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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0153900 |
| Transcript ID | LotjaGi6g1v0153900.2 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Microtubule associated protein 65; TAIR: AT5G55230.1 microtubule-associated proteins 65-1; Swiss-Prot: sp|Q9FLP0|MA651_ARATH 65-kDa microtubule-associated protein 1; TrEMBL-Plants: tr|A0A0S3S6Z3|A0A0S3S6Z3_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0153900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:43198996..43202853) extracted from Lotus japonicus Gifu genome v1.2.
ATGGCGGTGACAGATGCTGAGAATCCTCTTCTGGGAGAAAACACCTGTGGTTCTTTGTTGAATAAGCTGCAGGTAACTTT ATCAAGCTTTTCATCTGTGTCAATCGGAAACGTGCATGGTCTACAGAATAGTGAGGTTATCTATATTTGTTTGTAGGAAA TATGGGATGAGGTTGGTGAGAGTGATGCGGAGCGAGACAAGTTGCTTCTTCAGATAGACCAGGAATGCTTGGATGTGTAC AAGAGAAAGGTTGAGGAGGCTGCAAAATCAAGGGCACAGCTACTTCAAGTCTTGTCTGATGCTAAGCTTGAGCTTTCTAG TCTTCTATCAGCTCTTGGTGATAAGAGCTTCGCTGAAATTGTTAGTGACTAATTACATATGTCCATATGTTTGGCTGCAA CCAACAACTGCAAATATAACTTAGTTATGCATTAAAATATTGAACTGGCAAGCTAATTTCCTATACCTATTTTTGGTTCC TTTGCAGCCTGAAAATACTTCTGGAACTATCAAGGAACAGCTTGCAGCTATAGCACCAATACTGGAACAGTTGTGGCAAC AAAAGGAGGAAAGAATAAAGGAGTTTTCAGATGTTCAGTCACAAATCCAAAAAATATGTGGAGAGATAACTGCGGATTTG AACCCTGATCAGACAGGACCATTTGTAGTTGATGAGTCTGACCTGTCACTGAAGAAGTTGGATGAGTATCACTCCCAACT CCAAGAACTTCAAAAGGAAAAGGTAAACCATCAGATAATCTATGTGTGAAAAAAATGGAAACTTTGTTTGTTCCTCTAAT CAACATGTTGAGAGTTTTGTTTCTTGGTTTTTGTCTTGTAGAGTGAGAGGTTGCACAAGGTTCTTGAATTTGTGAGCACG GTGCATGATCTTTGTGCTGTTCTTGGTATGGACTTTTTCAGTATTATGACTGAGGTTCATCCAAGCTTAAATGATTCTAC TGATGTTCATTCCAAAAGCATAAGCAATGGCACCCTAGCTAGGTTGGCTAAGACAGTCTCAACACTCAAAGAAGATAAAA AGCAGAGGTTGTACAAGGTAATGCATTAAAAATACTGTATGTTAGTTCAGTTGTTTTATTTCCTTCATTCGTGCTTTTTG CCTTATACCTTGGCTGCCAGGTGTTATCCTTCAAAGCTAATCTTTTCATTTATGAATTTTTTAATGTTTACATGGAAATA CCATATATTCTAGCTTTGCACCTCAGAAGTAATTATATCACTTGCAAACATGGCATGCTAATTATGCCTAACTTTTCATC TGCTGTGTTACAGTGTGCCTGCAGGCGCACTGTACATGCTTATGTATGTATATATAACTTTTATGACTTTGACCCAAATA TCTACAGCTGCAAGGGTTAGCTTCACAGCTAATTGATCTGTGGAATCTAATGGATACCCCTGAAGAAGAAAGGAGGCTAT TTGACCATGTCACCTGCAATATTTCAGCTTCTGTAGATGAAGTTTCTATTCCTGGGGCACTTGCTCTGGATCTGATTGAG CAGGTACTAATGACCCACTGAAGTTTGAAAAGTTTTGTTCCATAGGTGTTGCCAACTGATTTTTCTTGTCTTTTGTTGTG AAGGCTGAAGTAGAAGTTGAAAGGCTTGATCAGCTGAAAGCCAGCAGGATGAAAGAGATTGCTTTCAAAAAGCAAACCGA ACTTGAAGAAATATTTGCCCATGCTCATATGGAAATAGACCCAGAAGCTGCTCGAGAGAAGATTTTATCACAGATTGATT CTGGAAAATTTGAACCAGCTGAATTACTGGCGGATATGGACAAACAGATAGCAAATGCAAAAGAAGAAGCTTTAAGCCGG AAGGAAATATTGGACAAAGTTGAGAAATGGATGTCAGCATGTGAAGAAGAGAGTTGGCTTGAAGACTATAATCGGGTACT TATAAGTTATAATCTACCATCTTCAATAATCAACCATCTTCAGTCTTTATGCGTGCACCTGTGATTGAAGAGTTGAAATA GTACCATTTTGAATAATGCTAATGAAAGATGTAATCCTTTGAACTGACTTCATTGTGGTAAGAACTTTGGCGATATATCA TGGGCAGTATAATGATAATGATTGATGAGTATCACTATAATGCAGATGAAAAATGAGGATGTTACTTGAATGACACTTTG ATGTTAGTTTATCTGCAAGGATAGAATTTTGATTTTATCTCTTATGTTATACTTTCCCCAGTTTTTGTGATTATTCTTTT ACAACTTTTTACATTCATACTCCTGACATGTGTTGATGGATTTTGGTTTGTCTGGATATAGGAAAGTGTTAAATATCGCA TTGTACTATTCATTTCCATGAGACAAGGGCTGAATATTCTATTATACCATTTCCCCCATGAAATTTAGTATCAATGAAGT TGGTTAAGAGTAATTCAATGGAGAACTATAAAGGCTTTCCTGCTCTGCTTGTTCACATTAAGGCTTTGCTCTGTTGCAAC TATCCTATCTAGTTTCATTCATATTAGGCAACTATCGTATCTATTGTATTAAATTAGTTTATAGCGCACAAGCTTTTAGT CTATGTCATGTCCTACTTGATTAATGGAAATATGTTTTGCCCTGTTGTCATGTGGGAAGTACATGAAATTTAGCTGTACT TTTCTGTCAATTTATCATCCTTATATTGTCTCTTAGGTACATGGAATTTTAATTCCCTCTTATACTATATTGTTAAACAG GATGAAAACAGGTATAATGCAAGTAGAGGTGCACACTTGAACCTCAAACGTGCAGAGAAAGCTCGGATACTGGTCAACAA AATTCCAGGTATTTGTTAAATGAGACTGAACTTGATCCACTATCAGCATAATTCTCTTCATACTAAAAGCAAACAAGAAA GCATCACATCACTAGAGTGAGTAAATAATTTCATTTGCTATAAAAATACTTTTAGTTTTCTGTGTGTGTTTGGATACACT TTCAAGTTTCAACCCACATTGGCACACATGCCAATGCAAAAAAAGGCACATTTTTTCAAAGGAACAAAAGAGTTGGATTG GATGAAAGGACTTTCACATCCAACCCAACTCTAATACAAACATAATAGCACTATATGTTCAAATGATTTGGATGGAATTA CTTGAACTTGCAATCCGAGGTTTGGTGGCACATGCTAGTGCACTATCATGGTTTCTTGGCATGAACGAGCATAGAAAAAT TATGATATTTTGTTTTTGTTGCAAAAAAAAATGCAGCTATGGTTGATACGCTGGTTGCCAAAACTCGAGCTTGGGAAGAA GTACATGGCGTGTCATTTACATATGATGGTGTTCCTCTTCTTGCCATGTTAGATGAATATGCCATACTGAGGCAGGAGCG GGAAGAGGAAAAACGAAGGATGAAGGTAAGTTTCAGTCATGAAATGATTAGGACGACTTATTTTCAGACTTACTTGAGCA CCTTCTAATCAGACTGTTTGCAAAAGTGAACTGTCACCTTGGTCAATTTCTTCTGTTCATTCTTATATTTGTTGAATGCT GTTCTCCTTGAAGAGTTTATATCATAACCGATGCACTTTACATTCTGTAGGACCAGAAAAAGTATTCTGAGCAGCCACAG AACACTGAACAGGAATCTTCCTTGGGTTCAAGACCTAGCCCTGTGCGGCCACTTGGCAACAAGAAGGTACTTGGCCCTCG TCCTACTGGAGGAGCAAACGGTACTCCTAACCGACGACTATCTCTTAATGCTCATCAGAATGGAAGCAGGTCCACCGTGA AAGATGGAAAAAGGGATAATAACACTAGACACTCCATGTCTAAAGAAGATGCTGCTTCCCATGTTTCTGGTACTGAACCA GTCCCAACATCACCTTAG
CDS sequence (LotjaGi6g1v0153900.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGGTGACAGATGCTGAGAATCCTCTTCTGGGAGAAAACACCTGTGGTTCTTTGTTGAATAAGCTGCAGGAAATATG GGATGAGGTTGGTGAGAGTGATGCGGAGCGAGACAAGTTGCTTCTTCAGATAGACCAGGAATGCTTGGATGTGTACAAGA GAAAGGTTGAGGAGGCTGCAAAATCAAGGGCACAGCTACTTCAAGTCTTGTCTGATGCTAAGCTTGAGCTTTCTAGTCTT CTATCAGCTCTTGGTGATAAGAGCTTCGCTGAAATTATATTGAACTGGCAAGCTAATTTCCTATACCTATTTTTGGTTCC TTTGCAGCCTGAAAATACTTCTGGAACTATCAAGGAACAGCTTGCAGCTATAGCACCAATACTGGAACAGTTGTGGCAAC AAAAGGAGGAAAGAATAAAGGAGTTTTCAGATGTTCAGTCACAAATCCAAAAAATATGTGGAGAGATAACTGCGGATTTG AACCCTGATCAGACAGGACCATTTGTAGTTGATGAGTCTGACCTGTCACTGAAGAAGTTGGATGAGTATCACTCCCAACT CCAAGAACTTCAAAAGGAAAAGAGTGAGAGGTTGCACAAGGTTCTTGAATTTGTGAGCACGGTGCATGATCTTTGTGCTG TTCTTGGTATGGACTTTTTCAGTATTATGACTGAGGTTCATCCAAGCTTAAATGATTCTACTGATGTTCATTCCAAAAGC ATAAGCAATGGCACCCTAGCTAGGTTGGCTAAGACAGTCTCAACACTCAAAGAAGATAAAAAGCAGAGGTTGTACAAGCT GCAAGGGTTAGCTTCACAGCTAATTGATCTGTGGAATCTAATGGATACCCCTGAAGAAGAAAGGAGGCTATTTGACCATG TCACCTGCAATATTTCAGCTTCTGTAGATGAAGTTTCTATTCCTGGGGCACTTGCTCTGGATCTGATTGAGCAGGCTGAA GTAGAAGTTGAAAGGCTTGATCAGCTGAAAGCCAGCAGGATGAAAGAGATTGCTTTCAAAAAGCAAACCGAACTTGAAGA AATATTTGCCCATGCTCATATGGAAATAGACCCAGAAGCTGCTCGAGAGAAGATTTTATCACAGATTGATTCTGGAAAAT TTGAACCAGCTGAATTACTGGCGGATATGGACAAACAGATAGCAAATGCAAAAGAAGAAGCTTTAAGCCGGAAGGAAATA TTGGACAAAGTTGAGAAATGGATGTCAGCATGTGAAGAAGAGAGTTGGCTTGAAGACTATAATCGGGATGAAAACAGGTA TAATGCAAGTAGAGGTGCACACTTGAACCTCAAACGTGCAGAGAAAGCTCGGATACTGGTCAACAAAATTCCAGCTATGG TTGATACGCTGGTTGCCAAAACTCGAGCTTGGGAAGAAGTACATGGCGTGTCATTTACATATGATGGTGTTCCTCTTCTT GCCATGTTAGATGAATATGCCATACTGAGGCAGGAGCGGGAAGAGGAAAAACGAAGGATGAAGGACCAGAAAAAGTATTC TGAGCAGCCACAGAACACTGAACAGGAATCTTCCTTGGGTTCAAGACCTAGCCCTGTGCGGCCACTTGGCAACAAGAAGG TACTTGGCCCTCGTCCTACTGGAGGAGCAAACGGTACTCCTAACCGACGACTATCTCTTAATGCTCATCAGAATGGAAGC AGGTCCACCGTGAAAGATGGAAAAAGGGATAATAACACTAGACACTCCATGTCTAAAGAAGATGCTGCTTCCCATGTTTC TGGTACTGAACCAGTCCCAACATCACCTTAG
Protein sequence (LotjaGi6g1v0153900.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAVTDAENPLLGENTCGSLLNKLQEIWDEVGESDAERDKLLLQIDQECLDVYKRKVEEAAKSRAQLLQVLSDAKLELSSL LSALGDKSFAEIILNWQANFLYLFLVPLQPENTSGTIKEQLAAIAPILEQLWQQKEERIKEFSDVQSQIQKICGEITADL NPDQTGPFVVDESDLSLKKLDEYHSQLQELQKEKSERLHKVLEFVSTVHDLCAVLGMDFFSIMTEVHPSLNDSTDVHSKS ISNGTLARLAKTVSTLKEDKKQRLYKLQGLASQLIDLWNLMDTPEEERRLFDHVTCNISASVDEVSIPGALALDLIEQAE VEVERLDQLKASRMKEIAFKKQTELEEIFAHAHMEIDPEAAREKILSQIDSGKFEPAELLADMDKQIANAKEEALSRKEI LDKVEKWMSACEEESWLEDYNRDENRYNASRGAHLNLKRAEKARILVNKIPAMVDTLVAKTRAWEEVHGVSFTYDGVPLL AMLDEYAILRQEREEEKRRMKDQKKYSEQPQNTEQESSLGSRPSPVRPLGNKKVLGPRPTGGANGTPNRRLSLNAHQNGS RSTVKDGKRDNNTRHSMSKEDAASHVSGTEPVPTSP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 596 | 596 | 4.1E-286 | ||
| PANTHER | 1 | 596 | 596 | 4.1E-286 | – | |
| Pfam | 56 | 582 | 527 | 3.7E-85 | – | |
| Coils | 173 | 200 | 28 | - | – | |
| Coils | 316 | 336 | 21 | - | – | |
| Gene3D | 387 | 521 | 135 | 1.6E-28 | – | |
| Coils | 479 | 506 | 28 | - | – | |
| MobiDBLite | 494 | 509 | 16 | - | – | |
| MobiDBLite | 494 | 596 | 103 | - | – | |
| MobiDBLite | 510 | 524 | 15 | - | – | |
| MobiDBLite | 545 | 561 | 17 | - | – | |
| MobiDBLite | 562 | 581 | 20 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Microtubule cytoskeleton organization | A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins. | ||
| Molecular function | Microtubule binding | Interacting selectively and non-covalently with microtubules, filaments composed of tubulin monomers. |
Expression pattern of LotjaGi6g1v0153900.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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