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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0206700 |
| Transcript ID | LotjaGi6g1v0206700.2 |
| Related isoforms 5 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Reductase 1; TAIR: AT1G59960.1 NAD(P)-linked oxidoreductase superfamily protein; Swiss-Prot: sp|Q9SQ64|COR2_PAPSO Non-functional NADPH-dependent codeinone reductase 2; TrEMBL-Plants: tr|V4TEP3|V4TEP3_9ROSI Uncharacterized protein; Found in the gene: LotjaGi6g1v0206700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:50403470..50406810) extracted from Lotus japonicus Gifu genome v1.2.
AAAAGATGCTGGTATGATGCACTATAATCCATTTGATACTCACAACCTTACGAGTTACCGTGCGACACCAAAACATGTCT TCATCACTAATCGTTCCAAATGTGGTGCTCTCCAACAACCGAAACTTACCGGTGATTGGATTCGGAACTGCTACCATCTT AGGCTCCGCTCCCGGCGATGACACCACCAAGGTGGCAGTGCTAGATGCCATTAAGCTCGGTTACAGGCACTTTGACACAG CTTCGATTTATGGGTCAGAGGAGGCACTTGGAGAAGCCATAGCTGAAGCATTAAAACTTGGTCTCGTTGGATCTAGAGAT GAACTCTTTGTCACTTCCAAGCTCTGGTGCTCTGATAATCATCCTGATCTTGTTCTTCGTGCTTTGAAGAAAACACTTCA GTAAGGACAACTATTGTCAATTTAAATTATGATCATTAGATATCTTCTCTGAATTTTCCTTTATATATGAACTGAGTATT GTTGTTCTTCAAAATTAGAGCTTTCAATTTGGGTTTCTAACCCACCAGTCATCCCTGTCTAATCCGGCTCGTAAGAAAAA TGATGCAATGCGTTAGTATTATTATTAAATTATGTTGGATTTGAATATTTTGTTTTTACTTTAAACAGTTGATCTGTGCT ATAATATTAATATTTTAGATATTTTTCACCGGACTAAATAAATCATAAGTAGATTTTCATAACATTTTCACTTTTGATTC ATTTCTTCATATTCTAGTTTTTTACACCCAAAAACAATGAGCCAACCCATGATAGGTTGAGTTTAGTTGATCAATTTCTT ACTTATTTAAATACGAGCACGACTAGCTCAATCTGCAATGAGCCAACCCATATGGGTCAGACTGTTTTGTATTGATAACG CTAAAAATTATCTTGTTTGGGTACATGATTTAAAATTTTGTATTTGAATAATTTTCAATAAAGATTGGTTAATTGATTGA TATTTTAAATGATAGATACTTAATGTTTCTTAGGGTGTGTTTGCAAGTTTGATTTTTAAGGAGATGGAAGAGAAATGAGA GACTTATGACAATTTTTCACATTGTTTGACTTTGAAAGTTTTTAAATAAGGGAGTATGAGTTTAAAGAATTGTTGAAAAA CTTCTCCAATACACTCATGCAATTAGTTTGTGGAGTTCCCATAAATTGAGGATTTTGGTGAAATTTTGAGCTTCCAAACA AGGGAAGGACATACGGGTCGGGCTGTCTTGCATTGACAACTCTAAAAATTACTCTGTTTGGGTATAGGATTTAAAATTTT GTATTTGAATAATTTTCACCAAAAATTGATCAATTGAATAATATTTTAAATGATAGATACTTAATTTTTCTTAGGGTGTG ATTGCAAGTTTGATTTTTAAGGAGAGGGAGGAGAAATAAGAGACTTATGGTAAATTTTCACATTGTTTGACTTTGGGAGT TTTTTTAATAAGGAAGAAAGAGTTTAGAGAATTGTTGAAAAACTCCTCCAATACACTCCTTTAATTAGTTTGTGGAGTTC CTCTAAATTTAGGATTTTGGTGGAATTTTGAGCTTCCGAACAAGGGAAGGACATACGCTCCCCCCAACATTCCCTTTAAG TAATATCTATCTAATAAGTCCTGTGTATGAAAAAATCGTAAGTGTAGTTCTATCTAGATGCGTATAATTTCACAATGATA ACTATATTGGAAAAAAAAAACTAATTTAGTTTACTTTAACTCTTTAACTAAACATAACTTTTTTATTTGTTAAAGTACAT ATTTTTGTGGCTAAAGCTAATGCAGGTCATTGAGTTGTTTTATTTTTTGTCAAACAGGTCACTGAAATTAGAATATGTAG ATCTTTATTTGATCCACTGGCCCATTGCTTTGAAGCCTGGAAATTGGGACATGCCTTATGATGAAGAGGCCATGGCCCCA TTTGACTTGAAGGGTGTGTGGACAAAAATGGAGGAATGCCAACAACTGGGGCTTACAAAAGGCATTGGAGTCAGCAACTT CAGTTGCAAAAAACTTGAAAATTTGCTCTCATTTGCCAATATTCCTCCTGCTGTCAACCAAGTACGCTCACAACCTCATA TTGGATATCTCTCTACTTTTCTTTAGTCATGATTAAACTTTCAATTGCTGGATATATGATATTACACCACCAAATCAAAA ACAGATTAGGATGAATCCTACTTGGCAGCAAAAGAAGTTAAAAGACTACTGCCAAGCAAAAGGAATATTCATAACTGCCT ACTCTCCTTTGGGAGCCAAAGGTACCGTTTGGGGTACCAATGATGTTATGGACAATGAATTGCTCAAGGAAATTGCAAAT GCTCATGGAAAATCTTTTGCTCAGGTATCCATTATAACTTTCTTTCACATGAAAAAGTTTAACTTATATTTCGTTTTTTA TAAACTTATACTTTTTAATCTTAATCTAAGTGAGTTTTTATTCCCATTTTGCTCAAAGCAAACATGCTTAGGAACATATA AAATAATAAAATAGAAGAAAAAATTCTAATAATCATATAGAGATATAGTTTAGCAATTTGAATTTGTACGATCATATTTG AGTTAGTGATGACACATAAGAAATTATTAGGTTTTTATTATTGCGGAACCAAACATACTTTTCTAACTTCTCCAAAAAGT GATCATGAGATTTTGCACCGTAAATCAAACACACTACACGTCTACCATTTAGATATTCATAATATTTTTAAACAATGCGA GTTCTACATAGATGATTAACACTACCATGTTATTCTTTGAACCAAAAAACAAACACTACCCTACACATGATATACCTTGT GGACTTGTGATTAATTAATAAAACAAAATTTAAGTATTGGAGTCTATATAAATTATATAAATTAAGTATATCCATTTCTT TTTAAATTATGATTCACGAATGTTTTTGTCACCATATTTAGCTAACATAATACTTTCTGGTGTAATAGGTATGTCTAAGA TGGTTGTATGAGGAAGGCGTAACTATGGCAGTTAAGAGCTACAACAAAGAAAGAATGAAGCAAAATCTGGAAATATTTGA TTGGTCACTTACAAAAGATGACTATGAAAAAATTAATCAAGTCAAGCAGCACCTTTCGTTGAAGTATGGACCAGCAAAGT TCGTTGAGGACCTTTGGGATGAAGAAAATTAATACATGCAATATGGAACCATATACTAAAGCTTTATGACTATGAAGAAA AAACAAATACTAAAGCTTTTGCTTTCGCTGCAAATTTACTTCAATCGCGTATAATGAATAATAGTTACAACAGATTTACA TTTTATACTCAAAGTTGAGTCAGTTGTACTCTCTCAATGCTACAAGAGTGGCCAATAAAAG
CDS sequence (LotjaGi6g1v0206700.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCTTCATCACTAATCGTTCCAAATGTGGTGCTCTCCAACAACCGAAACTTACCGGTGATTGGATTCGGAACTGCTAC CATCTTAGGCTCCGCTCCCGGCGATGACACCACCAAGGTGGCAGTGCTAGATGCCATTAAGCTCGGTTACAGGCACTTTG ACACAGCTTCGATTTATGGGTCAGAGGAGGCACTTGGAGAAGCCATAGCTGAAGCATTAAAACTTGGTCTCGTTGGATCT AGAGATGAACTCTTTGTCACTTCCAAGCTCTGGTGCTCTGATAATCATCCTGATCTTGTTCTTCGTGCTTTGAAGAAAAC ACTTCAGTCACTGAAATTAGAATATGTAGATCTTTATTTGATCCACTGGCCCATTGCTTTGAAGCCTGGAAATTGGGACA TGCCTTATGATGAAGAGGCCATGGCCCCATTTGACTTGAAGGGTGTGTGGACAAAAATGGAGGAATGCCAACAACTGGGG CTTACAAAAGGCATTGGAGTCAGCAACTTCAGTTGCAAAAAACTTGAAAATTTGCTCTCATTTGCCAATATTCCTCCTGC TGTCAACCAAGTATGTCTAAGATGGTTGTATGAGGAAGGCGTAACTATGGCAGTTAAGAGCTACAACAAAGAAAGAATGA AGCAAAATCTGGAAATATTTGATTGGTCACTTACAAAAGATGACTATGAAAAAATTAATCAAGTCAAGCAGCACCTTTCG TTGAAGTATGGACCAGCAAAGTTCGTTGAGGACCTTTGGGATGAAGAAAATTAA
Protein sequence (LotjaGi6g1v0206700.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSSSLIVPNVVLSNNRNLPVIGFGTATILGSAPGDDTTKVAVLDAIKLGYRHFDTASIYGSEEALGEAIAEALKLGLVGS RDELFVTSKLWCSDNHPDLVLRALKKTLQSLKLEYVDLYLIHWPIALKPGNWDMPYDEEAMAPFDLKGVWTKMEECQQLG LTKGIGVSNFSCKKLENLLSFANIPPAVNQVCLRWLYEEGVTMAVKSYNKERMKQNLEIFDWSLTKDDYEKINQVKQHLS LKYGPAKFVEDLWDEEN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 4 | 191 | 188 | 9.8E-69 | ||
| PIRSF | 5 | 193 | 189 | 4.9E-57 | ||
| PANTHER | 7 | 191 | 185 | 1.1E-111 | – | |
| PANTHER | 7 | 191 | 185 | 1.1E-111 | ||
| SUPERFAMILY | 9 | 239 | 231 | 3.8E-63 | ||
| CDD | 13 | 235 | 223 | 1.68056E-59 | ||
| Pfam | 21 | 191 | 171 | 1.2E-31 | ||
| PRINTS | 45 | 69 | 25 | 2.9E-28 | ||
| ProSitePatterns | 49 | 66 | 18 | - | ||
| PRINTS | 106 | 124 | 19 | 2.9E-28 | ||
| PRINTS | 153 | 170 | 18 | 2.9E-28 | ||
| ProSitePatterns | 153 | 170 | 18 | - | ||
| PIRSF | 188 | 251 | 64 | 6.0E-9 | ||
| PANTHER | 190 | 255 | 66 | 1.1E-111 | ||
| PANTHER | 190 | 255 | 66 | 1.1E-111 | – | |
| Gene3D | 192 | 255 | 64 | 1.6E-14 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Oxidoreductase activity | Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of LotjaGi6g1v0206700.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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