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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0180500 |
| Transcript ID | LotjaGi6g1v0180500.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Calcium-dependent lipid-binding domain-containing protein; TAIR: AT5G12300.1 Calcium-dependent lipid-binding (CaLB domain) family protein; Swiss-Prot: sp|P53901|INN1_YEAST Ingression protein 1; TrEMBL-Plants: tr|I3TAA0|I3TAA0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0180500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:47219142..47222830) extracted from Lotus japonicus Gifu genome v1.2.
CATGCCTTATCTTGCAATGCATGCATATGGGATTTTGACAATGATGTGCATCTGTTTTCTCCATTTATTTTCTCTCCTCT CTCCCTCTGAAACTGGCATGTTTTTAACTCTTTGTCGATTTAATATACATGTCTGGCAAAGTAATAGCATCACAATTCAC TTTCAAGATGTTGTAACCCCATGTTTGATTGTATAATACGCATGGTTTCTGTTTTTAGTTAAGTAAACTTTTGTTTGTTT CTTCTTTAAATTAGTATCAAAGAAAATTAGTATTCCTATATCTTTGAATTTTGGTGGATTATCTTTCTGCTTTGAACTTG ATCATTAGCTATGATGATCACTGCACACAGTAATACAATGCCTTTTAGCATCAACATAATTTTCCCCACAATCAATTCTG ACACCTGAAGATACTCACAGAATCTTCTCCTTATAATTGATTTTGACTACAGAATCACTTGTAGAAAAATTTCCAAACAT GCTATTTGTCTTCCATGTTTTAAAGGCTTTGGAGTTCTTCCCAGTCCACTAGTTGTTCATATTGTAACTCTCTTCAGTAA ACTTTATAACACTGTCTCCAACCCCTATTTCCACCTGAATTTGATAAAGGGAAAATGAGAAAAGAGTGATTAGTACCACC TGAATTTATATAGAAGTAATTGAGTGCAAATTGTTTCCACGTTTCTATCATGGAAAGTAGACTAAACAGGTCCAAGTGGG TCCTCCAATACCCTCAGTGAGTGGAGCAAGTGAGTCATTGAAATTGGAAGCTGCATTGTCAAGCAAAGCCAAAACACACT ATCACCCACCCAAGACAAATAGCAACATCAATCAAAGAAAAAAAAAAGTGGCATCCAACCAATCACCCACTTACATCATC ATCAACTTCCTTATCAATTTTCATGCTTCATCCTCATATTTCCACCTACTACCACCACAAGCTCCTTAACCACCAATGCA TTCCATCAAAGCAAACCCACTTCATTGTTCCTCAAGTTTCTGAATTCATAGATTCATCTCACAAATGTCTTCAACCAACA AGGTGAGAAAACTCTGTTCAAGTTCTGATTCATCTTTATATCCTTTCTCCTTTTCCAGCTTTTTACTGATTTGATACCTG CTATTCAAACCAAGATGATCATTGATGAATTTAACACCTATCCCATTCCCAGCTCTTTTTCTGTTAGAGTTTCTTATTCA TGAGACCTTCTAGCAAGTTGCAAAACAAAGTTCCAATTCAAGGGATAACGACAGGTTAGAATGGAATCATTCAATCCAAG TCATCAAACTACCAGCTTCAGGTACAATCCAAACTCAAATAGGATGAACCATGGAGATGATGATGATGCTGAGTTCTCAG GGTTTCTTGATATCTATGTTCATCATGCTAAGAACATTCATAACATATGCATCTATGACAATCAGGATGTGTATGCTAAA TTCTCTCTAACTTACAACCCTGATGAGACTCTTTCCACCAGAATCATCAATGGGGGTGGGAAAAATCCAGTTTTCAATGA AAACTTGAGGGTGAAGATTAACCAGATGGATGCTGTTCTAAAATGTGAGATTTGGATGTTTAGCAGGTCAAGAAATCACT TGGAAGACCAGCTTTTGGGATTTGCTTTGGTCCCAGTTTCTAAAATGGTTGGTAAAGGAAAAGTGACTGAAGATTATAGC CTTTCCTCCACTGATCTTTTCCATTCTCCTGCTGGAACTGTTCAGTTAACTCTGTCTTTGGATACATCTTTTCCAATCAA TTCCACTGTAAATCCCATACCACAATCATCTACTAACTCATCCATATCCTCAGAAGTTGTGTTGCTTGATCGAAAAGTCT TGGAACTCGACCCAATTGAGTATTCTAGAATTGAATTTCCTGATATCAGTGTGGTGAAGGAGAATCAGAAAATGGTTTCT GAGTACTTCAATTTAGGATCTTTCGGATCGCTACCGTTCCTTTGCCTTGGTGCTTCTCCTCAAGTGGATTATGAAATGAC TGTGAATTCTCCAGATGAGAATCATGATTCTATTTCTCCAAATGAGAGCATTCGGAATTCTGGGTTCCCAAGCTCAACTA CTACAAGCATAAGTGATGATATAAACTCAGCTGATTCAGCTGAGAAAAAGAGTAATTTAGGGGGTGGCTCATCAAATTCT TTCAATGTGTCAATCACAGTTGAGGGTAGTAGTCAGAACTCAGGTGCTTGTCCTGATACCCCAACTTCCAAGAAAGAAAG TGAAGCCAGAGAAAACAAGGATTCAAAGTTCTCAAGCAAGGGGAAAGAGATCAATAGTGATAGGAATGTAGTAGATGCTG CGAAATTCGGTCAAGTTTTTTCTGCTCCAATGGGGAACATCAACATGGAGGCTGAACAATCAGCTATGCAGCAGCAAATA GTTGACATGTATATGAGAAGCATGCAGCAATTTACTGAATCTTTGGCAAAAATGAAGCTCCCAATGGACCTTGACAACAA ACCTGAGAGTGAAGATCGCGGTGATGTGATTCAAAATCATAACAACAGCAAATTAGAAATTGATAAGAAGAAAAAGGATG GATCAAGGGTATTTTATGGTAGTCGAGCATTCTTCTAATTATCTCTTGATGCAGCAGCCACATGACAATAGGTTTGTCAA AGCAAAAACATGAGAGTTTAGTTTCTTATAACGCCGGTTATTTATGACAGATTTAAGTTAATCTTGTGTTGTTTAACCTC CCCTTTTGTTGATGGAAACTATCTTCTATTTTAATGCTATGATATGACTATGTTTATGTTTCTGTGTAATGTGATCATGG AAATGCTTTTGTCCATTTCCTAAGCCATTGAAATCAAGGAGCATTTTGAGATGTGTTTGTGGTAAAAAGTAGCAAATTTA ATCTGTGTTCTTAAAATAGAAATATAGTAACTTATTCTGCTGAAGTGAATTGCAAGAAATTGGGGGTTGTTGTGCTCAAT GAATAGATTCATCATTTTTCTCCAAGCATAATTAATGGAGATTTAGAGTGTATGAAAAGCTTTGATAATTTTCTGATATC TGCTTTCTATAATAAGGTTGGCTACTACTAAGCACAAAGTCACTTTGTTGAGGCAAAGCATATTAGACTATTAGTGGTTT TTAAAACCAATTTGGCATGCATGCTAGCTCATCAAATCATCTTTTTCAACCTGTCTTAGTCACTTTTTTGTTTGAGGCTG GTATCACCTTCCTTAAGCCATGTATATAGCTACAAAAATCTTAGCTGCTTTTTTAAAGTTCCACGGGATTCAGTATATGA TTGTTCTCGCATTTGGGTAAACGCTAACGTGATTTCACACATCTCAAGTATCAACGAGAAATCAGAATTTATCATGTTAA ATTTAACGTGGATTGAAGAAGTGGAATTTTGCCATGTCAAATTCAACGGAAATCCAAACACACTCATTTTAACTGCACTA GGAAGGGTTTTATTTTGTAATAATTGATATATCCTTGTTGGAGAAAACCTTGCTGTAACCCTTAACAGATTTGATAATGG CATTTGTTATTAAATGTTTTTTAGCACCTTCTAGAACTAAAAAAAATGTTTTGATGTATTATTTCATCCACACGAGTCTT ATATATGTGGTGTGGTTTTCCTTTGGGACAAAAAGGGTCCCATGTAATGATCAATAGTTGAGAAATCAGAGCCGAAATTT GTATATTAC
CDS sequence (LotjaGi6g1v0180500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAATCATTCAATCCAAGTCATCAAACTACCAGCTTCAGGTACAATCCAAACTCAAATAGGATGAACCATGGAGATGA TGATGATGCTGAGTTCTCAGGGTTTCTTGATATCTATGTTCATCATGCTAAGAACATTCATAACATATGCATCTATGACA ATCAGGATGTGTATGCTAAATTCTCTCTAACTTACAACCCTGATGAGACTCTTTCCACCAGAATCATCAATGGGGGTGGG AAAAATCCAGTTTTCAATGAAAACTTGAGGGTGAAGATTAACCAGATGGATGCTGTTCTAAAATGTGAGATTTGGATGTT TAGCAGGTCAAGAAATCACTTGGAAGACCAGCTTTTGGGATTTGCTTTGGTCCCAGTTTCTAAAATGGTTGGTAAAGGAA AAGTGACTGAAGATTATAGCCTTTCCTCCACTGATCTTTTCCATTCTCCTGCTGGAACTGTTCAGTTAACTCTGTCTTTG GATACATCTTTTCCAATCAATTCCACTGTAAATCCCATACCACAATCATCTACTAACTCATCCATATCCTCAGAAGTTGT GTTGCTTGATCGAAAAGTCTTGGAACTCGACCCAATTGAGTATTCTAGAATTGAATTTCCTGATATCAGTGTGGTGAAGG AGAATCAGAAAATGGTTTCTGAGTACTTCAATTTAGGATCTTTCGGATCGCTACCGTTCCTTTGCCTTGGTGCTTCTCCT CAAGTGGATTATGAAATGACTGTGAATTCTCCAGATGAGAATCATGATTCTATTTCTCCAAATGAGAGCATTCGGAATTC TGGGTTCCCAAGCTCAACTACTACAAGCATAAGTGATGATATAAACTCAGCTGATTCAGCTGAGAAAAAGAGTAATTTAG GGGGTGGCTCATCAAATTCTTTCAATGTGTCAATCACAGTTGAGGGTAGTAGTCAGAACTCAGGTGCTTGTCCTGATACC CCAACTTCCAAGAAAGAAAGTGAAGCCAGAGAAAACAAGGATTCAAAGTTCTCAAGCAAGGGGAAAGAGATCAATAGTGA TAGGAATGTAGTAGATGCTGCGAAATTCGGTCAAGTTTTTTCTGCTCCAATGGGGAACATCAACATGGAGGCTGAACAAT CAGCTATGCAGCAGCAAATAGTTGACATGTATATGAGAAGCATGCAGCAATTTACTGAATCTTTGGCAAAAATGAAGCTC CCAATGGACCTTGACAACAAACCTGAGAGTGAAGATCGCGGTGATGTGATTCAAAATCATAACAACAGCAAATTAGAAAT TGATAAGAAGAAAAAGGATGGATCAAGGGTATTTTATGGTAGTCGAGCATTCTTCTAA
Protein sequence (LotjaGi6g1v0180500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MESFNPSHQTTSFRYNPNSNRMNHGDDDDAEFSGFLDIYVHHAKNIHNICIYDNQDVYAKFSLTYNPDETLSTRIINGGG KNPVFNENLRVKINQMDAVLKCEIWMFSRSRNHLEDQLLGFALVPVSKMVGKGKVTEDYSLSSTDLFHSPAGTVQLTLSL DTSFPINSTVNPIPQSSTNSSISSEVVLLDRKVLELDPIEYSRIEFPDISVVKENQKMVSEYFNLGSFGSLPFLCLGASP QVDYEMTVNSPDENHDSISPNESIRNSGFPSSTTTSISDDINSADSAEKKSNLGGGSSNSFNVSITVEGSSQNSGACPDT PTSKKESEARENKDSKFSSKGKEINSDRNVVDAAKFGQVFSAPMGNINMEAEQSAMQQQIVDMYMRSMQQFTESLAKMKL PMDLDNKPESEDRGDVIQNHNNSKLEIDKKKKDGSRVFYGSRAFF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 445 | 445 | 3.6E-191 | – | |
| MobiDBLite | 1 | 20 | 20 | - | – | |
| PANTHER | 1 | 445 | 445 | 3.6E-191 | – | |
| MobiDBLite | 1 | 26 | 26 | - | – | |
| Gene3D | 31 | 166 | 136 | 1.8E-13 | ||
| SUPERFAMILY | 32 | 160 | 129 | 1.22E-16 | – | |
| SMART | 35 | 138 | 104 | 2.6E-6 | ||
| CDD | 36 | 137 | 102 | 2.29474E-8 | – | |
| Pfam | 36 | 140 | 105 | 2.0E-10 | ||
| MobiDBLite | 246 | 321 | 76 | - | – | |
| MobiDBLite | 246 | 344 | 99 | - | – | |
| MobiDBLite | 323 | 344 | 22 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi6g1v0180500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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