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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0153500 |
| Transcript ID | LotjaGi6g1v0153500.2 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Carboxyl methyltransferase; TAIR: AT5G55250.1 IAA carboxylmethyltransferase 1; Swiss-Prot: sp|Q9FLN8|IAMT1_ARATH Indole-3-acetate O-methyltransferase 1; TrEMBL-Plants: tr|A0A1J7G583|A0A1J7G583_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0153500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:43152885..43155290) extracted from Lotus japonicus Gifu genome v1.2.
TATATGGCTCACGTGGGAGACAATGTTGTAGCGTCCAACATGGAGCTAGAGAGGTTGCTTAGCATGAAAGGAGGTAAAGG AGAGGCTAGCTATGCCAACAATTCCCAAGCACAGGTACCTCTCTCAGTCTCTTGTTTTTCTTTTTTGAACATTCAGTCTC TTGTTTGATTAACTTATTTATATATATATATATATAAGTTATATGGGAATGGTTTGAATGAATCACAACCTTTAAATTAG ATGTAATCACAAATGATCAAGATTAAAAATATATAATTGTGATGTGATTTAATTTGATTAATTTATGGGATACACAGGCC ATGCATGCTAAGTCCATGCTTCACCTTCTCAAAGAAGCTCTAGATGGAGTTCAGCTTCATGCCACTGACATCCCATTTGT AGTGGTGGACCTGGGGTGTTCATGTGGCGACAACACCATCAACGTGGTGGATGTGATCATCAAGCACATCATCAAGCGCT ACGAGGCTTTGGGACTCCACCCACCTGAGTTTTCTGCTTTCTTCTCAGACCTACCTAGCAATGATTTCAACACCCTCTTC CAGCTCCTTCCTCCTCTGGCCAACTATGGAGTTAGCATGGAAGAGTGCCTTGCTGCCAACAACCACCGCTCCTACTTTGC TGCTGGAGTCCCGGGCTCTTTCTACCGGAGGCTTTTTCCGGCGAAATCCGTTCACATTTTCCACTCAGCTTTTTCTTTGC ATTGGTTATCTCAGGTAATCACATATTAATTGTTAATATCGTTTCTGTCATTTTTTGTTTGTTTTTGTGGTATTTTTTAT ATATTTGAAAACAAATTAATTATTTAAGGAAAAAGTATTTTTCATTCTTGTTTTTGTTGTGATGTTATGTTTTAATTTTA AGAAAAGAAAAGAAAAGAAAAAGGTAATATTAATCTTTTATTTTTATTTCTAAAGCTAAAATCTTAAATTAAATGATTCA CCAATTTTTTTAAGAAACTAATCCCTTTTTGAGATAAATTTTTATGCACTAACGATGTAAAAAGTCTTACATAGTCATTC AATCACAACCTTCCATGTTCTATTTTAAATATTATTAAATTCAAAATTAATTATGAGTTACCAAAATGAAGGGATGTGAT TGAATGATCGTGTAAAACTTATTTACACTTTCATTGCGTAGAAATTAAATTTTTTTGAATGTCTAATAAAACAACAAGAA TTGCATGATTAAAAATGAAGAGGAAAGAAAAAGTATGATATTTTTCTAGAGTGCTCATGATATTTTTAACTCAACCATAT CCCCTGAATTGCATGATTAAAACTGAAGAGGAAAAAAAATCTGTCTTCATTTTAAACTTTACCATATGTGATATTTAGGG GTCTAAGAAAGGTGGTATGAGTAAATTACTTTTATTCTTGACAACTTTTGTTTAACGATGATTGCATTTCCTTAAACTTC TAAGCATTTTCTCACTTTTAGACTAAGATCTCATTCACACACCTACCCCACCCATGAAAGAATCTATGTTGTCTCTGTGC AGTAATTTCTATGACAAAATAAAAGAAATATTTGCCTTTTCATATTAATTATAAAATTACCCTACCTAAGTACTAAATTA TGATCAAGAGTTGATGCAACAAATTCTTGCTCTCTAGAGTTGGGGAAAAAAAACCATATCAGAGTGACCTATTTAAATTT GTACTATTGTTCAATGTATGGATTCAAGATAATAAGCACTCAATGCTCTTCCACACATTCTGCATGCATTTCGATATTAG TTGAGTCACTTGAGTGTAATAAGAATGCACTCTTAATCTATAAAAGTGTTATCAGTTAAGTAAAATATGAATAAAATGAG TTCAGTTCATTTTTATTTTTAAGGATGTTTGAACATTCACCATTCAATTCATTTGCACTAATACAAAAAGATAAGATAAT CAAACATAGCTTTTACTTTGTTTTGGGACACTGCAGTTACCAGAATCTGTTGTGGACAAGAGGTCAAGAGCATACAACAA GGGCAGGGTGTTTATCCATGGTGCTAGTGAGATGACAGCAAATGCCTACAAGAAACAATTCCAGACAGACTTGGCAGGCT TCCTGAGCTCAAGATCAGTGGAGATGAAGAGAGGGGGGTCCATGTTCTTGGTTTGCCTAGGAAGAACTTCTGTGGACCCC ACAGACCAGGGTGGGGCTGGCCTTCTCTTTGGGACCCACTTTCAGGATGCTTGGGATGATCTTGTCCAGGAGGTACTTAT CATTTCACAAACATTTTTATGCCTGCTTGTGTCTCAAACAGTACAAACCACAAACCACTGTCTGAATATTTGTCACTGGC AGACAAAAAGGACTTTCACAATACAGTAGAAAGATAGAAAAAGAACATAACTAATCAATGGTTGTAGCATGTAGGTGTCA CATTGA
CDS sequence (LotjaGi6g1v0153500.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTCACGTGGGAGACAATGTTGTAGCGTCCAACATGGAGCTAGAGAGGTTGCTTAGCATGAAAGGAGGTAAAGGAGA GGCTAGCTATGCCAACAATTCCCAAGCACAGGCCATGCATGCTAAGTCCATGCTTCACCTTCTCAAAGAAGCTCTAGATG GAGTTCAGCTTCATGCCACTGACATCCCATTTGTAGTGGTGGACCTGGGGTGTTCATGTGGCGACAACACCATCAACGTG GTGGATGTGATCATCAAGCACATCATCAAGCGCTACGAGGCTTTGGGACTCCACCCACCTGAGTTTTCTGCTTTCTTCTC AGACCTACCTAGCAATGATTTCAACACCCTCTTCCAGCTCCTTCCTCCTCTGGCCAACTATGGAGTTAGCATGGAAGAGT GCCTTGCTGCCAACAACCACCGCTCCTACTTTGCTGCTGGAGTCCCGGGCTCTTTCTACCGGAGGCTTTTTCCGGCGAAA TCCGTTCACATTTTCCACTCAGCTTTTTCTTTGCATTGGTTATCTCAGTTACCAGAATCTGTTGTGGACAAGAGGTCAAG AGCATACAACAAGGGCAGGGTGTTTATCCATGGTGCTAGTGAGATGACAGCAAATGCCTACAAGAAACAATTCCAGACAG ACTTGGCAGGCTTCCTGAGCTCAAGATCAGTGGAGATGAAGAGAGGGGGGTCCATGTTCTTGGTTTGCCTAGGAAGAACT TCTGTGGACCCCACAGACCAGGGTGGGGCTGGCCTTCTCTTTGGGACCCACTTTCAGGATGCTTGGGATGATCTTGTCCA GGAGGTGTCACATTGA
Protein sequence (LotjaGi6g1v0153500.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAHVGDNVVASNMELERLLSMKGGKGEASYANNSQAQAMHAKSMLHLLKEALDGVQLHATDIPFVVVDLGCSCGDNTINV VDVIIKHIIKRYEALGLHPPEFSAFFSDLPSNDFNTLFQLLPPLANYGVSMEECLAANNHRSYFAAGVPGSFYRRLFPAK SVHIFHSAFSLHWLSQLPESVVDKRSRAYNKGRVFIHGASEMTANAYKKQFQTDLAGFLSSRSVEMKRGGSMFLVCLGRT SVDPTDQGGAGLLFGTHFQDAWDDLVQEVSH
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 8 | 268 | 261 | 5.3E-144 | – | |
| PANTHER | 8 | 268 | 261 | 5.3E-144 | ||
| SUPERFAMILY | 13 | 268 | 256 | 6.04E-78 | ||
| Gene3D | 38 | 267 | 230 | 1.4E-84 | – | |
| Pfam | 63 | 268 | 206 | 5.0E-74 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Methyltransferase activity | Catalysis of the transfer of a methyl group to an acceptor molecule. |
Expression pattern of LotjaGi6g1v0153500.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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