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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0176900 |
| Transcript ID | LotjaGi6g1v0176900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, putative isoform 1; TAIR: AT1G06660.1 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit; Swiss-Prot: sp|F4IDQ5|JASON_ARATH Protein JASON; TrEMBL-Plants: tr|A0A072V681|A0A072V681_MEDTR Uncharacterized protein; Found in the gene: LotjaGi6g1v0176900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:46832489..46837101) extracted from Lotus japonicus Gifu genome v1.2.
TTTAAAACTCACAGCCGACGCCAAGCGAGTGGTTGTGTCGTATCGCAATTCCATTCCCTCCCTCCGTTAGTTCAAATTTC AAATCGACGCCGCACTCGCACCTCACACACTCTGACTCTGTCTCCATTCGAAACCAAAAAAATAAAAAACAACAAAAGAG AGTGAGAGAGAGAGAGAAAAAGAACGTTACCTTTTGTATTGTACCTCACCTGTTACTACCACTGGGTCCTCTTCAATGAT ATGCGTTGCGTTGGTTAGGTTTCATTTTCACCTTTCTCTTCCGATCCTCCTCCTTCATGGGTTGCTTCTTCGCTTGCTTC AGAACTACTGATGACAATCGCAACCGCAACCGTAACCGTAACCGCCACCTTCCCACCACCACCACCGCCGCCGTGCCTTC TCGTTCCAACAACGTAACTAACACCGATCATACTTCTTTCATTCAGCTGATTTTAGGAGAGTTTTACATTTTTTTTAAAT TTTTTTTTATTTGTGATGATGTGAGGGTTTTGATTTGAACAAACCAGGATATTGCGGGTTCTCGAAATCGATTGTCAAGT TTGTTTCTATCAGAAGGTAAATTAAATTCTATCTTCTAATTCATAGTTCTAGTGTTACATTCTCCTACTGTGTCCACTAA TCTTGTGCTTTCAATTTTGAAAAGAGAGGGAAGACAACTCTACGCGGCGCGAGGGCGACGCGAAGAATTTTGATGCCATA GGGCTTGAAGATGAGGTAACATAGCAGCTGCAATTGTTTGTTGTGTGGTTTTTTCTTAGATGTTTAGCTGTTTTTATTAG TTTCTTACATTTTGGACTCTTTCTGTTCTCATGATGGGAAGGGAATATGTTTGATTTTTATAGTGAGAATTATGCTTTGC GATATTTCATATTTGGCTTCGATATGCTGGATAGGTCTAGTAGTTGTGATTGCGATTTTAGTCGAACTTTATGGAGTTTT ATAGATGAAATGAGGACAAATTGAGAGGGCTAGAGAAGTAACTAAGAGCAATTTGCGATGTGTACATTATCTGATATACA TTGTGTTATATAGAACATTCATAAAACAATTGGGAATGGTCAGAATTAGGGCACGAAGCGGGCCTTTTTTATTTTTCAAT TCTGACTGATGGTTACTTAGGTAGGAATCGTTATATTTGACTTTGGATCCTTTGTTGTCGATCGCTTTTGCTACATTGTT TGGAAGTAGCTCTATATGGATAACTCATATTCTCAAAGTATGGAACATGATGGAATCTATAATTTTAAATTGAGGTGAAG TGAGGTTTAAACCGTATTCTCAGTTATGTTTGCATGGATAGGCAGTAACAGCTCTAGCTTTTATAATAATCTGAAATGCT TTGACTTAGTAGTTAGTTCACTAGGTGACAATTGCCACTAAGCAAGCCTTGGCCCTGAATTTTACACTTTTATTTTACCC CAAGATTCGGGCTACTAGATGACTTATAGATGATCTTAACTTACATAACAGCAGCATGTCTGGAAACAGTGGGCACAGAA TACTGCCTTCTATCTGGTGATGGTCTCCTAGTCACAGCATATATTGTTTTTATAAATGCATTAGCTCAGTTGAAGTTTTG GTCATTTTAATTGTAGACAGTGAGATATTTATCAAGTGTTTATAAGCTATGCTGGACGAAAGGAATAACATGTTGGTCAC GCACCCCAAACCTTGCTGCATTCTCGATTCTTGTCACTTTGCTACTATTTGTTTGCACTTTTCCTAATTTAGAGGATAAC TTTTTGATAAAACAAATGAATTTATTTAATGATAAATTAGCAAATATTGTTGTGTATAAGTCTGCTGGCTCATTATTTGG TGCATACTCCATACCCTTGACTACATTTGTCATGAAGTTTGCCTCTAAAAAAAAACATTTGTCATGAAGTTTGCAATTTT CTGGTGGTGGTGAGTGGTGACGATATCATATATTATGTGAGTTCAATGATGGGATGTATTCCTGATATGTCATGTATGAA CCATGTATCTACTATAGTCATATGATTGCTAAAGCATGGCAGTTCAGGCACAAAAACCTTCGTAATTTCAGCAATTAGAT CTTCTAAAATGGCCGATGCCTTGCTGTGGGAAAAAAAAAGTCCTGATATAGTTTTTCCTTAATTTGTTTTTGAAGTTGCA CAAAGTATATTCTGTTTATAATGAGTGATGTTTTTAAGATTTATTTAAAACTTAAAAAAGAAACACCTGTGTAAAAGTCC ACTACTTAGAATTGTTTTCCTATTCACCAAAAAGTATGGCTTGTGAATTGGGTTTGTATATATGATAAGATAAACTCTTT CTACAGGCCAAGTTTCTCAAAGCTTGTGGTACCTTGACAAGGACCCCGGCGGAAATTCGGAAAGCATCTCAGAAACTGAA AGTGTCACCTTCTTGTGGTAAAGATTCCAGTCCTTCAAGGTTTCACTCTTGGCTTCTTGGTTCATCTGCTGAGAAAGTTC AGCTTGATGGAGAATGGGAAAAAAGAATAGATTCTTCAGAACACACACCAAGCAGGTTATTAATCTCTGTATTGATTCTT TTTACTCTGATATTGAATATTAAAGAACATGGAGAAGCAACTTTTAAGTCAATTTCATCGGAGATGGATATTTCGTTCTC TACTCTTTAGCACAATGGGAAGATGACCTTGTTATGAATGGCTGCAGCTTATTACTAGTAAAGAATCCAAAAAATGGTGA AGCTGATTCTCATATTTTTCTCATTTTAGATTTTTTTATTGGCATGTAGTGTGGGACATTCACTGAATTTACACATGTAT TTTTGGTCATCAGTGATACATTCACCGAAGTTATTTATTTATTTTTTCATTTTCAGCTGTATCTCCAATGCACATAATTC TCAATGTGACTCTCTTGAGTCTACAGAAAGAAGTAGGACAGAAAACAATACAGCTTCTGTTTCCCATTGGCCATCAGCCA GCTACACTAAGAAGAGGAACAAGTCGGTACGTTTTGAATGTGATACTGATATATCATCCTGTGACTCGTCTGACATTGGT GGATGGCGTATGAAGAAAACAGAGTCACCAAATCCGACCCCAATGAAGCTATCTGATGACATGCAAACTCCTGGCACTGT TTACCCTGCAACACTAGAAGACTTACCAAATGGTAGAGCTCGAGTTAAGTCCCAGTTTGTGTATCGAGTTGGCAACAACC TATGTGAGGATGTCTCTCGGAGCAAGGTACCTGAGGAAGATGTTTATATCCCTGAGCAAGCTTCGTGGAAGCTGAGTGAA TCAATTGAGCAGTCTCAAAATGCAACTTCTACACCACAAAAAGGGTTGAAGAATGAAAATGAACCGAAGGTGGATGACAG CTTATCTTCTTGGTTGAAGCCTGCATCTGTCATTCTGGAGGAGAGAAACAAGAGAATGCAGATTGCTGATAATCAGATCC GCAAAACCCCTGCTGACAGGCCCATCATTGGGATGGTTGCTGCACACTGGAGTGAAGATGAAGATTCTCAAGTTCCTCCT CCTAAATGGTGGGATGGCAATGGCATTCCCAATTCAACTAATAAGTACAAGGAGGTATGACCTGTAATCATTGTTTGCAA TGTTAAACAGTTATAAATTTATATATTGCACCTAATTAGTGTTTGATTGTTTTCAGGATCAAAAAGTGAGCTGGCATGCA ACACCATTTGAAGAGAGATTAGAGAAGGCATTATCTGAGGAGAGCTTCATCCCTCAAAGGTATGCCTATCTAAGCATTGA TTTTAACATGAACTCTATTGTCCTGTAAAAATGCAAGTGAGATTACAATGCTGGTGTTTGTGCTGCAGTTTTTAGCTCAT ATTTTACACTGAAATACTGAATGATATACAGTCTGTTTCTATGTATCATTCAGTTACTGGGTTTAGCATGAGGTTATTAG GATGCAATTTTTTTACTACCTATCATGGAATGCCCATATGCTTAAGGAATATATCCTTTTCACCATTTAGTCATTTACAA AGTAGATCGCTTTTAGTTTATAATTAGTTGGTTGATTATAACGTCATTTCAATTCATTATTTAATTCACAGGAAGGACGT ATTGGGAAACCCAATTGCTTTTGATGAGAATGAAGAGAGTGATACTGCATTATCTCAGCTGCAACCTTCAACTCATCCAC AGTCTGTGGTGTCATTCTGATATCTGTAGTTGTTGATCTCACCGTGCTCTCTGGTGTAACAGATATTTGGCATTTATGGA AACTAAGTCTGAATATTCGCTCAACATGCTGATTGATTGGAACCAGCAGTTGATTGTTCAATTTTTGTGATAATATAGAG CTATCAGGCCAGCTTGCATTGTACATAATTGATGAGAATTATTGGGTAACATAATTGGTATTGAGGATTTGGTAGTGATT GGTTTTCATTCGTTAAAAAATTTAATTTATCGATGTCTGAGAATTAAATGGGCTTAAAGTATAAACTATGATGTTGTTAA TCTTAATGATAAGTGCTAAAAATAGACTTGATGTGTCAAATTGTTTGTCTATTAGATGTATGAAAAGAAACAGTGAGAAG GATAACCTAACAACACAATTTTTTTTTATGAATGAACAATACAAAATTAACGG
CDS sequence (LotjaGi6g1v0176900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGTTGCTTCTTCGCTTGCTTCAGAACTACTGATGACAATCGCAACCGCAACCGTAACCGTAACCGCCACCTTCCCAC CACCACCACCGCCGCCGTGCCTTCTCGTTCCAACAACGATATTGCGGGTTCTCGAAATCGATTGTCAAGTTTGTTTCTAT CAGAAGAGAGGGAAGACAACTCTACGCGGCGCGAGGGCGACGCGAAGAATTTTGATGCCATAGGGCTTGAAGATGAGGCC AAGTTTCTCAAAGCTTGTGGTACCTTGACAAGGACCCCGGCGGAAATTCGGAAAGCATCTCAGAAACTGAAAGTGTCACC TTCTTGTGGTAAAGATTCCAGTCCTTCAAGGTTTCACTCTTGGCTTCTTGGTTCATCTGCTGAGAAAGTTCAGCTTGATG GAGAATGGGAAAAAAGAATAGATTCTTCAGAACACACACCAAGCAGCTGTATCTCCAATGCACATAATTCTCAATGTGAC TCTCTTGAGTCTACAGAAAGAAGTAGGACAGAAAACAATACAGCTTCTGTTTCCCATTGGCCATCAGCCAGCTACACTAA GAAGAGGAACAAGTCGGTACGTTTTGAATGTGATACTGATATATCATCCTGTGACTCGTCTGACATTGGTGGATGGCGTA TGAAGAAAACAGAGTCACCAAATCCGACCCCAATGAAGCTATCTGATGACATGCAAACTCCTGGCACTGTTTACCCTGCA ACACTAGAAGACTTACCAAATGGTAGAGCTCGAGTTAAGTCCCAGTTTGTGTATCGAGTTGGCAACAACCTATGTGAGGA TGTCTCTCGGAGCAAGGTACCTGAGGAAGATGTTTATATCCCTGAGCAAGCTTCGTGGAAGCTGAGTGAATCAATTGAGC AGTCTCAAAATGCAACTTCTACACCACAAAAAGGGTTGAAGAATGAAAATGAACCGAAGGTGGATGACAGCTTATCTTCT TGGTTGAAGCCTGCATCTGTCATTCTGGAGGAGAGAAACAAGAGAATGCAGATTGCTGATAATCAGATCCGCAAAACCCC TGCTGACAGGCCCATCATTGGGATGGTTGCTGCACACTGGAGTGAAGATGAAGATTCTCAAGTTCCTCCTCCTAAATGGT GGGATGGCAATGGCATTCCCAATTCAACTAATAAGTACAAGGAGGATCAAAAAGTGAGCTGGCATGCAACACCATTTGAA GAGAGATTAGAGAAGGCATTATCTGAGGAGAGCTTCATCCCTCAAAGGAAGGACGTATTGGGAAACCCAATTGCTTTTGA TGAGAATGAAGAGAGTGATACTGCATTATCTCAGCTGCAACCTTCAACTCATCCACAGTCTGTGGTGTCATTCTGA
Protein sequence (LotjaGi6g1v0176900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGCFFACFRTTDDNRNRNRNRNRHLPTTTTAAVPSRSNNDIAGSRNRLSSLFLSEEREDNSTRREGDAKNFDAIGLEDEA KFLKACGTLTRTPAEIRKASQKLKVSPSCGKDSSPSRFHSWLLGSSAEKVQLDGEWEKRIDSSEHTPSSCISNAHNSQCD SLESTERSRTENNTASVSHWPSASYTKKRNKSVRFECDTDISSCDSSDIGGWRMKKTESPNPTPMKLSDDMQTPGTVYPA TLEDLPNGRARVKSQFVYRVGNNLCEDVSRSKVPEEDVYIPEQASWKLSESIEQSQNATSTPQKGLKNENEPKVDDSLSS WLKPASVILEERNKRMQIADNQIRKTPADRPIIGMVAAHWSEDEDSQVPPPKWWDGNGIPNSTNKYKEDQKVSWHATPFE ERLEKALSEESFIPQRKDVLGNPIAFDENEESDTALSQLQPSTHPQSVVSF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 435 | 435 | 1.4E-141 | ||
| PANTHER | 1 | 435 | 435 | 1.4E-141 | – | |
| MobiDBLite | 15 | 44 | 30 | - | – | |
| MobiDBLite | 23 | 44 | 22 | - | – | |
| MobiDBLite | 139 | 183 | 45 | - | – | |
| MobiDBLite | 145 | 161 | 17 | - | – | |
| MobiDBLite | 168 | 183 | 16 | - | – | |
| MobiDBLite | 208 | 232 | 25 | - | – | |
| MobiDBLite | 290 | 318 | 29 | - | – | |
| MobiDBLite | 290 | 307 | 18 | - | – | |
| MobiDBLite | 428 | 451 | 24 | - | – | |
| MobiDBLite | 431 | 451 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Male meiosis II | A cell cycle process comprising the steps by which a cell progresses through male meiosis II, the second meiotic division in the male germline. |
Expression pattern of LotjaGi6g1v0176900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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