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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0141600 |
| Transcript ID | LotjaGi6g1v0141600.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | weak chloroplast movement under blue light protein (DUF827); TAIR: AT5G55860.1 weak chloroplast movement under blue light protein (DUF827); Swiss-Prot: sp|Q9LVQ4|Y5586_ARATH WEB family protein At5g55860; TrEMBL-Plants: tr|I1N092|I1N092_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0141600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:40913467..40918989) extracted from Lotus japonicus Gifu genome v1.2.
CAAAAATGCAGGACCTGACTTGCCCTTTTGCTGTCTAGTATCTCTCTCTCTTTCTCTCACCATCTAGTAGTACATCTTTT TCATTTCCCTTGTTTATGGTCCTCCACATCATCCACGAGTGTTATCCTGGACGGTGCTCCTGATGACGTGGCATACCCAC TTTTGTTGTAAACTCTCACCCTTTTCTCACACAAAGATAAATGGCTAATTGAAACTCGACCCACGACCCACCTGATAAAG TCGTGATCCGTTTGTAAAACTCGTAGTTACTAATCAGTCAATCGATCGTGATTCTTGTATTTTGATGATGTTTTCTCCTG ACAAAATCGACTATTTTAGTTTTAGCTCGAATCCGACTGAAACCACGGGCCGGCGGGTGGATGACCCTACACAAAAGCAT TACTAAGGACAGAAACGTCATTTCCCAAAACATAATGCAATAGAATCGGCTATACCTGATCCCTGACTCTCATCTCCTCG GCTTTTTCCTGATACACTCCAAATTTGTCTTGAACAGGTTCCTGAATTTTCAAATCAAACCTATCTATCACTTTCTCTCT CTAACACGTCCTCTCTCTCTCTCTCTCTCTTGTTCTCTTCAGATTCAACTCCCGGGAATTTCTCACTGTCTTCAAATTCT TCACGAATCAGATTTATATAGAGGAAGCCTTGAGAGGTGAGTTTCTATTTTAATGGATTTTGTTGATGATTCTGTTGAAG TTGGAAACTTTAGTGGTTTTGAGATTCTGGGTTTTGGAGTATTTTGGATTTTCTTTCTGGGTTTTTTTTTTGTTGAGGAA TTGTCTGAAGATGCTACTTTCTAGTGTTTTTTTTTTTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG TTGTTGGTTGCTGTTTTTGCTTTGTTGGTCGCTGTTTCAATTTGAGGTTTGTTTGATGATGTTTACTGTTGTTTTGACCG GCTTGTTGTTTTGTGCTGAATGACTTCTAATTTGCAGTGTTCTTCACTCTGCTGTGTGTGATTGTGACCTGTGACTTGTG GGTGCCGGAAAGTTTCTATTCGAGTTTTGGAAAATTAAGTTCATTTTTTAATATTTATTATATTTTGATTGGTTGGTGTT CTTTTTTGTTCTGAAGGCAGTGCTTTGGCATGGTGGAATTTGTGGTGTTTTGTTGGTACTATTTTTACATGCCTAATTTG AGTTGCCTGCAATTTTTTTGCATTTTGATTTTTGGAACCTATTTGCACAACAGAAAGCTCCTGAAATTTCCAACTCATTT TATGGTATGGGTTTTCGAAGTCTGAGTCTTAAGATGTATATAGAGCTAAAATGTAATTGATTCTTTGGTGGCTTTATGCA TGTGAGGGGTGTTGCGTGGACAGAAGTTCCCGTTTTGTGATGAGTATGCAGTTTTTAATGGTTTTTACTTGCTGGATGAT ATTCTGGAATCTTGGAGAGTGTGGAAACTTAATTTAATGTTTACTGATAGGTCAAAGCGGTGCTTTCAGAGAGAATCTTA CTGTCTATCGACCCAAAGGCCAGTAGGATTACGGATTATACATTATTCCTATCATATCTATATTGAGTATTGACACTGCA CAAGTATCAGTTTTCCCTTGGTGGGAGAATGATCCTTTGTCTCCCACAAAGTCAGTGTAAACAGTTATTGGGTATCTGTA GTTTTGTTTCTTTAACTTACTTGGTGGTGGTCTTTCTGGATGTTTGAAAAGAGATTTTTGAAATATGGGATTGTTTTAAG TTGGATATGCATAATTAATAGTGCATGATGATAATAACTTTTTTTCCTATCATGTTTATATCAGGTTGGAATTGGATACT TGGCTTCAAAGTCCTTAGTATTTAGATATAGCACACAATGGTAGCAAGAATCAAGCAAACTTCTACTGACTCTCCCAATC CAAAACCAGAGGTTGGAGAGATTGACACTAGCCCACCTTTTCAGTCTGTTAAAGATGCTGTGTCTCTATTTGGTGAAGGT GCTTTTTCTGGTGAAAAACCTATGTATAAGAAGTCAAAACCGTATTCTGCTGAGGTAATTGTCAGTTTAGTAGTCATAGT TGTTTTCAACTACAATTCCCTTGCAATGTTGGAAAACTATTTTGAAAGTTGCATAATGCATGCTGTAAATTTCATTAAGT GGTAACTGTTTCAATAGCATGCGTTAAATCTAGTTACCTAGTATACTTAAACTAAATATTGTCTGATTTTCTTCCCATTT TGCAAGGAGGCACCCTTGCAAAAAAGGAGGCACCCTTGTATGATGTTGTGCTTCTTCAACTTTATTCAAGAACAAAGTTG CATAATGCATGCTGTAAATTTCATCAAGTGGTAACTGTTTCAATAGCATGCGTTGAAGCTAGTTACCTAGTTTACTTAAA CTTTCACACTATTATATTGTCTGATTTTCTTCCCATGTTTTCCATATTAAATAATAAAATTGCAGTAGGAATCTATTTTT TAATCGGATGCCACAAAACTTAAGGGTGCCTCTGGTTTATGGAAATCTCTTCTGCTTTCACTAATAAACACCAACATTTT GCTGTTTTGTTAGCTTGTATTATCTTTTGTTTGAACCAACTACCCGAAAGTTTAAGTTGTTTAGTAAAGACACGTGAATG ATTTTATATTATATTTCTAACATGTCCCCTCTTGCAAGAGCCCACTGGGCTAGAGGTGTTAGCAATGCACATGTCCATTG ACGTTGTGCTAAAATTTACTTTTTATTGGAACAGTGGGGTAACGAAGATCGAACTCCATAGCACTTGGTGATAGAGCTTC TAATATTATGTCATGAACCAACTATTCCAAAAGCATTAGCTATTTGGTGACGGCACAAGAACAACTTAATTATATTTCTA ACATCTTAAAAAACAAAAAATAAGGTGAAAACAATGTGATGATTTGTCGTCATTAATAAGATAAAAAATGTGGAAACAGA AAACACTTAAACCAAACAGGCCCTGAAATATAATCTTACAGGCTGTTCTGACCACTGAACTATAGGTTATCTGATTAATT TTAATTTCCTATTTCCTTCTTCCAAGGTTAGATTTGAATGTGCTTAATCTGTTTGGCTTTGTAATTTATACGTGTTTGTT CTTTCACTAGAGAGTTTTGGCCAAGGAGACAGAACTTCATGTAGTGCAAAAGGAGCTGAACAAGTTAAAGGATCAAGTAA AGAATGCTGAAACTACCAAGGCTCAAGCTCTTGTGGAGCTTGAAAGGGCTCAAAGGACGGTTGACGATCTGACACAAAAG CTAAAAGTTATCAGTGAATCTAGGGAGTTAGCAATCAAGGCAACAGAGGCTGCAAAATGTCAGACAAAACAACTTACAGA AGAAAAATATGGTGACCCGGATGGAACTAATGGTGCTTGGAAAGAAGAGTTAGAAACTGCAGTTAAAAGGTATGCATCTG TGATGACAGAACTTGATGCTGCAAAGCAAGAACTGAGGAAGACTCGTCAGGAGTATGAGTCATCCTTGGATGCAAAGTTG TCTGCTTTCAAGCAAGCTGCAGAAGCTCAAGGAGCAATGAAGGAAAATACAGAAAGAATGGCTGAGCTGTCTAAAGAAAT TTCAGCCGTAAAGGAGTCAATTGAGCAAGCGAAGCTTGCATCTGTGGAAGCACAGCAACAACAAGCGACAATATTAGCTG AGAAAGATGTTCTAAGACAATCATATAAAGCTACCCTTGAACAATCTGCTAAGAAGTTAATAGCTTTGAGAACAGAATTC AATCCTGAGCTTACCAAAAATCTTGAAGTACAGCTGGCCGAGATAGAGAATGAAATTGGAGCTCTGCAAAAGCAAATGGA AAGTAAAAGGACGTCCGACTTGGACTCTGTGAAAAGTATCACTTCAGAACTTGATGGTGCTAAGGACTCACTGCAGAAAG TAGCAGATGAGGAAAACTCTCTTAGAAGCCTGGTGGAAACTCTTAAGGTGGAACTAGAAAATGTAAAGAGAGAACATTCT GAATTAAAGGAGAAAGAAGCTGAAACTGAATCCATTGTTGGTAATCTGCATGTCAAGCTTCGCAAAAGTAAGTCTGAGCT TGAAGCCTGCTTGGCAGAAGAATCCAAAGTTAGAGGTGCAACTGAGGAGATGATCTTGACGCTGAGTCAGCTGACAGCTG AAACTGAAAATGCACGGCGGGAAGTAGAAGATATGAAGAACAAGACAGCCGAATTGAAGAAGGAAGCAGAAGTTACCAAA CTTGCATTAGAAGATGTGGAGAAAAACCTTAAAGTAGCACTTGAAGAAGCAGAAGAAGCCAAAGCAGCTGAGGCTGGTGC TCTCAACCAGATTACGGCATTATCTGAAAGGGCTATCGCTGCACGCTCGTCAACATCTGAATCTGGTGCTGTAATTACAA TCTCGAAGGAGGAATTTGAGGCACTAAATCGGAAAGTTGAGGAGTCTGATAAATTAGCCGACATGAAAGTCGCTGCTGCC AAGGCTCAGGTTGAAGCTGTGAGGGCTAGTGAAAATGAGTCTATCAAAAGGTTGGAGACAACTCAGAAGGAGATTGACTA TATGAAGACTGCGACACAGGAGGCCTTGAAAAAGGCTGAGATGGCTGAAGCAGCAAAGAGGGCAGTGGAGGGTGAGCTTC GAAGGTGGCGCGAGCGGGAGCAGAAAAAGGCAGCAGAAGCTGCATCTCGAATATTGGCTGAAACACAGAGGTCGCCTCAA GCATCTCCTCAGCACTATATGATTCAAAAGCAGAATCCTCCTCATACAACAGTGGAGGTCAAGAAGTTTGAAAAGGAGAA GGTTTCAGTTTCAAAGAAAGTTCTCTTGCCTAATATCAGCGGTATTTTCCACAGGAAGAAAAATCAGGTTGAGGGTGGAT CTCCTTCTTATCTGCCTGGTGAAAATCCTGTATGAAATTTGAAACTTGGAGTAGTTTGTGAAGTTCCTGAATTGGTGAGA GAAAAAATGGATCTGTGTGCAGCTAAGAAATTTGATCAGATTTTGTTTATGTAGTGTAGTCTGTTTGAAGGAAAGAATTG TGTGGTGTTAATAGTTTTGATTACAAATGGGGGGAAGCTTCATGTAAATGGAACTAGTAGTAAGATTAAAATCTAGTGGT ATTTTTCTGTTGATACTAAGCTTTCGTGTGTGGTAGGTTTAACTCTTCCAATGCAAGGGAGGGAACAAATTAAGTGAAAA CACTATCTTGTTTTTTTTTTGCTAATGAAAACACTATCTTTTATCGCACGTATATGGTAAAATGTTCGAAGTTATAATTA GGTTAATTGTCACTCATAATAGTGTTTTAATTTTAATCTAATATAGATGATTAATAGAAACTTCAACACCATAATTTAAG AGTTAGGAAATTTTATATCTTGTTTGACAATATCATTCCATATATTTATTTTTTTAAGAAAACCTTTGAAGTTAGTATTT CATCACTTCTTTTCATTTTTAATATAAATGATTTTTATAGAAAGAAGAGATTTTTGTTATGCTTTAGTGCTATTGGATTT CTA
CDS sequence (LotjaGi6g1v0141600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTAGCAAGAATCAAGCAAACTTCTACTGACTCTCCCAATCCAAAACCAGAGGTTGGAGAGATTGACACTAGCCCACC TTTTCAGTCTGTTAAAGATGCTGTGTCTCTATTTGGTGAAGGTGCTTTTTCTGGTGAAAAACCTATGTATAAGAAGTCAA AACCGTATTCTGCTGAGAGAGTTTTGGCCAAGGAGACAGAACTTCATGTAGTGCAAAAGGAGCTGAACAAGTTAAAGGAT CAAGTAAAGAATGCTGAAACTACCAAGGCTCAAGCTCTTGTGGAGCTTGAAAGGGCTCAAAGGACGGTTGACGATCTGAC ACAAAAGCTAAAAGTTATCAGTGAATCTAGGGAGTTAGCAATCAAGGCAACAGAGGCTGCAAAATGTCAGACAAAACAAC TTACAGAAGAAAAATATGGTGACCCGGATGGAACTAATGGTGCTTGGAAAGAAGAGTTAGAAACTGCAGTTAAAAGGTAT GCATCTGTGATGACAGAACTTGATGCTGCAAAGCAAGAACTGAGGAAGACTCGTCAGGAGTATGAGTCATCCTTGGATGC AAAGTTGTCTGCTTTCAAGCAAGCTGCAGAAGCTCAAGGAGCAATGAAGGAAAATACAGAAAGAATGGCTGAGCTGTCTA AAGAAATTTCAGCCGTAAAGGAGTCAATTGAGCAAGCGAAGCTTGCATCTGTGGAAGCACAGCAACAACAAGCGACAATA TTAGCTGAGAAAGATGTTCTAAGACAATCATATAAAGCTACCCTTGAACAATCTGCTAAGAAGTTAATAGCTTTGAGAAC AGAATTCAATCCTGAGCTTACCAAAAATCTTGAAGTACAGCTGGCCGAGATAGAGAATGAAATTGGAGCTCTGCAAAAGC AAATGGAAAGTAAAAGGACGTCCGACTTGGACTCTGTGAAAAGTATCACTTCAGAACTTGATGGTGCTAAGGACTCACTG CAGAAAGTAGCAGATGAGGAAAACTCTCTTAGAAGCCTGGTGGAAACTCTTAAGGTGGAACTAGAAAATGTAAAGAGAGA ACATTCTGAATTAAAGGAGAAAGAAGCTGAAACTGAATCCATTGTTGGTAATCTGCATGTCAAGCTTCGCAAAAGTAAGT CTGAGCTTGAAGCCTGCTTGGCAGAAGAATCCAAAGTTAGAGGTGCAACTGAGGAGATGATCTTGACGCTGAGTCAGCTG ACAGCTGAAACTGAAAATGCACGGCGGGAAGTAGAAGATATGAAGAACAAGACAGCCGAATTGAAGAAGGAAGCAGAAGT TACCAAACTTGCATTAGAAGATGTGGAGAAAAACCTTAAAGTAGCACTTGAAGAAGCAGAAGAAGCCAAAGCAGCTGAGG CTGGTGCTCTCAACCAGATTACGGCATTATCTGAAAGGGCTATCGCTGCACGCTCGTCAACATCTGAATCTGGTGCTGTA ATTACAATCTCGAAGGAGGAATTTGAGGCACTAAATCGGAAAGTTGAGGAGTCTGATAAATTAGCCGACATGAAAGTCGC TGCTGCCAAGGCTCAGGTTGAAGCTGTGAGGGCTAGTGAAAATGAGTCTATCAAAAGGTTGGAGACAACTCAGAAGGAGA TTGACTATATGAAGACTGCGACACAGGAGGCCTTGAAAAAGGCTGAGATGGCTGAAGCAGCAAAGAGGGCAGTGGAGGGT GAGCTTCGAAGGTGGCGCGAGCGGGAGCAGAAAAAGGCAGCAGAAGCTGCATCTCGAATATTGGCTGAAACACAGAGGTC GCCTCAAGCATCTCCTCAGCACTATATGATTCAAAAGCAGAATCCTCCTCATACAACAGTGGAGGTCAAGAAGTTTGAAA AGGAGAAGGTTTCAGTTTCAAAGAAAGTTCTCTTGCCTAATATCAGCGGTATTTTCCACAGGAAGAAAAATCAGGTTGAG GGTGGATCTCCTTCTTATCTGCCTGGTGAAAATCCTGTATGA
Protein sequence (LotjaGi6g1v0141600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVARIKQTSTDSPNPKPEVGEIDTSPPFQSVKDAVSLFGEGAFSGEKPMYKKSKPYSAERVLAKETELHVVQKELNKLKD QVKNAETTKAQALVELERAQRTVDDLTQKLKVISESRELAIKATEAAKCQTKQLTEEKYGDPDGTNGAWKEELETAVKRY ASVMTELDAAKQELRKTRQEYESSLDAKLSAFKQAAEAQGAMKENTERMAELSKEISAVKESIEQAKLASVEAQQQQATI LAEKDVLRQSYKATLEQSAKKLIALRTEFNPELTKNLEVQLAEIENEIGALQKQMESKRTSDLDSVKSITSELDGAKDSL QKVADEENSLRSLVETLKVELENVKREHSELKEKEAETESIVGNLHVKLRKSKSELEACLAEESKVRGATEEMILTLSQL TAETENARREVEDMKNKTAELKKEAEVTKLALEDVEKNLKVALEEAEEAKAAEAGALNQITALSERAIAARSSTSESGAV ITISKEEFEALNRKVEESDKLADMKVAAAKAQVEAVRASENESIKRLETTQKEIDYMKTATQEALKKAEMAEAAKRAVEG ELRRWREREQKKAAEAASRILAETQRSPQASPQHYMIQKQNPPHTTVEVKKFEKEKVSVSKKVLLPNISGIFHRKKNQVE GGSPSYLPGENPV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 15 | 15 | - | – | |
| PANTHER | 1 | 640 | 640 | 1.3E-273 | – | |
| MobiDBLite | 1 | 28 | 28 | - | – | |
| PANTHER | 1 | 640 | 640 | 1.3E-273 | – | |
| Pfam | 21 | 571 | 551 | 1.3E-63 | ||
| Coils | 61 | 116 | 56 | - | – | |
| Coils | 153 | 187 | 35 | - | – | |
| Coils | 195 | 236 | 42 | - | – | |
| Coils | 274 | 301 | 28 | - | – | |
| Coils | 327 | 361 | 35 | - | – | |
| Coils | 397 | 452 | 56 | - | – | |
| Coils | 548 | 568 | 21 | - | – | |
| MobiDBLite | 569 | 604 | 36 | - | – | |
| MobiDBLite | 582 | 604 | 23 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi6g1v0141600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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