Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0156700 |
| Transcript ID | LotjaGi6g1v0156700.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | GDP-L-galactose phosphorylase 1; TAIR: AT4G26850.1 GDP-L-galactose phosphorylase 1; Swiss-Prot: sp|Q8RWE8|GGAP1_ARATH GDP-L-galactose phosphorylase 1; TrEMBL-Plants: tr|A0A072V6W1|A0A072V6W1_MEDTR GDP-L-galactose phosphorylase; Found in the gene: LotjaGi6g1v0156700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:43650526..43652777) extracted from Lotus japonicus Gifu genome v1.2.
TTTTTTTCTGGTTTGCATGATGTGTGATGTGTTTTTGGTTGTGTTGTCTCATTGAATTTTTGGGATACAGGTGCTAGGCT TCCTTTGTATGCCTTCAAAAGGGATGACAATGTTGGAGAGAAGGACATGCCCCTGATTGCATGCAAGGAGCGACCTGTGG CCTTTCTGGACTCACTTGTTCTTGGGGAGGTATGAATGGAACTTTGTTGATAGAGGGTGATTAGCAAAATTTGTTTTTTT TTCCTTGTTCTTTAGTTTTGTCATCATATGGTATGTGTTGATTGAGTTTTAATTTTTGATGGTGTAGTGGGAAGATCGCA TGCAGAGAGGGCTTTTCCGTTATGATGTTACACTCTGTGAAACCAAGGTCTGATTTGTCTCCAATTTATGTTTATTCTAG TTTTTATTTGTGTTTTAGTTTCTGGGGATGCATTGTTGATTGTTGCATGCATGGATGTTGTCAGTGGAGTTGGTTTCATG TGTTTGTGCTTTTTTGGTGTAGGTGATTCCGGGTGAGTATGGTTTCATTGCCCAGCTGAACGAGGGTCGCCACCTGAAGA AGAGACCTACCGAGTTCCGAGTTGACAAGGTCCTCCAGCCCTTTGATGAAACCAAATTCAACTTTACTAAAGTTGGGCAA GAAGAGGTCCTGTTTCAATTTGAGGCTAGCTGTGATGAGGAAGTCCAATTCTATCCAAATGCCCCAATTGATGTTGAGAA TTCTCCTAGTTTTGTTGCCATCAATGTTAGTATCTAATCTTTATTTTAAGATTTATGCATGTTTTTGGATAACGGTGGAC AGTCACGTGATTTGTCCCACTGTAGCTTTCCACTGTGTATTCGAACATGCACTTTGCTCTTGAGTGTTCAGTAGTGTATA TGTCTATCTGATCGATGATGTTTGTTTATGTCTCTCTTAACAGGTCAGTCCTATTGAATATGGGCATGTGTTGCTGATTC CTCGTATTTTCGAGTGTTTGCCTCAAAGGATTGACCATGCGAGCTTCTTGCTTGCACTTCACATGGCAGCTGAAGCAGCA AATCCATATTTTCGATTGGGTTATAACAGCTTGGGTGCATTTGCCACCATTAACCACCTTCACTTTCAGGTACTCAATCC GAACAACTTGAGATTAGATCACCTTATTGGTCATGTTGATCATTGGCTTATTGCATTCCTTATCTAGTGTCACAGCCATA AACAAAATGCTGATTTTGTGATTTTGACCATTTCAGGCATATTATCTGGCTCTGCCTTTCCCCATTGAGAAGGCTCCTAC TAAGAAAATTGCCAAATTGAATGGAGGTGTGCAAGTGTCTAAATTGTTGAACTATCCCGTCAGAGGTCTTGTGTTTGAGG GTGGTCCTATGCTAAATGATTTAGCAGAAACTGTTTCTGAAGCTTGTATCTGCCTTCAGATCAACAACATACCTCACAAT GTGCTTATTTCTGATTGTGGAAGGCGAGTCTTTCTCTTACCACAGGTAAATGGTCTTAAAAATCTGTCTTTGAGAGCGCT TATGTAGGTGTTTAGAGAGCTTGTGAAAAATAGCTGATTATTAGCAGTTTTGAATTTATTGTCTTAAGCTGCGCAGATTG GTTTATGAATAAGCGTGTATACCTAACCTTTTTTGAGTTTATTTCAATAAGCTTATCAAAATATCTTATGAATAATCACT TAATTAAACTAATTACACCGAGACCAGTGTTGTAAATCACGGATTATAGCGGTAAGCCAAAAATAGCGGGTAATAGCGGA GTAGCGGTAAGCCAAAAAAAGCGCTACGTTAAGGTATAACTGTTATTTGACAACACTGACCGAGACACCCTTAATTTGTT TTAAAAATGACATTCATTAGCTGCAAAATAATAATTTTGGTTACTTGTGTCAATGCACAAACAGTGCTATGCAGAGAAAC AAGCTCTTGGAGAAGTGAGTGCTGAGCTTCTTGACACCCAAGTTAACCCTGCTGTGTGGGAAATTAGTGGGCACATGGTG CTGAAGAGGAAGAAGGACTATGACGAGGCATCTGAAGCCAATGCATGGAGGCTTCTAGCTGAGGTCTCCCTCTCTGAAGA GAGGTTTCAAGAAGTCAATGCTCTTATTTTTCAAGCCATTGCATCTGTTGAGATCGATGCTGATGCCGATGCTGCTAGAT CTCAATGTGTAGATGAAGTTGACGCAGTTAGCTCCTCAAGCACTCAGGCAGCTATGGTGGCTGTTTCACAAAAATGCCTT GTTCTTCAGTAA
CDS sequence (LotjaGi6g1v0156700.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCCCCTGATTGCATGCAAGGAGCGACCTGTGGCCTTTCTGGACTCACTTGTTCTTGGGGAGTGGGAAGATCGCATGCA GAGAGGGCTTTTCCGTTATGATGTTACACTCTGTGAAACCAAGGTGATTCCGGGTGAGTATGGTTTCATTGCCCAGCTGA ACGAGGGTCGCCACCTGAAGAAGAGACCTACCGAGTTCCGAGTTGACAAGGTCCTCCAGCCCTTTGATGAAACCAAATTC AACTTTACTAAAGTTGGGCAAGAAGAGGTCCTGTTTCAATTTGAGGCTAGCTGTGATGAGGAAGTCCAATTCTATCCAAA TGCCCCAATTGATGTTGAGAATTCTCCTAGTTTTGTTGCCATCAATGTCAGTCCTATTGAATATGGGCATGTGTTGCTGA TTCCTCGTATTTTCGAGTGTTTGCCTCAAAGGATTGACCATGCGAGCTTCTTGCTTGCACTTCACATGGCAGCTGAAGCA GCAAATCCATATTTTCGATTGGGTTATAACAGCTTGGGTGCATTTGCCACCATTAACCACCTTCACTTTCAGGCATATTA TCTGGCTCTGCCTTTCCCCATTGAGAAGGCTCCTACTAAGAAAATTGCCAAATTGAATGGAGGTGTGCAAGTGTCTAAAT TGTTGAACTATCCCGTCAGAGGTCTTGTGTTTGAGGGTGGTCCTATGCTAAATGATTTAGCAGAAACTGTTTCTGAAGCT TGTATCTGCCTTCAGATCAACAACATACCTCACAATGTGCTTATTTCTGATTGTGGAAGGCGAGTCTTTCTCTTACCACA GTGCTATGCAGAGAAACAAGCTCTTGGAGAAGTGAGTGCTGAGCTTCTTGACACCCAAGTTAACCCTGCTGTGTGGGAAA TTAGTGGGCACATGGTGCTGAAGAGGAAGAAGGACTATGACGAGGCATCTGAAGCCAATGCATGGAGGCTTCTAGCTGAG GTCTCCCTCTCTGAAGAGAGGTTTCAAGAAGTCAATGCTCTTATTTTTCAAGCCATTGCATCTGTTGAGATCGATGCTGA TGCCGATGCTGCTAGATCTCAATGTGTAGATGAAGTTGACGCAGTTAGCTCCTCAAGCACTCAGGCAGCTATGGTGGCTG TTTCACAAAAATGCCTTGTTCTTCAGTAA
Protein sequence (LotjaGi6g1v0156700.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MPLIACKERPVAFLDSLVLGEWEDRMQRGLFRYDVTLCETKVIPGEYGFIAQLNEGRHLKKRPTEFRVDKVLQPFDETKF NFTKVGQEEVLFQFEASCDEEVQFYPNAPIDVENSPSFVAINVSPIEYGHVLLIPRIFECLPQRIDHASFLLALHMAAEA ANPYFRLGYNSLGAFATINHLHFQAYYLALPFPIEKAPTKKIAKLNGGVQVSKLLNYPVRGLVFEGGPMLNDLAETVSEA CICLQINNIPHNVLISDCGRRVFLLPQCYAEKQALGEVSAELLDTQVNPAVWEISGHMVLKRKKDYDEASEANAWRLLAE VSLSEERFQEVNALIFQAIASVEIDADADAARSQCVDEVDAVSSSSTQAAMVAVSQKCLVLQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 382 | 382 | 1.6E-237 | – | |
| PANTHER | 1 | 382 | 382 | 1.6E-237 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | GDP-D-glucose phosphorylase activity | Catalysis of the reaction: GDP-D-glucose + phosphate = D-glucose-1-P + GDP. |
Expression pattern of LotjaGi6g1v0156700.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…