCGAAGAAGCGCGCTGAGACATGGATTCAAGACGAGACGAGAAGCCTTATTGGGCTTCGTCGCGAG ATGGATGCGCTTTTCAACACTTCGAAATCGAACAAGCATTTGTGGGAACAGATTTCGGCGAAGATGAGGGAAAAGGGTTT CGATCGGTCACCCACCATGTGTACTGATAAGTGGAGGAACCTGTTGAAGGAGTTCAAGAAGGCTAAGCACCATGATAGAG GTGGGAGTGGCTCTGCTAAGATGTCTTATTACAAAGAGATTGATGAGATCCTGAGAGAGAGGAGCAAGTGTGTGCAGTAT AAGAGCCATACTCCTCCTTCCAAAGTTGACTCCTTTATGCAGTTTGCTGATAAAGGTATTGATGATACCAGCATTTCTTT TGGGCCAGTTGAAGCTGCTGGAAGACCAACACTCAATCTTGAGAGAAGTTTAGATCATGATGGACATCCTCTTGCCATTA CCGCAGCTGAGGCTGTTGTGGCAAGTGGAGTCCCTCCTTGGAATTGGAGAGAAACAGAAACTCCTGGAAATGGTGGTGAA AGTCAGTCATGTGGAAGGGTTATTTCAGTCAAGTGGTGTGATTATACGAGACGAATAGGTATTGACGGCACCCCAGAAGC CATCAAGGAGGCAATTAGGGCTGCTTTTCGGTTGAGAACTAGACGTGCATTCTGGTTAGAGGATGAGGACCAGATTATCA GAAGTATTGATCGTGACATGCCTATAGGCAATTACACTCTTCACCTTGATGAAGGAATGGCTATTAAAGTATGCCTTTAC GATGAGCCTGACCATATTGCTGTGCATACTGAAGAGAAGATATTTTACACCGAAGATGATTACCGCGATTTTCTGACGCG TCGTGGCTGGACTTGTCTAAGAGAATTTGACGGCTATAGAAACATTGACAATATGGATGATCTTCGACCTGGTGCCATAT ATCGTGGGGTGAGTTGA
Protein sequence (LotjaGi6g1v0099900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MYLSEKPRPIDFYKQEGTRDMMIEVVSNAELPPPQHHQPPPMILGESSGEDPELEIKAPKKRAETWIQDETRSLIGLRRE MDALFNTSKSNKHLWEQISAKMREKGFDRSPTMCTDKWRNLLKEFKKAKHHDRGGSGSAKMSYYKEIDEILRERSKCVQY KSHTPPSKVDSFMQFADKGIDDTSISFGPVEAAGRPTLNLERSLDHDGHPLAITAAEAVVASGVPPWNWRETETPGNGGE SQSCGRVISVKWCDYTRRIGIDGTPEAIKEAIRAAFRLRTRRAFWLEDEDQIIRSIDRDMPIGNYTLHLDEGMAIKVCLY DEPDHIAVHTEEKIFYTEDDYRDFLTRRGWTCLREFDGYRNIDNMDDLRPGAIYRGVS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 28 | 378 | 351 | 2.5E-186 | – | |
| PANTHER | 28 | 378 | 351 | 2.5E-186 | – | |
| ProSiteProfiles | 58 | 122 | 65 | 8.351 | ||
| CDD | 64 | 129 | 66 | 8.06915E-29 | – | |
| Pfam | 65 | 150 | 86 | 1.7E-20 | – | |
| Gene3D | 66 | 128 | 63 | 4.5E-25 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi6g1v0099900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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