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LotjaGi6g1v0158000.1

Overview

Field Value
Gene ID LotjaGi6g1v0158000
Transcript ID LotjaGi6g1v0158000.1
Related isoforms 1
Lotus japonicus genome version Gifu v1.2
Description Tetraacyldisaccharide 4'-kinase; TAIR: AT3G20480.1 tetraacyldisaccharide 4'-kinase family protein; Swiss-Prot: sp|Q8LEA0|LPXK_ARATH Probable tetraacyldisaccharide 4'-kinase, mitochondrial; TrEMBL-Plants: tr|A0A151SBR8|A0A151SBR8_CAJCA Tetraacyldisaccharide 4'-kinase; Found in the gene: LotjaGi6g1v0158000
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr6:43912151..43917101) extracted from Lotus japonicus Gifu genome v1.2.

AAAAGTCTCTCACATAGTTCGCGCTTGTTAGCTTGAAGAAGACACAAACCGAAACAACAATGGTTAGATGGAGAAACTGA GTAAAGCAGTGAATGACATAGCCTACACTCAGAAATCGAATCTCCGCAACCTATCTCCACTTCACCGCTCTCTCCTCCCT CTCCTTTCCATCGCCTCTTCTCTCTACAAACTCGCCCTCTCACTTCGCCACTCCCTCTACCACCACCACTTCTTCCAAAT CCACCGGTAACCAACCAACTAACTCATTATCATTTTCCTTCTGTCTGTTTGGTTTCTGGGAAAATCAAAACGAAAATGGA AATTAACATTGAGGAATCGGTGTTGTTGTTGAGTTTAGGTTGCCAGTTCCTGTTATTAGCGTCGGGAATTTGACATGGGG AGGCAATGGCAAGACGCCCATGGTCGAATTCATCGCTCTCTGCTTCGCTCGTTCCGGAATTTCACCCCTCCTTCTTTCTA GGGTAAACAAACTATTTTTCTCTCCTTTTTATTTTCCCTGTTTTTTAATAGTTCAACTTTCTAATTAGCATTGCATCTTT CTGAAATGGTTAATTCAGCTGGAGAAATTATTAACTGGGTGTTTGTTTTCTCATGGGGGATTTTTGTTTAATTCAATGAG CAATTTAGCATGCAGGTTGACAAATAGGTAATTGGTTTGGATAAATTGTGAATTCAGTTTATGGTTAATTATTATTATAA GTACATAAGGGTTAGTTTTGATTATTGGCTGATGAGCAAGTGTATGTTTGGAAATGAGCTATGCACATACTCCGGAAAAC GTTTGGGCAAACTCTATAAATGTGAATCCGGAGAGTAAATGTGGTGACGGGACCATGGCTAAAGTGTCATTAATTACTTC CTTGTTAAAACAATGGCCTTTTTGGTGATGACCTAAGTTATGACTGATTTTCTTGGTTTTCCATATGCTCAAAGTTATTG AAGATATTGCACCGTTCGTTCGTGTCAAATTCGAACTGAAGTGCTAATGTCTGTTCACTTCGCATTTCATGTTTTAGTCA CTAAGTTGCCCAGGTTGATTCATGTATCTCTTCTTTTGGCAGGGTTATGGTGGCGGGGATGAAGTCAACATGCTTCGGAG GCGTTTACTTGGGACATCAACTAAGTTTGGTGTTGGTGCGAATCGGGCTGCAGTTGCAAGTCATCTTATTCAAAAACATG GCTACATTGATATTCGTAAGGGTTCATGGTATGAGAAGCAAAAACTTGATTGTAAGGTCCAGAGTTCTCTTGATTCAGAA AAAATCGGGGTTGTAGTTCTTGATGATGCAATGCAGGTAATACAACTCTTCCCCTCACTTTGTTTACCCATTACTTCGTG ATTTTCTACTTAACTTTGCTCCAATTGAGATCTGCTACATTAGTTACATTCATTCTTATTTTGTTGGAGCTGCTGTTTTG CTTCTAGAGACTTATATGCTTGGACTTGGTATAATTTTTCTTTGACATAGCATTTGCTCTAAATCGTATTATTAATATGT AAGGTAGCATTGGAGCTTGTGGCGTGATTTGGATATTGTAATGGTTAACGGATTAACTCTTTGGGGTAACCATCAACTGC TGCCACTTGGACCTTTAAGGGAACCATTGACTGCACTCAGACGAGCCAATGTAGTTGTAATCCATCATGCAGACTTGGTA TGTCAGAATTTTATCCGCATTTCCTTTTTCAAGGAAATAATTTCCAAAAGTTTCTTGGCAAGTTATTCTTTCATTATATT GCATTTGCTCATTTAGGTGGCATGTAGTTTTGCAGATTTATAAAAATATGGCATAGTACTGAAATTCATGCTTTGGAGAT TCTCAGGTTTCTGAGCATACTATCCAGGATATTGAGTCAATGGTCCGAGGAATAAAAAAGTCTGTTCCCATTTTCTTAAC AAAAATGGATCCCACATACTTATTTGAGGTGGGAATTATCAATGCCAAAATACCATTGACGGCTCTTCATGAAGCTACAG TATTATGCATTTCTGCTATTGGTTCTGCAGAATCTTTTGTGAAGAGGATTCAGAAGGTATTCCTCCTTTAAAATATTTCC ATATCTAAATAGAACTTATATTTTATGATGATCATGGAGACCAATTTAAATCGAAAATATTAATTGAAATTTTCATTTTA ACATGTTAAAGCTTTTTGTAAATTTCTTGAACATGAAAGGATTCTACTATGAAGTGAAGCAACTAAACGGTGGATAAATG AAATAGTTATGTTCTGGAGCTGCTTGTCATAACAGTTTAATATATATTGTAGTATTCATAGTTGTCAATCGCGGATTGCA GAGCATCGCGGCCAACCAAAAACCTTGGTTGGTCAGTGGTTGTTTGCTCGAGGCAGAGGCAGAGACGAAGTTGTTTTTCT CATGTAGTGGAGGCAGAGGCACGCCATCTCTGTTTCACATTTAGACTTTTTTTCATGTGGAAATTCCTGAAAGCCCCTAA AAGTAGCCATAAGTCAAGAGCATTTCTCATAAGTCCGGGTGGCCTACCCTGTTGTGTCGAGATTGCATGCAAAATGCGGC GATGGTGAAGTGAGATGTGATGGGACACACCGTCGTAGTGGGTGGGTGCGATGTGACGCACTGTGGGGATCACAGCGACC ACATGCGATTAACAACATAGGTAGTAATACTGTAATATATATTAGTAAAGTATCATCGTCTGTGCAATTGAATTAAAAGA CAGAAAGGGGTGGTGTCCTAGACATTACGATGACCTAAAGTTTACTAATAACTTCAAGTTAAGTCCTGTTTGGAAGAGTT ATTTAAGTTTATCTATAGCAGAAGTGTCTTATACATTCGCACTCATCTTCTCTTCCATCTCCATTTCACCTCCTTTTTCT TCTTATGTCACACTTCTTTTTCCATCACATCACCCTTCATATCTCTTTTTATTTCTTTATCTCTCTACCCGGAGGTGGAG ACGGGTGGTGATTCTGGTGAACAAAACATTAGTGTTAAACAACTGTTTGAGAGAGCTTTTGTAAATAGCTTTTGACCTGC CTATAAGTTGTTTTAAGTTTATTTTCATAAGAAGTCGAGATTAGCTTATGAAGAAGCATTTATGAATAAGCGTTGATGCA TAAGCGCTTATTTCCATAAGCGCCTATGCATAAGCGCTAATTGCTATAAGTGCTTAATTAAGTTGTTTACCCAAACATAT GCCCTTAGATTTGCAACTAAAAAAGTAACATTTTAAACCTTAGATAGAAAAGGTTGCAGAGAGAATGTCATGCCTGAATA GACAAACTCTGGGTACAGCAATTGAATAGACTGCAGGCCATTCTTCAACATGAAAGGATTCTACTATTAAGTAAAACAAC TAAATAGTGGATAAATGAAATAGTTTAGTGCTTGAGCTACTTGTCATAACTGTTTAATAAATGTTGTTGGAACTTATATT CGAAAAGTATCAACGTCTTTGGAATTGAATTGAAAGACAGACAGGGGTAAATGTATCTTGCAGCCTTGCAAGCATTTCAA TGATCTACACCAACTCCTTGTCTGCAATGCTATGTAGCTAATAGTATATATATTTTAAGCGGGTTTTCTCTTCTCTTTGT ATTTCTAACGTGCAGATAACTTGTTGCAGATGGGAGCACTTTATGTTGATCGAATCGATTTCAGTGATCATCACATGTTC CATACCAAGGTACATTTATCTCTCCTGAATTTGGAAAAGATGGTTTATTGACTGTTTATATCATGTTATTTCAAGTAACC ATTTAAACCGTGCATATCTTTTGACACTGCTGTTAAATAAATAATCGTGTGTGAGAAAACTGCCTGAGGATCATTTTGTG TGCTGTTTACTTTAATTATTTGCATATTGATTTATTTTGAATTTTCTCATGCCATTTATTTGCATTGACTAAGATGCTAA TATCATATTTTCAATTAATCCAGGATATTAATATGATCAGAGCCAGACTTGGAGAGCTAGAGGGGAAGTTTGGTTCCAAA CCAATTGTTGTAATAACTGAAAAAGTAAGTAGACATGCTTCTCATATTTTTGTTGCTGTGTATAATTTTGTTGCTGTTGT AATAACTGAAAACCAATTGTGTATAATTTTTGTTTCTGGATTCATGATCCCTTAGTTAAATTCTCGCTTTCGCAGGATTA TGATAGGGACCCAGAGATTCTTCAGCAATTATATCCATTTAAAGTTTTTGTTCTCTGTTCTACATTGAAGGTTTTGCCCT ATAGAGGAAGCACAGAGGATAGTTTTAAGAAATTTCTGCAGGACCAATTAAAATTAGAATTTCCTGCAGAAAATTAATCT TAGGTTGTTGTAAGCTTTTTCAAGCATGCAGTTAATATACCAAATATTGTTGGTTTTTTTTACTAATTATACAAGATACC GTACAAAGTTGAGAAAAGGCAACGCCAATAGATAGCATGTTTGGAAGTCCTCATACCATTGATTCCAAAGGCAAAATCAA TTTTAGAGAAGCTTTTATGAGTAGCTTTTAGGCGACATAATTAATTGAGAAAAAATTAGCTGATCCAAATATGCTTTGAA CCCATGACATCATGTACTTGACGGTTGATAGAACTTTTTTCTTGAGTTAGGTTGTTTTTGTGAATACTCATGTTATTGAG CTTTGCATTGTCGCACGGGTACTTTGAAACTGGCTACGCACCCGCACCGGGTATGCACTGGGTACTGGTACGCCATGGGT ACTTTGAAACCATGGGTTTTTTTTTACAAGCTTTACCATGTGTTTGGCAGAAAGCCTCAATCCTTTGAATTGTTTATTTA TTATTATATGTAAGATATATGAATATTGAAAGATTTGATATGTAATTAATAATATTCTGTACGATAGATTATTTGATATC TTTTTTTTTTCTTCACTGTATATATATTTATATATTTTTTTAATATATATATTAACGTACCTATAACGTAC
Download Genomic Sequence

CDS sequence (LotjaGi6g1v0158000.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGAGAAACTGAGTAAAGCAGTGAATGACATAGCCTACACTCAGAAATCGAATCTCCGCAACCTATCTCCACTTCACCG CTCTCTCCTCCCTCTCCTTTCCATCGCCTCTTCTCTCTACAAACTCGCCCTCTCACTTCGCCACTCCCTCTACCACCACC ACTTCTTCCAAATCCACCGGTTGCCAGTTCCTGTTATTAGCGTCGGGAATTTGACATGGGGAGGCAATGGCAAGACGCCC ATGGTCGAATTCATCGCTCTCTGCTTCGCTCGTTCCGGAATTTCACCCCTCCTTCTTTCTAGGGGTTATGGTGGCGGGGA TGAAGTCAACATGCTTCGGAGGCGTTTACTTGGGACATCAACTAAGTTTGGTGTTGGTGCGAATCGGGCTGCAGTTGCAA GTCATCTTATTCAAAAACATGGCTACATTGATATTCGTAAGGGTTCATGGTATGAGAAGCAAAAACTTGATTGTAAGGTC CAGAGTTCTCTTGATTCAGAAAAAATCGGGGTTGTAGTTCTTGATGATGCAATGCAGCATTGGAGCTTGTGGCGTGATTT GGATATTGTAATGGTTAACGGATTAACTCTTTGGGGTAACCATCAACTGCTGCCACTTGGACCTTTAAGGGAACCATTGA CTGCACTCAGACGAGCCAATGTAGTTGTAATCCATCATGCAGACTTGGTTTCTGAGCATACTATCCAGGATATTGAGTCA ATGGTCCGAGGAATAAAAAAGTCTGTTCCCATTTTCTTAACAAAAATGGATCCCACATACTTATTTGAGGTGGGAATTAT CAATGCCAAAATACCATTGACGGCTCTTCATGAAGCTACAGTATTATGCATTTCTGCTATTGGTTCTGCAGAATCTTTTG TGAAGAGGATTCAGAAGATGGGAGCACTTTATGTTGATCGAATCGATTTCAGTGATCATCACATGTTCCATACCAAGGAT ATTAATATGATCAGAGCCAGACTTGGAGAGCTAGAGGGGAAGTTTGGTTCCAAACCAATTGTTGTAATAACTGAAAAAGA TTATGATAGGGACCCAGAGATTCTTCAGCAATTATATCCATTTAAAGTTTTTGTTCTCTGTTCTACATTGAAGGTTTTGC CCTATAGAGGAAGCACAGAGGATAGTTTTAAGAAATTTCTGCAGGACCAATTAAAATTAGAATTTCCTGCAGAAAATTAA
Download CDS Sequence

Protein sequence (LotjaGi6g1v0158000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MEKLSKAVNDIAYTQKSNLRNLSPLHRSLLPLLSIASSLYKLALSLRHSLYHHHFFQIHRLPVPVISVGNLTWGGNGKTP MVEFIALCFARSGISPLLLSRGYGGGDEVNMLRRRLLGTSTKFGVGANRAAVASHLIQKHGYIDIRKGSWYEKQKLDCKV QSSLDSEKIGVVVLDDAMQHWSLWRDLDIVMVNGLTLWGNHQLLPLGPLREPLTALRRANVVVIHHADLVSEHTIQDIES MVRGIKKSVPIFLTKMDPTYLFEVGIINAKIPLTALHEATVLCISAIGSAESFVKRIQKMGALYVDRIDFSDHHMFHTKD INMIRARLGELEGKFGSKPIVVITEKDYDRDPEILQQLYPFKVFVLCSTLKVLPYRGSTEDSFKKFLQDQLKLEFPAEN
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR42724:SF1
1 393 393 2.3E-164 –
PANTHER
PTHR42724
1 393 393 2.3E-164
IPR003758
Hamap
MF_00409
18 392 375 22.998
IPR003758
Pfam
PF02606
30 391 362 2.0E-72
IPR003758
TIGRFAM
TIGR00682
38 348 311 1.2E-33
IPR003758
CDD
cd03112
219 265 47 0.0083335 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0009029
Molecular function Tetraacyldisaccharide 4'-kinase activity Catalysis of the reaction: 2,3-bis(3-hydroxytetradecanoyl)-D-glucosaminyl-(1->6)-beta-D-2,3-bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate + ATP = ADP + 2 H(+) + lipid IV(a).
Subterm of
GO:0009245
Biological process Lipid A biosynthetic process The chemical reactions and pathways resulting in the formation of lipid A, the glycolipid group of bacterial lipopolysaccharides, consisting of four to six fatty acyl chains linked to two glucosamine residues. Further modifications of the backbone are common.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi6g1v0158000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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