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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0153900 |
| Transcript ID | LotjaGi6g1v0153900.3 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Microtubule associated protein 65; TAIR: AT5G55230.1 microtubule-associated proteins 65-1; Swiss-Prot: sp|Q9FLP0|MA651_ARATH 65-kDa microtubule-associated protein 1; TrEMBL-Plants: tr|A0A0S3S6Z3|A0A0S3S6Z3_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0153900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:43198996..43202876) extracted from Lotus japonicus Gifu genome v1.2.
TTGTGTGAGAAGTGAGAACTTCAATGGCGGTGACAGATGCTGAGAATCCTCTTCTGGGAGAAAACACCTGTGGTTCTTTG TTGAATAAGCTGCAGGTAACTTTATCAAGCTTTTCATCTGTGTCAATCGGAAACGTGCATGGTCTACAGAATAGTGAGGT TATCTATATTTGTTTGTAGGAAATATGGGATGAGGTTGGTGAGAGTGATGCGGAGCGAGACAAGTTGCTTCTTCAGATAG ACCAGGAATGCTTGGATGTGTACAAGAGAAAGGTTGAGGAGGCTGCAAAATCAAGGGCACAGCTACTTCAAGTCTTGTCT GATGCTAAGCTTGAGCTTTCTAGTCTTCTATCAGCTCTTGGTGATAAGAGCTTCGCTGAAATTGTTAGTGACTAATTACA TATGTCCATATGTTTGGCTGCAACCAACAACTGCAAATATAACTTAGTTATGCATTAAAATATTGAACTGGCAAGCTAAT TTCCTATACCTATTTTTGGTTCCTTTGCAGCCTGAAAATACTTCTGGAACTATCAAGGAACAGCTTGCAGCTATAGCACC AATACTGGAACAGTTGTGGCAACAAAAGGAGGAAAGAATAAAGGAGTTTTCAGATGTTCAGTCACAAATCCAAAAAATAT GTGGAGAGATAACTGCGGATTTGAACCCTGATCAGACAGGACCATTTGTAGTTGATGAGTCTGACCTGTCACTGAAGAAG TTGGATGAGTATCACTCCCAACTCCAAGAACTTCAAAAGGAAAAGGTAAACCATCAGATAATCTATGTGTGAAAAAAATG GAAACTTTGTTTGTTCCTCTAATCAACATGTTGAGAGTTTTGTTTCTTGGTTTTTGTCTTGTAGAGTGAGAGGTTGCACA AGGTTCTTGAATTTGTGAGCACGGTGCATGATCTTTGTGCTGTTCTTGGTATGGACTTTTTCAGTATTATGACTGAGGTT CATCCAAGCTTAAATGATTCTACTGATGTTCATTCCAAAAGCATAAGCAATGGCACCCTAGCTAGGTTGGCTAAGACAGT CTCAACACTCAAAGAAGATAAAAAGCAGAGGTTGTACAAGGTAATGCATTAAAAATACTGTATGTTAGTTCAGTTGTTTT ATTTCCTTCATTCGTGCTTTTTGCCTTATACCTTGGCTGCCAGGTGTTATCCTTCAAAGCTAATCTTTTCATTTATGAAT TTTTTAATGTTTACATGGAAATACCATATATTCTAGCTTTGCACCTCAGAAGTAATTATATCACTTGCAAACATGGCATG CTAATTATGCCTAACTTTTCATCTGCTGTGTTACAGTGTGCCTGCAGGCGCACTGTACATGCTTATGTATGTATATATAA CTTTTATGACTTTGACCCAAATATCTACAGCTGCAAGGGTTAGCTTCACAGCTAATTGATCTGTGGAATCTAATGGATAC CCCTGAAGAAGAAAGGAGGCTATTTGACCATGTCACCTGCAATATTTCAGCTTCTGTAGATGAAGTTTCTATTCCTGGGG CACTTGCTCTGGATCTGATTGAGCAGGTACTAATGACCCACTGAAGTTTGAAAAGTTTTGTTCCATAGGTGTTGCCAACT GATTTTTCTTGTCTTTTGTTGTGAAGGCTGAAGTAGAAGTTGAAAGGCTTGATCAGCTGAAAGCCAGCAGGATGAAAGAG ATTGCTTTCAAAAAGCAAACCGAACTTGAAGAAATATTTGCCCATGCTCATATGGAAATAGACCCAGAAGCTGCTCGAGA GAAGATTTTATCACAGATTGATTCTGGAAAATTTGAACCAGCTGAATTACTGGCGGATATGGACAAACAGATAGCAAATG CAAAAGAAGAAGCTTTAAGCCGGAAGGAAATATTGGACAAAGTTGAGAAATGGATGTCAGCATGTGAAGAAGAGAGTTGG CTTGAAGACTATAATCGGGTACTTATAAGTTATAATCTACCATCTTCAATAATCAACCATCTTCAGTCTTTATGCGTGCA CCTGTGATTGAAGAGTTGAAATAGTACCATTTTGAATAATGCTAATGAAAGATGTAATCCTTTGAACTGACTTCATTGTG GTAAGAACTTTGGCGATATATCATGGGCAGTATAATGATAATGATTGATGAGTATCACTATAATGCAGATGAAAAATGAG GATGTTACTTGAATGACACTTTGATGTTAGTTTATCTGCAAGGATAGAATTTTGATTTTATCTCTTATGTTATACTTTCC CCAGTTTTTGTGATTATTCTTTTACAACTTTTTACATTCATACTCCTGACATGTGTTGATGGATTTTGGTTTGTCTGGAT ATAGGAAAGTGTTAAATATCGCATTGTACTATTCATTTCCATGAGACAAGGGCTGAATATTCTATTATACCATTTCCCCC ATGAAATTTAGTATCAATGAAGTTGGTTAAGAGTAATTCAATGGAGAACTATAAAGGCTTTCCTGCTCTGCTTGTTCACA TTAAGGCTTTGCTCTGTTGCAACTATCCTATCTAGTTTCATTCATATTAGGCAACTATCGTATCTATTGTATTAAATTAG TTTATAGCGCACAAGCTTTTAGTCTATGTCATGTCCTACTTGATTAATGGAAATATGTTTTGCCCTGTTGTCATGTGGGA AGTACATGAAATTTAGCTGTACTTTTCTGTCAATTTATCATCCTTATATTGTCTCTTAGGTACATGGAATTTTAATTCCC TCTTATACTATATTGTTAAACAGGATGAAAACAGGTATAATGCAAGTAGAGGTGCACACTTGAACCTCAAACGTGCAGAG AAAGCTCGGATACTGGTCAACAAAATTCCAGGTATTTGTTAAATGAGACTGAACTTGATCCACTATCAGCATAATTCTCT TCATACTAAAAGCAAACAAGAAAGCATCACATCACTAGAGTGAGTAAATAATTTCATTTGCTATAAAAATACTTTTAGTT TTCTGTGTGTGTTTGGATACACTTTCAAGTTTCAACCCACATTGGCACACATGCCAATGCAAAAAAAGGCACATTTTTTC AAAGGAACAAAAGAGTTGGATTGGATGAAAGGACTTTCACATCCAACCCAACTCTAATACAAACATAATAGCACTATATG TTCAAATGATTTGGATGGAATTACTTGAACTTGCAATCCGAGGTTTGGTGGCACATGCTAGTGCACTATCATGGTTTCTT GGCATGAACGAGCATAGAAAAATTATGATATTTTGTTTTTGTTGCAAAAAAAAATGCAGCTATGGTTGATACGCTGGTTG CCAAAACTCGAGCTTGGGAAGAAGTACATGGCGTGTCATTTACATATGATGGTGTTCCTCTTCTTGCCATGTTAGATGAA TATGCCATACTGAGGCAGGAGCGGGAAGAGGAAAAACGAAGGATGAAGGTAAGTTTCAGTCATGAAATGATTAGGACGAC TTATTTTCAGACTTACTTGAGCACCTTCTAATCAGACTGTTTGCAAAAGTGAACTGTCACCTTGGTCAATTTCTTCTGTT CATTCTTATATTTGTTGAATGCTGTTCTCCTTGAAGAGTTTATATCATAACCGATGCACTTTACATTCTGTAGGACCAGA AAAAGTATTCTGAGCAGCCACAGAACACTGAACAGGAATCTTCCTTGGGTTCAAGACCTAGCCCTGTGCGGCCACTTGGC AACAAGAAGGTACTTGGCCCTCGTCCTACTGGAGGAGCAAACGGTACTCCTAACCGACGACTATCTCTTAATGCTCATCA GAATGGAAGCAGGTCCACCGTGAAAGATGGAAAAAGGGATAATAACACTAGACACTCCATGTCTAAAGAAGATGCTGCTT CCCATGTTTCTGGTACTGAACCAGTCCCAACATCACCTTAG
CDS sequence (LotjaGi6g1v0153900.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGGTGACAGATGCTGAGAATCCTCTTCTGGGAGAAAACACCTGTGGTTCTTTGTTGAATAAGCTGCAGGAAATATG GGATGAGGTTGGTGAGAGTGATGCGGAGCGAGACAAGTTGCTTCTTCAGATAGACCAGGAATGCTTGGATGTGTACAAGA GAAAGGTTGAGGAGGCTGCAAAATCAAGGGCACAGCTACTTCAAGTCTTGTCTGATGCTAAGCTTGAGCTTTCTAGTCTT CTATCAGCTCTTGGTGATAAGAGCTTCGCTGAAATTCCTGAAAATACTTCTGGAACTATCAAGGAACAGCTTGCAGCTAT AGCACCAATACTGGAACAGTTGTGGCAACAAAAGGAGGAAAGAATAAAGGAGTTTTCAGATGTTCAGTCACAAATCCAAA AAATATGTGGAGAGATAACTGCGGATTTGAACCCTGATCAGACAGGACCATTTGTAGTTGATGAGTCTGACCTGTCACTG AAGAAGTTGGATGAGTATCACTCCCAACTCCAAGAACTTCAAAAGGAAAAGAGTGAGAGGTTGCACAAGGTTCTTGAATT TGTGAGCACGGTGCATGATCTTTGTGCTGTTCTTGGTATGGACTTTTTCAGTATTATGACTGAGGTTCATCCAAGCTTAA ATGATTCTACTGATGTTCATTCCAAAAGCATAAGCAATGGCACCCTAGCTAGGTTGGCTAAGACAGTCTCAACACTCAAA GAAGATAAAAAGCAGAGGTTGTACAAGCTGCAAGGGTTAGCTTCACAGCTAATTGATCTGTGGAATCTAATGGATACCCC TGAAGAAGAAAGGAGGCTATTTGACCATGTCACCTGCAATATTTCAGCTTCTGTAGATGAAGTTTCTATTCCTGGGGCAC TTGCTCTGGATCTGATTGAGCAGGCTGAAGTAGAAGTTGAAAGGCTTGATCAGCTGAAAGCCAGCAGGATGAAAGAGATT GCTTTCAAAAAGCAAACCGAACTTGAAGAAATATTTGCCCATGCTCATATGGAAATAGACCCAGAAGCTGCTCGAGAGAA GATTTTATCACAGATTGATTCTGGAAAATTTGAACCAGCTGAATTACTGGCGGATATGGACAAACAGATAGCAAATGCAA AAGAAGAAGCTTTAAGCCGGAAGGAAATATTGGACAAAGTTGAGAAATGGATGTCAGCATGTGAAGAAGAGAGTTGGCTT GAAGACTATAATCGGGATGAAAACAGGTATAATGCAAGTAGAGGTGCACACTTGAACCTCAAACGTGCAGAGAAAGCTCG GATACTGGTCAACAAAATTCCAGCTATGGTTGATACGCTGGTTGCCAAAACTCGAGCTTGGGAAGAAGTACATGGCGTGT CATTTACATATGATGGTGTTCCTCTTCTTGCCATGTTAGATGAATATGCCATACTGAGGCAGGAGCGGGAAGAGGAAAAA CGAAGGATGAAGGACCAGAAAAAGTATTCTGAGCAGCCACAGAACACTGAACAGGAATCTTCCTTGGGTTCAAGACCTAG CCCTGTGCGGCCACTTGGCAACAAGAAGGTACTTGGCCCTCGTCCTACTGGAGGAGCAAACGGTACTCCTAACCGACGAC TATCTCTTAATGCTCATCAGAATGGAAGCAGGTCCACCGTGAAAGATGGAAAAAGGGATAATAACACTAGACACTCCATG TCTAAAGAAGATGCTGCTTCCCATGTTTCTGGTACTGAACCAGTCCCAACATCACCTTAG
Protein sequence (LotjaGi6g1v0153900.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAVTDAENPLLGENTCGSLLNKLQEIWDEVGESDAERDKLLLQIDQECLDVYKRKVEEAAKSRAQLLQVLSDAKLELSSL LSALGDKSFAEIPENTSGTIKEQLAAIAPILEQLWQQKEERIKEFSDVQSQIQKICGEITADLNPDQTGPFVVDESDLSL KKLDEYHSQLQELQKEKSERLHKVLEFVSTVHDLCAVLGMDFFSIMTEVHPSLNDSTDVHSKSISNGTLARLAKTVSTLK EDKKQRLYKLQGLASQLIDLWNLMDTPEEERRLFDHVTCNISASVDEVSIPGALALDLIEQAEVEVERLDQLKASRMKEI AFKKQTELEEIFAHAHMEIDPEAAREKILSQIDSGKFEPAELLADMDKQIANAKEEALSRKEILDKVEKWMSACEEESWL EDYNRDENRYNASRGAHLNLKRAEKARILVNKIPAMVDTLVAKTRAWEEVHGVSFTYDGVPLLAMLDEYAILRQEREEEK RRMKDQKKYSEQPQNTEQESSLGSRPSPVRPLGNKKVLGPRPTGGANGTPNRRLSLNAHQNGSRSTVKDGKRDNNTRHSM SKEDAASHVSGTEPVPTSP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 579 | 579 | 1.7E-292 | ||
| PANTHER | 1 | 579 | 579 | 1.7E-292 | – | |
| Pfam | 52 | 565 | 514 | 1.1E-88 | – | |
| Coils | 156 | 183 | 28 | - | – | |
| Coils | 299 | 319 | 21 | - | – | |
| Gene3D | 370 | 504 | 135 | 1.5E-28 | – | |
| Coils | 462 | 489 | 28 | - | – | |
| MobiDBLite | 477 | 579 | 103 | - | – | |
| MobiDBLite | 477 | 492 | 16 | - | – | |
| MobiDBLite | 493 | 507 | 15 | - | – | |
| MobiDBLite | 528 | 544 | 17 | - | – | |
| MobiDBLite | 545 | 564 | 20 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Microtubule cytoskeleton organization | A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins. | ||
| Molecular function | Microtubule binding | Interacting selectively and non-covalently with microtubules, filaments composed of tubulin monomers. |
Expression pattern of LotjaGi6g1v0153900.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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