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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0150900 |
| Transcript ID | LotjaGi6g1v0150900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Disease resistance protein; TAIR: AT3G07040.1 NB-ARC domain-containing disease resistance protein; Swiss-Prot: sp|Q39214|RPM1_ARATH Disease resistance protein RPM1; TrEMBL-Plants: tr|I1NDY1|I1NDY1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0150900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:42719157..42721653) extracted from Lotus japonicus Gifu genome v1.2.
GTTGGTTGGTTGGGGGACCAGCAGAGCGCACTGTGATCTCTGTTGTGGCCATGGGAGGGCAGGGGAAAACCACTCTTGCC AAGAAAGTTTTTGACAACCGGAAGGTGATAGACCACTTTGATTGTCATGCTTGGATCACAGTATCTCAATCCTACTCCAT AGAAGGGCTGCTGAGAGACATGTTGCGGCAGTTTGGCAATAAAAGGAGTGATGTTACTACAATGGATCGAAGGCAACTGA TTGATGCGGTGAGAAACTGCTTGCAGCAAAAAAGGTACGTTGTCATGTTTGATGATGTGTGGAATGTGCTTTTTTGGGAT GAGATTCAATTTGCTGTCGTTGATAATAAAAATGGATGTTGTTGTGTCTAGTAGAATCTCTTCTCCTTTTGTCGAAGTGC ATGAGTTGCTGCCTTTAACTCTTGACCAATCTTTAGAGCTGTTCTATAAGAAGGTATTCCAATTTGACTTTGATGGGCAT TGTCCAGAAGATCTGATTGATATATCTCGTGCGATTGTTAAAAAATGCAATGGATTACCACTAGCAATTGTGGCCATTGG TGGTGTTTTATCTGGTAGAGAAAAAAAAGCACTTGAATGGGAAATGTTTTTTCAAAGTCTAAGTGAAGAGCTTAGGAAAA ATCGCCATTTAGATCATATAACGAAGATTTTAGGTTTCAGCTATGATGATTTGCCTTACCATCTTAAACCTTGCTTCCTA TATTTTGGAATGTACCCTGAAGATTATGAAGTCAAATCGAGAAGATTGATTATGCAGTGGATAGCAGAAGGGTTTGTTAA GGTGGAAAGGGGGCGAATCTTGGAGAAAGTTGATAAAGAATATTTAAGAGAGTTGGTTCATCGAAGTTTGGTGCTAGTAT CAAGTCGCCACAATGGTGGAGTTAAAGTTAAACATTATCGTGTTCATGACGTATTGCGGGAGATGATCCTTACCAAATTT AAGGATTTAAGGTTTGGTCAATTGATCGGTGAAGGTGATCATCAGTCAATGCCAGTCTCAAGCCGACGTCTATCACTAGC AACTAATTCTGAAATTTTAATGAGAGGTGATAAAATGAGTTCACAGTTTCGGTCATTGCATATTTTCACAGATGAATTAA AAGGAGATATTTTGTGGAGAGTCCTTAAAGAATACACGCTATTGAAGGTACTTGATGGTGAGGATTTCAATGGGTTCTCT GTCCCTGGTAATATTGGTAATTTGGTCCACTTGAATTATTTAAGTCTACATGCAAATTATGGTTTTCCCATGTCCATCAG TAAGCTCCAGAACCTACAGACCTTGATTATACAGGGAGAAAATGAGTATGAGATTCCAAAGGAGCTTAGCAAGCTCCGAA GACTAAGACACCTTGTGGGCAACAACATGTCTTTAACTTCATTGAAGGATGGCATTGGAGGCTTGACTTCTCTCGAAACG CTAGAGAATGTGGAATTACGTTGCAATGCAATTAGAGAGCTCGGAAAGCTTAAGCAGTTAAGAGTGTTGGGATTGATCAC TAAGGAGACACATAAGGAAAGTAGTCTATGGTCCTCATTAAATGAGATGCAACACTTGGAGAAGCTGACTCTTTTTACTG TTGAAATATGGGGATACATTGAATTGAACTTTATTTCACCTCTACTTTATTTTACCTGTAGTTCGAGACTGGGTTCCACA ATTCCCAAATCTTGTCAAATTGATCTTGAAAAACTCCATGTTAATGGATGATCCACTGAAATCACTACAAAATATGCCAA AATTGTCATCTCTCACACTCTATGATTGTTATAAAGGTCAAAGTTTGCATTTTGAAGGTGGAGGGTTTCAGAAACTAGAG GAACTGCACCTTGAAGGCTTGTATAACTTGAAATTAATCTTTATCGAAAAAGGAGCATTGCCTTCTCTTAAAAGGCTCTG GTTATGGTATATATCTAAACTCAAGATTCTACTACCCCCTGGTATCCATCGCTTAGAGACAATTGTAGTGGTCAACATTC AAAATTCATCAGTTGAATTCATTCACCAAAACTTGATGGACATTGAACAACATCCAACTTCAAGGGAAAAGAACCAGGTG CATATTTCTTCCTGAAAGAATTTGAAAAGAAATGAAATATATATAAAATCTGTTATTGTTTGGAACCATCAACAATTATT TACTTGTATTTTTTCATCAACCAACAATATCACCAATGCTACTAAGTACTAACATTGTGCTCTGAATTGCTAGGTGTTGG GCTAATTTGAATTCTTCATGTGGTCCTTCTCAAAATTGGCATTGTATATGTCTGTTGTTGCTGCTCTAGCACTTAAGTTT ACGAATAAAGAGAATATGTATATTTTTTGTTGTCTTATAAAAATATGTAAAACCTACTGCATAAATGAGTGATTCAAGAC ATTTTGCTCTTGGTTTAAATTGTTTGTTGTTTGTGTTGTATGACTTACCACCATGTTGTAAGAGTTTCTGTTTTATGGAT TCTATGACTTGTTTTCG
CDS sequence (LotjaGi6g1v0150900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTAATGGATGATCCACTGAAATCACTACAAAATATGCCAAAATTGTCATCTCTCACACTCTATGATTGTTATAAAGG TCAAAGTTTGCATTTTGAAGGTGGAGGGTTTCAGAAACTAGAGGAACTGCACCTTGAAGGCTTGTATAACTTGAAATTAA TCTTTATCGAAAAAGGAGCATTGCCTTCTCTTAAAAGGCTCTGGTTATGGTATATATCTAAACTCAAGATTCTACTACCC CCTGGTATCCATCGCTTAGAGACAATTGTAGTGGTCAACATTCAAAATTCATCAGTTGAATTCATTCACCAAAACTTGAT GGACATTGAACAACATCCAACTTCAAGGGAAAAGAACCAGGTGTTGGGCTAA
Protein sequence (LotjaGi6g1v0150900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLMDDPLKSLQNMPKLSSLTLYDCYKGQSLHFEGGGFQKLEELHLEGLYNLKLIFIEKGALPSLKRLWLWYISKLKILLP PGIHRLETIVVVNIQNSSVEFIHQNLMDIEQHPTSREKNQVLG
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 2 | 115 | 114 | 3.0E-13 | ||
| SUPERFAMILY | 3 | 98 | 96 | 1.02E-9 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi6g1v0150900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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