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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0153900 |
| Transcript ID | LotjaGi6g1v0153900.4 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Microtubule associated protein 65; TAIR: AT5G55230.1 microtubule-associated proteins 65-1; Swiss-Prot: sp|Q9FLP0|MA651_ARATH 65-kDa microtubule-associated protein 1; TrEMBL-Plants: tr|A0A0S3S6Z3|A0A0S3S6Z3_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0153900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:43199264..43202853) extracted from Lotus japonicus Gifu genome v1.2.
ATGGCGGTGACAGATGCTGAGAATCCTCTTCTGGGAGAAAACACCTGTGGTTCTTTGTTGAATAAGCTGCAGGTAACTTT ATCAAGCTTTTCATCTGTGTCAATCGGAAACGTGCATGGTCTACAGAATAGTGAGGTTATCTATATTTGTTTGTAGGAAA TATGGGATGAGGTTGGTGAGAGTGATGCGGAGCGAGACAAGTTGCTTCTTCAGATAGACCAGGAATGCTTGGATGTGTAC AAGAGAAAGGTTGAGGAGGCTGCAAAATCAAGGGCACAGCTACTTCAAGTCTTGTCTGATGCTAAGCTTGAGCTTTCTAG TCTTCTATCAGCTCTTGGTGATAAGAGCTTCGCTGAAATTGTTAGTGACTAATTACATATGTCCATATGTTTGGCTGCAA CCAACAACTGCAAATATAACTTAGTTATGCATTAAAATATTGAACTGGCAAGCTAATTTCCTATACCTATTTTTGGTTCC TTTGCAGCCTGAAAATACTTCTGGAACTATCAAGGAACAGCTTGCAGCTATAGCACCAATACTGGAACAGTTGTGGCAAC AAAAGGAGGAAAGAATAAAGGAGTTTTCAGATGTTCAGTCACAAATCCAAAAAATATGTGGAGAGATAACTGCGGATTTG AACCCTGATCAGACAGGACCATTTGTAGTTGATGAGTCTGACCTGTCACTGAAGAAGTTGGATGAGTATCACTCCCAACT CCAAGAACTTCAAAAGGAAAAGGTAAACCATCAGATAATCTATGTGTGAAAAAAATGGAAACTTTGTTTGTTCCTCTAAT CAACATGTTGAGAGTTTTGTTTCTTGGTTTTTGTCTTGTAGAGTGAGAGGTTGCACAAGGTTCTTGAATTTGTGAGCACG GTGCATGATCTTTGTGCTGTTCTTGGTATGGACTTTTTCAGTATTATGACTGAGGTTCATCCAAGCTTAAATGATTCTAC TGATGTTCATTCCAAAAGCATAAGCAATGGCACCCTAGCTAGGTTGGCTAAGACAGTCTCAACACTCAAAGAAGATAAAA AGCAGAGGTTGTACAAGGTAATGCATTAAAAATACTGTATGTTAGTTCAGTTGTTTTATTTCCTTCATTCGTGCTTTTTG CCTTATACCTTGGCTGCCAGGTGTTATCCTTCAAAGCTAATCTTTTCATTTATGAATTTTTTAATGTTTACATGGAAATA CCATATATTCTAGCTTTGCACCTCAGAAGTAATTATATCACTTGCAAACATGGCATGCTAATTATGCCTAACTTTTCATC TGCTGTGTTACAGTGTGCCTGCAGGCGCACTGTACATGCTTATGTATGTATATATAACTTTTATGACTTTGACCCAAATA TCTACAGCTGCAAGGGTTAGCTTCACAGCTAATTGATCTGTGGAATCTAATGGATACCCCTGAAGAAGAAAGGAGGCTAT TTGACCATGTCACCTGCAATATTTCAGCTTCTGTAGATGAAGTTTCTATTCCTGGGGCACTTGCTCTGGATCTGATTGAG CAGGTACTAATGACCCACTGAAGTTTGAAAAGTTTTGTTCCATAGGTGTTGCCAACTGATTTTTCTTGTCTTTTGTTGTG AAGGCTGAAGTAGAAGTTGAAAGGCTTGATCAGCTGAAAGCCAGCAGGATGAAAGAGATTGCTTTCAAAAAGCAAACCGA ACTTGAAGAAATATTTGCCCATGCTCATATGGAAATAGACCCAGAAGCTGCTCGAGAGAAGATTTTATCACAGATTGATT CTGGAAAATTTGAACCAGCTGAATTACTGGCGGATATGGACAAACAGATAGCAAATGCAAAAGAAGAAGCTTTAAGCCGG AAGGAAATATTGGACAAAGTTGAGAAATGGATGTCAGCATGTGAAGAAGAGAGTTGGCTTGAAGACTATAATCGGGTACT TATAAGTTATAATCTACCATCTTCAATAATCAACCATCTTCAGTCTTTATGCGTGCACCTGTGATTGAAGAGTTGAAATA GTACCATTTTGAATAATGCTAATGAAAGATGTAATCCTTTGAACTGACTTCATTGTGGTAAGAACTTTGGCGATATATCA TGGGCAGTATAATGATAATGATTGATGAGTATCACTATAATGCAGATGAAAAATGAGGATGTTACTTGAATGACACTTTG ATGTTAGTTTATCTGCAAGGATAGAATTTTGATTTTATCTCTTATGTTATACTTTCCCCAGTTTTTGTGATTATTCTTTT ACAACTTTTTACATTCATACTCCTGACATGTGTTGATGGATTTTGGTTTGTCTGGATATAGGAAAGTGTTAAATATCGCA TTGTACTATTCATTTCCATGAGACAAGGGCTGAATATTCTATTATACCATTTCCCCCATGAAATTTAGTATCAATGAAGT TGGTTAAGAGTAATTCAATGGAGAACTATAAAGGCTTTCCTGCTCTGCTTGTTCACATTAAGGCTTTGCTCTGTTGCAAC TATCCTATCTAGTTTCATTCATATTAGGCAACTATCGTATCTATTGTATTAAATTAGTTTATAGCGCACAAGCTTTTAGT CTATGTCATGTCCTACTTGATTAATGGAAATATGTTTTGCCCTGTTGTCATGTGGGAAGTACATGAAATTTAGCTGTACT TTTCTGTCAATTTATCATCCTTATATTGTCTCTTAGGTACATGGAATTTTAATTCCCTCTTATACTATATTGTTAAACAG GATGAAAACAGGTATAATGCAAGTAGAGGTGCACACTTGAACCTCAAACGTGCAGAGAAAGCTCGGATACTGGTCAACAA AATTCCAGGTATTTGTTAAATGAGACTGAACTTGATCCACTATCAGCATAATTCTCTTCATACTAAAAGCAAACAAGAAA GCATCACATCACTAGAGTGAGTAAATAATTTCATTTGCTATAAAAATACTTTTAGTTTTCTGTGTGTGTTTGGATACACT TTCAAGTTTCAACCCACATTGGCACACATGCCAATGCAAAAAAAGGCACATTTTTTCAAAGGAACAAAAGAGTTGGATTG GATGAAAGGACTTTCACATCCAACCCAACTCTAATACAAACATAATAGCACTATATGTTCAAATGATTTGGATGGAATTA CTTGAACTTGCAATCCGAGGTTTGGTGGCACATGCTAGTGCACTATCATGGTTTCTTGGCATGAACGAGCATAGAAAAAT TATGATATTTTGTTTTTGTTGCAAAAAAAAATGCAGCTATGGTTGATACGCTGGTTGCCAAAACTCGAGCTTGGGAAGAA GTACATGGCGTGTCATTTACATATGATGGTGTTCCTCTTCTTGCCATGTTAGATGAATATGCCATACTGAGGCAGGAGCG GGAAGAGGAAAAACGAAGGATGAAGGTAAGTTTCAGTCATGAAATGATTAGGACGACTTATTTTCAGACTTACTTGAGCA CCTTCTAATCAGACTGTTTGCAAAAGTGAACTGTCACCTTGGTCAATTTCTTCTGTTCATTCTTATATTTGTTGAATGCT GTTCTCCTTGAAGAGTTTATATCATAACCGATGCACTTTACATTCTGTAGGACCAGAAAAAGTATTCTGA
CDS sequence (LotjaGi6g1v0153900.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGGTGACAGATGCTGAGAATCCTCTTCTGGGAGAAAACACCTGTGGTTCTTTGTTGAATAAGCTGCAGGAAATATG GGATGAGGTTGGTGAGAGTGATGCGGAGCGAGACAAGTTGCTTCTTCAGATAGACCAGGAATGCTTGGATGTGTACAAGA GAAAGCCTGAAAATACTTCTGGAACTATCAAGGAACAGCTTGCAGCTATAGCACCAATACTGGAACAGTTGTGGCAACAA AAGGAGGAAAGAATAAAGGAGTTTTCAGATGTTCAGTCACAAATCCAAAAAATATGTGGAGAGATAACTGCGGATTTGAA CCCTGATCAGACAGGACCATTTGTAGTTGATGAGTCTGACCTGTCACTGAAGAAGTTGGATGAGTATCACTCCCAACTCC AAGAACTTCAAAAGGAAAAGAGTGAGAGGTTGCACAAGGTTCTTGAATTTGTGAGCACGGTGCATGATCTTTGTGCTGTT CTTGGTATGGACTTTTTCAGTATTATGACTGAGGTTCATCCAAGCTTAAATGATTCTACTGATGTTCATTCCAAAAGCAT AAGCAATGGCACCCTAGCTAGGTTGGCTAAGACAGTCTCAACACTCAAAGAAGATAAAAAGCAGAGGTTGTACAAGCTGC AAGGGTTAGCTTCACAGCTAATTGATCTGTGGAATCTAATGGATACCCCTGAAGAAGAAAGGAGGCTATTTGACCATGTC ACCTGCAATATTTCAGCTTCTGTAGATGAAGTTTCTATTCCTGGGGCACTTGCTCTGGATCTGATTGAGCAGGCTGAAGT AGAAGTTGAAAGGCTTGATCAGCTGAAAGCCAGCAGGATGAAAGAGATTGCTTTCAAAAAGCAAACCGAACTTGAAGAAA TATTTGCCCATGCTCATATGGAAATAGACCCAGAAGCTGCTCGAGAGAAGATTTTATCACAGATTGATTCTGGAAAATTT GAACCAGCTGAATTACTGGCGGATATGGACAAACAGATAGCAAATGCAAAAGAAGAAGCTTTAAGCCGGAAGGAAATATT GGACAAAGTTGAGAAATGGATGTCAGCATGTGAAGAAGAGAGTTGGCTTGAAGACTATAATCGGGATGAAAACAGGTATA ATGCAAGTAGAGGTGCACACTTGAACCTCAAACGTGCAGAGAAAGCTCGGATACTGGTCAACAAAATTCCAGCTATGGTT GATACGCTGGTTGCCAAAACTCGAGCTTGGGAAGAAGTACATGGCGTGTCATTTACATATGATGGTGTTCCTCTTCTTGC CATGTTAGATGAATATGCCATACTGAGGCAGGAGCGGGAAGAGGAAAAACGAAGGATGAAGAGTTTATATCATAACCGAT GCACTTTACATTCTGTAGGACCAGAAAAAGTATTCTGA
Protein sequence (LotjaGi6g1v0153900.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAVTDAENPLLGENTCGSLLNKLQEIWDEVGESDAERDKLLLQIDQECLDVYKRKPENTSGTIKEQLAAIAPILEQLWQQ KEERIKEFSDVQSQIQKICGEITADLNPDQTGPFVVDESDLSLKKLDEYHSQLQELQKEKSERLHKVLEFVSTVHDLCAV LGMDFFSIMTEVHPSLNDSTDVHSKSISNGTLARLAKTVSTLKEDKKQRLYKLQGLASQLIDLWNLMDTPEEERRLFDHV TCNISASVDEVSIPGALALDLIEQAEVEVERLDQLKASRMKEIAFKKQTELEEIFAHAHMEIDPEAAREKILSQIDSGKF EPAELLADMDKQIANAKEEALSRKEILDKVEKWMSACEEESWLEDYNRDENRYNASRGAHLNLKRAEKARILVNKIPAMV DTLVAKTRAWEEVHGVSFTYDGVPLLAMLDEYAILRQEREEEKRRMKSLYHNRCTLHSVGPEKVF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 57 | 57 | 1.7E-242 | – | |
| PANTHER | 1 | 57 | 57 | 1.7E-242 | ||
| Pfam | 24 | 452 | 429 | 1.7E-78 | – | |
| PANTHER | 55 | 448 | 394 | 1.7E-242 | – | |
| PANTHER | 55 | 448 | 394 | 1.7E-242 | ||
| Coils | 119 | 146 | 28 | - | – | |
| Coils | 262 | 282 | 21 | - | – | |
| Gene3D | 333 | 455 | 123 | 1.9E-27 | – | |
| Coils | 425 | 452 | 28 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Microtubule cytoskeleton organization | A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins. | ||
| Molecular function | Microtubule binding | Interacting selectively and non-covalently with microtubules, filaments composed of tubulin monomers. |
Expression pattern of LotjaGi6g1v0153900.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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