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LotjaGi6g1v0153500.4

Overview

Field Value
Gene ID LotjaGi6g1v0153500
Transcript ID LotjaGi6g1v0153500.4
Related isoforms 3
Lotus japonicus genome version Gifu v1.2
Description Carboxyl methyltransferase; TAIR: AT5G55250.1 IAA carboxylmethyltransferase 1; Swiss-Prot: sp|Q9FLN8|IAMT1_ARATH Indole-3-acetate O-methyltransferase 1; TrEMBL-Plants: tr|I1N0J0|I1N0J0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0153500
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr6:43152888..43156695) extracted from Lotus japonicus Gifu genome v1.2.

ATGGCTCACGTGGGAGACAATGTTGTAGCGTCCAACATGGAGCTAGAGAGGTTGCTTAGCATGAAAGGAGGTAAAGGAGA GGCTAGCTATGCCAACAATTCCCAAGCACAGGTACCTCTCTCAGTCTCTTGTTTTTCTTTTTTGAACATTCAGTCTCTTG TTTGATTAACTTATTTATATATATATATATATAAGTTATATGGGAATGGTTTGAATGAATCACAACCTTTAAATTAGATG TAATCACAAATGATCAAGATTAAAAATATATAATTGTGATGTGATTTAATTTGATTAATTTATGGGATACACAGGCCATG CATGCTAAGTCCATGCTTCACCTTCTCAAAGAAGCTCTAGATGGAGTTCAGCTTCATGCCACTGACATCCCATTTGTAGT GGTGGACCTGGGGTGTTCATGTGGCGACAACACCATCAACGTGGTGGATGTGATCATCAAGCACATCATCAAGCGCTACG AGGCTTTGGGACTCCACCCACCTGAGTTTTCTGCTTTCTTCTCAGACCTACCTAGCAATGATTTCAACACCCTCTTCCAG CTCCTTCCTCCTCTGGCCAACTATGGAGTTAGCATGGAAGAGTGCCTTGCTGCCAACAACCACCGCTCCTACTTTGCTGC TGGAGTCCCGGGCTCTTTCTACCGGAGGCTTTTTCCGGCGAAATCCGTTCACATTTTCCACTCAGCTTTTTCTTTGCATT GGTTATCTCAGGTAATCACATATTAATTGTTAATATCGTTTCTGTCATTTTTTGTTTGTTTTTGTGGTATTTTTTATATA TTTGAAAACAAATTAATTATTTAAGGAAAAAGTATTTTTCATTCTTGTTTTTGTTGTGATGTTATGTTTTAATTTTAAGA AAAGAAAAGAAAAGAAAAAGGTAATATTAATCTTTTATTTTTATTTCTAAAGCTAAAATCTTAAATTAAATGATTCACCA ATTTTTTTAAGAAACTAATCCCTTTTTGAGATAAATTTTTATGCACTAACGATGTAAAAAGTCTTACATAGTCATTCAAT CACAACCTTCCATGTTCTATTTTAAATATTATTAAATTCAAAATTAATTATGAGTTACCAAAATGAAGGGATGTGATTGA ATGATCGTGTAAAACTTATTTACACTTTCATTGCGTAGAAATTAAATTTTTTTGAATGTCTAATAAAACAACAAGAATTG CATGATTAAAAATGAAGAGGAAAGAAAAAGTATGATATTTTTCTAGAGTGCTCATGATATTTTTAACTCAACCATATCCC CTGAATTGCATGATTAAAACTGAAGAGGAAAAAAAATCTGTCTTCATTTTAAACTTTACCATATGTGATATTTAGGGGTC TAAGAAAGGTGGTATGAGTAAATTACTTTTATTCTTGACAACTTTTGTTTAACGATGATTGCATTTCCTTAAACTTCTAA GCATTTTCTCACTTTTAGACTAAGATCTCATTCACACACCTACCCCACCCATGAAAGAATCTATGTTGTCTCTGTGCAGT AATTTCTATGACAAAATAAAAGAAATATTTGCCTTTTCATATTAATTATAAAATTACCCTACCTAAGTACTAAATTATGA TCAAGAGTTGATGCAACAAATTCTTGCTCTCTAGAGTTGGGGAAAAAAAACCATATCAGAGTGACCTATTTAAATTTGTA CTATTGTTCAATGTATGGATTCAAGATAATAAGCACTCAATGCTCTTCCACACATTCTGCATGCATTTCGATATTAGTTG AGTCACTTGAGTGTAATAAGAATGCACTCTTAATCTATAAAAGTGTTATCAGTTAAGTAAAATATGAATAAAATGAGTTC AGTTCATTTTTATTTTTAAGGATGTTTGAACATTCACCATTCAATTCATTTGCACTAATACAAAAAGATAAGATAATCAA ACATAGCTTTTACTTTGTTTTGGGACACTGCAGTTACCAGAATCTGTTGTGGACAAGAGGTCAAGAGCATACAACAAGGG CAGGGTGTTTATCCATGGTGCTAGTGAGATGACAGCAAATGCCTACAAGAAACAATTCCAGACAGACTTGGCAGGCTTCC TGAGCTCAAGATCAGTGGAGATGAAGAGAGGGGGGTCCATGTTCTTGGTTTGCCTAGGAAGAACTTCTGTGGACCCCACA GACCAGGGTGGGGCTGGCCTTCTCTTTGGGACCCACTTTCAGGATGCTTGGGATGATCTTGTCCAGGAGGTACTTATCAT TTCACAAACATTTTTATGCCTGCTTGTGTCTCAAACAGTACAAACCACAAACCACTGTCTGAATATTTGTCACTGGCAGA CAAAAAGGACTTTCACAATACAGTAGAAAGATAGAAAAAGAACATAACTAATCAATGGTTGTAGCATGTAGGTGTCACAT TGACTAAGAGTATGTTTGTTTTTCTGCCCAATCAATTCAGGTAGAGTATTAATTATGGAGAAAAATATTGATGTTTGAGA GTTATTTTAAATGATTGATTTCAGAGTCAAAATCAATTGTGAGATTTCACAACATTACATAACAAAACTCACTTTTTTAT AAATTTATTTAAATATGAACCACTTCACTTTCAAGTTCAAGTATTTTTTACTATAACTAATTTATCAAAATCAATTGTGA TAAATTTTCACTTCACTTGTCATGATTCAAGCAAGTTGATCCCAGCCGTCTATTGGCCACCCCAAAGTGATCAAGCCATT CACATACCCATCATCATGTTGGCAGAAATAATAATTAACTGCTGCTTGGCACCTGGTCCATGATATGAGCCAATAATTAG GTTTTGGATGTTTAGAACACACAAAATCATCATCATATCTTAAAGCAAGACAAAAAGGATGTTAGCATTCATCTGATTCA TTTTTAGCTAATGATTTGTAGGACAAGGGATCCAAAAGTACTGTCTTTGAATAGAGGCAAAGCATGTATAATATCCTCTA CCATAATGTGCTAGGCATCCAAGACTGTACTTAAGAGAGTACACAATATAATCACACCATCTAATATGACTCAATATTAT TTTGTAGCACAAAGTATGTCTAAAAAGCATGTAAGAATTATGTTGAGTCTTAGATTATTTAAGACTTCAAGGATATGGCT AGCGAGCTACTTATAAATGGCAGGGCAATCTGCACCTCTAATCTAGTTTTTGAGGTAAAGTTAGGCTCAACCCAAATCAT AAAATGGTATAATTTATGTTAGATTCATTGTTAGGTCACCTGTTGACTGACCACCATGTAAACATCGCTCAAGATGTCCA GTTCTGGACGAGAGGGCAGAGGGGGTGTGGCAGGGTATAGAATTATCAATTGTCTACTGTATGCCTGTTCAATTATCTAC TTTAAGCCTGTTCAAAGCATATATAGTGTATCCTTTTATGCATTGACATGTCTTTGTTGGTATATTGGTTAAATCATATG CTTGACCACAGGGATTAATTAGCAATGAAAAAAGAGACAATTTCAACATTCCAGTTTATGCACCAAGCCTGCAAGACTTC AAGGAGGTGGTTGAAGCTAATGGTTCTTTTACCATAAACAAGCTTGAGGTTTTCAAAGGAGGAAGTCCTCTTGTTGTGAA CCAGCCTGATGATGCAAATGAAGTAGGCAGGGCTCTAGCCAACAGCTGCAGGAGTGTGTCTGGGGTCCTTGTTGATGCTC ATATTGGTGACAAGCTTAGTGAGGAGCTTTTTCAGAGAGTGGAGCGCCGAGCCACACACCATGCCAAAGAGTTACTAGAG CAGCTTCAGTTCTTTCACATTGTTGCATCCCTTTCGTTTGCTCTTTGA
Download Genomic Sequence

CDS sequence (LotjaGi6g1v0153500.4) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGCTCACGTGGGAGACAATGTTGTAGCGTCCAACATGGAGCTAGAGAGGTTGCTTAGCATGAAAGGAGGTAAAGGAGA GGCTAGCTATGCCAACAATTCCCAAGCACAGGAAGCTCTAGATGGAGTTCAGCTTCATGCCACTGACATCCCATTTGTAG TGGTGGACCTGGGGTGTTCATGTGGCGACAACACCATCAACGTGGTGGATGTGATCATCAAGCACATCATCAAGCGCTAC GAGGCTTTGGGACTCCACCCACCTGAGTTTTCTGCTTTCTTCTCAGACCTACCTAGCAATGATTTCAACACCCTCTTCCA GCTCCTTCCTCCTCTGGCCAACTATGGAGTTAGCATGGAAGAGTGCCTTGCTGCCAACAACCACCGCTCCTACTTTGCTG CTGGAGTCCCGGGCTCTTTCTACCGGAGGCTTTTTCCGGCGAAATCCGTTCACATTTTCCACTCAGCTTTTTCTTTGCAT TGGTTATCTCAGTTACCAGAATCTGTTGTGGACAAGAGGTCAAGAGCATACAACAAGGGCAGGGTGTTTATCCATGGTGC TAGTGAGATGACAGCAAATGCCTACAAGAAACAATTCCAGACAGACTTGGCAGGCTTCCTGAGCTCAAGATCAGTGGAGA TGAAGAGAGGGGGGTCCATGTTCTTGGTTTGCCTAGGAAGAACTTCTGTGGACCCCACAGACCAGGGTGGGGCTGGCCTT CTCTTTGGGACCCACTTTCAGGATGCTTGGGATGATCTTGTCCAGGAGGAGGTGGTTGAAGCTAATGGTTCTTTTACCAT AAACAAGCTTGAGGTTTTCAAAGGAGGAAGTCCTCTTGTTGTGAACCAGCCTGATGATGCAAATGAAGTAGGCAGGGCTC TAGCCAACAGCTGCAGGAGTGTGTCTGGGGTCCTTGTTGATGCTCATATTGGTGACAAGCTTAGTGAGGAGCTTTTTCAG AGAGTGGAGCGCCGAGCCACACACCATGCCAAAGAGTTACTAGAGCAGCTTCAGTTCTTTCACATTGTTGCATCCCTTTC GTTTGCTCTTTGA
Download CDS Sequence

Protein sequence (LotjaGi6g1v0153500.4) extracted from Lotus japonicus Gifu v1.2 Proteins.

MAHVGDNVVASNMELERLLSMKGGKGEASYANNSQAQEALDGVQLHATDIPFVVVDLGCSCGDNTINVVDVIIKHIIKRY EALGLHPPEFSAFFSDLPSNDFNTLFQLLPPLANYGVSMEECLAANNHRSYFAAGVPGSFYRRLFPAKSVHIFHSAFSLH WLSQLPESVVDKRSRAYNKGRVFIHGASEMTANAYKKQFQTDLAGFLSSRSVEMKRGGSMFLVCLGRTSVDPTDQGGAGL LFGTHFQDAWDDLVQEEVVEANGSFTINKLEVFKGGSPLVVNQPDDANEVGRALANSCRSVSGVLVDAHIGDKLSEELFQ RVERRATHHAKELLEQLQFFHIVASLSFAL
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR31009:SF90
8 257 250 2.2E-173 –
PANTHER
PTHR31009
8 257 250 2.2E-173
IPR005299
SUPERFAMILY
SSF53335
13 347 335 9.63E-91
IPR029063
Pfam
PF03492
51 261 211 1.8E-75
IPR005299
Gene3D
G3DSA:3.40.50.150
52 233 182 1.2E-81 –
Gene3D
G3DSA:1.10.1200.220
234 259 26 1.2E-81 –
PANTHER
PTHR31009
257 348 92 2.2E-173
IPR005299
PANTHER
PTHR31009:SF90
257 348 92 2.2E-173 –
Gene3D
G3DSA:3.40.50.150
260 276 17 3.0E-14 –
Gene3D
G3DSA:1.10.1200.220
277 325 49 3.0E-14 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0008168
Molecular function Methyltransferase activity Catalysis of the transfer of a methyl group to an acceptor molecule.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi6g1v0153500.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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