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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0201400 |
| Transcript ID | LotjaGi6g1v0201400.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | QWRF motif protein (DUF566); TAIR: AT4G30710.1 QWRF motif protein (DUF566); Swiss-Prot: sp|Q9SUH5|AUG8_ARATH AUGMIN subunit 8; TrEMBL-Plants: tr|I1JWC1|I1JWC1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0201400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:49877406..49883043) extracted from Lotus japonicus Gifu genome v1.2.
CTGCCGACTGTGAGAGTATCTTTGATGCAACAAAAGAAAAAGTATATACCATGATTGATTAGTGCTATCAATGATGTGGT AGTTCATATTTGTACTGTGTGCAAGTTCAATAGATAGTTTTGGTGATTGTTGATTGAACCCATTGACAGCACACCTGAAC ATGGCACACCCGTGAGAGAAAACAAAAAAGGAGAAACTTCTCTTACCCTGCGCACCTCCTCTCTCTTATCCTGCACCAAC CATTATCTCTCAGTTCAGTCCCCAGTACCCTCCATTTCCAAGGGGACCCCATTCCCCTGCAAAAACTTCATTTTGTGTTG CAGTTACACAATAACCGTCGCCGAATGGTAAATCGCCGTTAAATGCACCACGTTGTGACAGTTTCAGCGAGTTTCTCTCT CCCATCACCACGCCAAATGTTGGTTACCCTTCAACTGTTCTTGTTGCCATGTCCTGATCTGGTTGGTTTTGGGATTCATT TCATGAGAAAAATCAAAACTTGCCCACTTGATTTTATTCGGTGTGATCATCAAATTCGTTGTTCTATAGATCTGAGTCTC TGTAAAGATGTGCGCTTTTTCTCATTTGTGTAACACCCTTTTCCTTTTTCGACATGTTTGATTCATCTTTTGCTTTTGTA TCTGACTTTTAAGGTGTGTTTGCATTTGTGGCAGATTAACTGTACATAAGAGGATCTAGGCCTGCAGCGATACTGACGTG CAAATCTTTCGTCTGACTTGGGTATAGGGGCGAAAGACTAATCAAACCGTGTACCTTTGTGGACAATTTGGTTCATTTCA GGGCACATGATTGTTGCTGCTGAATCTGGTTTTGATTGATTTGATGAGAATTTCTATCAATGTGGTCTAATTGGGATAGG GTGGATGGATGTATGTGAATCACAGCAAGCATCATCACGGAGGCTAAAAGCTGTGGAGACTCCAAGACCACCCTTGGTTC TGGCAGAAAAGAACAATGCAGCCACCGCCACAGCCACCGCCCGGCGTTCTCGGACGAGGGAAGTTACTTCCCGGTACAAG TCACCTACTCCACCCTCCACACCATCTGGCTCTAGGAGATGTCCTTCACCTAATCTCACAAGAACAGCAACGCCTGCAGC ATCCTTACAGTTGTTACCAAAAAGATCACTTTCTGCTGAAAGGAAGAGGCCTTCAACCCCTCCTTCACCGCCGTCACGAC GACTGTCTACACCTGTCAATGATTCAGCTATTGATGGGAGGTTGTCATCTAGGAAGGTAGCAGCTAGCCGTTTGCCGGAA GGGCATAACCTATGGCCTTCCACCATGCGGAGCTTGAGTGTTTCTTTTCAGTCAGATATCATTTCCATACCTGTTAGCAA GAAAGAGAGGCCGGTTACTAGTGCTTCCGATCGTACCTTGCGGCCGGCTTCTAATGTGGCGCATAGGCAGGGTGAGACTC CATCAACCATAAGGAAGGCTACACCAGAGAGAAAGAGGAGTCCTCTTAAAGGGAAGAATGCTTCTGATCAGTCTGAGAAT TCTAAACCAGTTGATAGTTTGCCTTCTCGGTTGATAGATCAGCATCGGTGGCCGAGTAGGATAGGTGGGAAGGTGTCTTC TAGTGCATTAAACAGAAGTGTTGATTTTGGAGATGCTAGAATGTTGAAGACTCCAGCTTCTGGAACTGGTTTTTCTTCAC TGAGAAGATTATCTTTATCAGAAGAAGCAAGTAAACCCTTGCAAAGGGCTTCTAGTGATAGTGTAAGACTGTTATCTCTT GTTGCAAGTGGCAGAACAGGAAGCGAGGTGAAATCAGTTGATGACTGTTCGCTACATGATTTAAGACCTCACAGATCTTC TACACCTCACACAGATAGAGCAGGACTATCGATTGCTGGGGTCAGATCTCAGTCTTTGTCAGCTCCAGGATCACGTCTGC CCTCACCCAGTAGAATCTCAGTGCAATCTACTTCTAGTTCAAGAGGTGTCAGTCCATCTAGGTCAAGGCCATCAACTCCT CCTTCTAGAGGAGGGGTTAGTCCATCTCGGATTAGGCCTACCAGTTCATCCATTCAATCCAACGATTCAGTTTCAGTGCT CAGCTTTATTGCTGATTTTAGAAAAGGAAAAAAGGGTGCAGCCTTCATAGAAGACGCTCACCAATTACGGCTTCTCTACA ACAGATTCATGCAATGGAGGTTTGCAAATGCGAGAGCTGAGGCTGTGCTTTACATCCAAAATGCAATTGTACAGGTATTG CTGAGTATCTTTGACAACCTGTCAAATTCTTTTTCATGTAGTTCTTCGATAATGTATGTGAACGATTACAGATATCAAAT CACTTGGGTAATTGGTTTTTACTAGAACTTGTTTCAATGGTGCAGAAAACTCTATATAACGTATGGATCGCTACTTTGTC CCTCTGGGAGTCTGTTACTAGGAAGAAGATCAATCTTCAGCAGCTGAAGCTCGAGCTAAAACTGAATTCTGTTTTGAATG ATCAAGTAATGTTTCTCATTACTGGAATATATTATTTATATACCAGGTTTTTTTTTATTGTTCTTAGTAAATCACTTCTT ACCCTTTTACTCCTTATAGGATAATTTAACTTGAGATAGCTATTGGTAAACTTATAAGTGATGCAAATATATGTAAAGCA AGAGACTGACCCCATGTATTGAAAAGTTTTCTTTCTTTTAGTTTCTAATTATAGGTTATTCATGTTTTAGTTTATTTAAA GTTATTAATTTCTTTAAAAAAATGCAAGTGCTTATGATTCTGTTCAAGGTTAAAGTTTTTGAAGGGTAACATTTGATAGA GTTCTAGAGGAGGGCAACATTTTGATCTAGATACTGGTATTGTGTGAATTAAGCTTCTAACTTCCCTTGCTATATAAATG TGTGCTGCTTTTTCTTTCCTTCTTCAGCTGTTTTAAATTTTAACTCCTAGTGATACATATTTTAAATGGGGGCCTTTTGC AATGAAAAAAGCAGATGGCCTACCTTGATGAATGGGCTACGCTTGAGACAGATCATGTTGACGCTCTATCCGGTGCTGTG GAAGATTTGGAGGCGAGCACCCTTCGTCTTCCTGTAACTAGAGGAGCAATGGTATGTATAGTGGTCACTGGCCAGCTGTC CTTTTATTTGATAACCGGAGAAGCACCTACTTTATTACTATGTTTTCACTTTTACAGGTAGATATTGAGCATTTGAAGGT TGCTATCTGTCAAGCTGTTGATGTCATGCAAGCAATGGGGTCTGCAATTCGCTCTTTATTCTCACAGGTAAATAGAATTT TTCTACAGAATTTGTATAGTATTTACTACAATCGATGAGGATAAATATAATAAATTAAGGTTATAATGATTTGGACCAAC TCCCTAGCACGTCTTTCCTGTCATTTTGTAAGCCAGTGCATTTGCAATCCAACCTGTTGTCTTCACTGGTTGCATGTTCA TCTTTACCTTTGATATCCAAATTTTAAAATTAATTTTTTGGATTCCTTGGTTAGGGGCCTGCTAGTCTAATTTTTTATAT CTTTGTTAGATCACATAGTCTACTCTTGGTGCTTATATCATGTTATTTTTGTGTCTGTGATAGGTGGAGGGCATGAATGA TTTAATTTCTGGAGTTGCTGTTGTAGCAACAAAGGAAAAATCCATACTTGATGAATGTGAAATGCTACTGGCTTCAGTAG CTGCTTTGCAGGTGAGAGTCATGATATATGATTTAAGAATCAATTATACACGTAAAATATCTCAAGCTTACACTTAAAAG TCATGCTGGATTCAGGAATCACACTAATATACTCTAGAAAGATCACCAGGGTCATATTTTCAATTGTAATTTAACTTAGT GTCAGTACCTTACTATGGTAATGATTGAAATATATTAGTTCCTTTCTGTTTGGTCTGTCTTTCTTTCATGGTGTTAGCTG CGCATTCTAGCAATTGTGAGAATTCAGGTTATGGAGTTTGCTTGTGATCCCTCATTCTTCACAGAAGTAAACATGTCCTA TTTTCAGTTGAAGGACTGATAATCAGCGTATTAGACAAAAAAGTTGTATCTTAAAATGATTTTGTTGCTGAAACTTGAGC ATGTCATTATGTAAATATGCTTCTGAGGGTCAGAATATTTTTGTCCGACGATTGTTGCAAAAAAATTCCTAGGATATAAA TAGAATTTCTGAAATTCATAAAGAACTTATTAAGTGTAAGGTTTACTGGTGTTATTAGACATCGTCATTTATAACTTATT TATTTTTCAAATAAGACTTTGATCAATAATTGGTGGGTTATAAATTTTAGATATTATATATATCCTTGTTTGCACAAATG TTATATGACTTCAACCTAAATGCATGCCCGTCTGTTTAATTAACAGCATACCTTGAGATTATCCAGTCTAAAATGTACTA TAAATGATGCAGATCTGTTCATGTTTAAATAACAGTATACCTTGAGATAATAAAAGAGCTACTTTCTTGATCTTCAGTTA AAATTTCCCACTTATGATGTATTTATGAGGTTTTATGCTTCTTTATTTAGCCAGAGTTGACGAATGAGAATGAAAATGAT CATGCATGGGGCATGGTTTTATTGAATTGGATTTGGTAGCCTGGCTTGAATCTATCTTCTCATTTTTCTGTGGTTATTAT TTTTCATTGTTTCTTATATTATGAAGGGCTTTAACTAGATTACCTTTTTTTTCCTCATTCCCATTTATGGTGCTTGAAAT ATAGTTGATATGCATTTGTCAATTATCTTCCTGTGCACTCCCTTGTTTCTTACATTTTTCTTCAATTGATGCATAGATTG AATGCAATGTTTCATCTGTGTTAGTTTCTAACTAGTTTTGGCAAAAGCAGGTAGAGGAAAGTAGCCTACAGACGCATCTA ATTCAAATCAAGCAAGTTTTGGGGATAATCAACTAGTCAATTTCAACTTAAACACACATGAGCCTGACCTGCTGCCAAGC TAACAAGTGATAACTTTTCTCTCGCGGCTTCAGCCATAGTATCAGTGTCTAATATTTTTCAGGTTCTTTACCATTGTAAA TTTTAGAATAGGTATTTTTCCTGTTAAATATGCTGAAATTGATATTATTTTGTTACCCCATATTTTTTTTTCTTCATTTT CCCTACACTAGAGGCCGGAGGCTTCCACTTGTAATTTGTATCAAGCACAGGAAAAGAAAATGAAAATGAAAAGGAATGGA GCAAAAATTGACACCCATCCAAATTTACTCTCTGCTTTTTTTGTCATATCTACCAACAACATTGTGATTTTATGGCAGAA GTTTCTCAGCATGGGTGAGGTCATTATATGCTAATTCTACTGGCTGTCTTATTGCAAGTGGTCTCAATAATAATATCATT TAGTGTGCTCTATAATCGGCAAGTTAGTCAGCAACAATGTTCCAATCACGAAACCCATGGGAGAACCAAACCACTCATTC TCAAAAATATGATTAACAATTTTGAATATATTGTGTGATTTTAAGAGAGATTCTGCATCATCTACTAAAACACATAACAA AATATTACAATTTTCATAAAGCAATTTGAAAATTAGCAGACATTTATTATATAAAATTTTACGAGTTTAATAACTATACG CCATCAGTTTAAATAAATTCCACACACATTTAAGTAAG
CDS sequence (LotjaGi6g1v0201400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATGTATGTGAATCACAGCAAGCATCATCACGGAGGCTAAAAGCTGTGGAGACTCCAAGACCACCCTTGGTTCTGGC AGAAAAGAACAATGCAGCCACCGCCACAGCCACCGCCCGGCGTTCTCGGACGAGGGAAGTTACTTCCCGGTACAAGTCAC CTACTCCACCCTCCACACCATCTGGCTCTAGGAGATGTCCTTCACCTAATCTCACAAGAACAGCAACGCCTGCAGCATCC TTACAGTTGTTACCAAAAAGATCACTTTCTGCTGAAAGGAAGAGGCCTTCAACCCCTCCTTCACCGCCGTCACGACGACT GTCTACACCTGTCAATGATTCAGCTATTGATGGGAGGTTGTCATCTAGGAAGGTAGCAGCTAGCCGTTTGCCGGAAGGGC ATAACCTATGGCCTTCCACCATGCGGAGCTTGAGTGTTTCTTTTCAGTCAGATATCATTTCCATACCTGTTAGCAAGAAA GAGAGGCCGGTTACTAGTGCTTCCGATCGTACCTTGCGGCCGGCTTCTAATGTGGCGCATAGGCAGGGTGAGACTCCATC AACCATAAGGAAGGCTACACCAGAGAGAAAGAGGAGTCCTCTTAAAGGGAAGAATGCTTCTGATCAGTCTGAGAATTCTA AACCAGTTGATAGTTTGCCTTCTCGGTTGATAGATCAGCATCGGTGGCCGAGTAGGATAGGTGGGAAGGTGTCTTCTAGT GCATTAAACAGAAGTGTTGATTTTGGAGATGCTAGAATGTTGAAGACTCCAGCTTCTGGAACTGGTTTTTCTTCACTGAG AAGATTATCTTTATCAGAAGAAGCAAGTAAACCCTTGCAAAGGGCTTCTAGTGATAGTGTAAGACTGTTATCTCTTGTTG CAAGTGGCAGAACAGGAAGCGAGGTGAAATCAGTTGATGACTGTTCGCTACATGATTTAAGACCTCACAGATCTTCTACA CCTCACACAGATAGAGCAGGACTATCGATTGCTGGGGTCAGATCTCAGTCTTTGTCAGCTCCAGGATCACGTCTGCCCTC ACCCAGTAGAATCTCAGTGCAATCTACTTCTAGTTCAAGAGGTGTCAGTCCATCTAGGTCAAGGCCATCAACTCCTCCTT CTAGAGGAGGGGTTAGTCCATCTCGGATTAGGCCTACCAGTTCATCCATTCAATCCAACGATTCAGTTTCAGTGCTCAGC TTTATTGCTGATTTTAGAAAAGGAAAAAAGGGTGCAGCCTTCATAGAAGACGCTCACCAATTACGGCTTCTCTACAACAG ATTCATGCAATGGAGGTTTGCAAATGCGAGAGCTGAGGCTGTGCTTTACATCCAAAATGCAATTGTACAGAAAACTCTAT ATAACGTATGGATCGCTACTTTGTCCCTCTGGGAGTCTGTTACTAGGAAGAAGATCAATCTTCAGCAGCTGAAGCTCGAG CTAAAACTGAATTCTGTTTTGAATGATCAAATGGCCTACCTTGATGAATGGGCTACGCTTGAGACAGATCATGTTGACGC TCTATCCGGTGCTGTGGAAGATTTGGAGGCGAGCACCCTTCGTCTTCCTGTAACTAGAGGAGCAATGGTAGATATTGAGC ATTTGAAGGTTGCTATCTGTCAAGCTGTTGATGTCATGCAAGCAATGGGGTCTGCAATTCGCTCTTTATTCTCACAGGTG GAGGGCATGAATGATTTAATTTCTGGAGTTGCTGTTGTAGCAACAAAGGAAAAATCCATACTTGATGAATGTGAAATGCT ACTGGCTTCAGTAGCTGCTTTGCAGGTAGAGGAAAGTAGCCTACAGACGCATCTAATTCAAATCAAGCAAGTTTTGGGGA TAATCAACTAG
Protein sequence (LotjaGi6g1v0201400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDVCESQQASSRRLKAVETPRPPLVLAEKNNAATATATARRSRTREVTSRYKSPTPPSTPSGSRRCPSPNLTRTATPAAS LQLLPKRSLSAERKRPSTPPSPPSRRLSTPVNDSAIDGRLSSRKVAASRLPEGHNLWPSTMRSLSVSFQSDIISIPVSKK ERPVTSASDRTLRPASNVAHRQGETPSTIRKATPERKRSPLKGKNASDQSENSKPVDSLPSRLIDQHRWPSRIGGKVSSS ALNRSVDFGDARMLKTPASGTGFSSLRRLSLSEEASKPLQRASSDSVRLLSLVASGRTGSEVKSVDDCSLHDLRPHRSST PHTDRAGLSIAGVRSQSLSAPGSRLPSPSRISVQSTSSSRGVSPSRSRPSTPPSRGGVSPSRIRPTSSSIQSNDSVSVLS FIADFRKGKKGAAFIEDAHQLRLLYNRFMQWRFANARAEAVLYIQNAIVQKTLYNVWIATLSLWESVTRKKINLQQLKLE LKLNSVLNDQMAYLDEWATLETDHVDALSGAVEDLEASTLRLPVTRGAMVDIEHLKVAICQAVDVMQAMGSAIRSLFSQV EGMNDLISGVAVVATKEKSILDECEMLLASVAALQVEESSLQTHLIQIKQVLGIIN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 124 | 124 | - | – | |
| PANTHER | 17 | 610 | 594 | 4.7E-190 | – | |
| PANTHER | 17 | 610 | 594 | 4.7E-190 | – | |
| MobiDBLite | 49 | 83 | 35 | - | – | |
| MobiDBLite | 159 | 237 | 79 | - | – | |
| MobiDBLite | 169 | 189 | 21 | - | – | |
| MobiDBLite | 190 | 204 | 15 | - | – | |
| MobiDBLite | 205 | 219 | 15 | - | – | |
| MobiDBLite | 298 | 390 | 93 | - | – | |
| MobiDBLite | 304 | 321 | 18 | - | – | |
| Pfam | 305 | 582 | 278 | 8.7E-86 | ||
| MobiDBLite | 322 | 390 | 69 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi6g1v0201400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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