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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0206700 |
| Transcript ID | LotjaGi6g1v0206700.6 |
| Related isoforms 5 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Reductase 1; TAIR: AT1G59950.1 NAD(P)-linked oxidoreductase superfamily protein; Swiss-Prot: sp|Q9SQ64|COR2_PAPSO Non-functional NADPH-dependent codeinone reductase 2; TrEMBL-Plants: tr|A0A151SBZ1|A0A151SBZ1_CAJCA NAD(P)H-dependent 6'-deoxychalcone synthase; Found in the gene: LotjaGi6g1v0206700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:50409140..50410327) extracted from Lotus japonicus Gifu genome v1.2.
ATTAGGATGAATCCTACTTGGCAGCAAAAGAAGTTAAAAGACTACTGCCAAGCAAAAGGAATATTCATAACTGCCTACTC TCCTTTGGGAGCCAAAGGTACCGTTTGGGGTACCAATGATGTTATGGACAATGAATTGCTCAAGGAAATTGCAAATGCTC ATGGAAAATCTTTTGCTCAGGTATCCATTATAACTTTCTTTCACATGAAAAAGTTTAACTTATATTTCGTTTTTTATAAA CTTATACTTTTTAATCTTAATCTAAGTGAGTTTTTATTCCCATTTTAGTCAAAGCAAACATGCTTAGGAACATATAAAAT AATAAAATAGAAGAAAAAATTCTAATAATCATATAGAGATATAGTTTAGCAATTTGAATTTGTACGACCATATTTGAGTT AGTGATGACACATAAGAAATTATTAGGTTTTTTATTGCGGAACCAAACATACTTTTCTAACTTCTCCAAAAAGTGATCAT GAGATTTTCCACCGTAAATCAAACACACTACACGTCTACCATTTAGATATTCATAATATTTTTAAACAATGCGAATTCTA CATAGATGATTAACACTACCATGTTATTCTTTGAACCAAAAAACAAACACTACCCTACACATGATATACCTTGTGGACTT GTGATTAATTAATAAAACAAAATTTAAGTATTGGAGTCTATATAAATTATATAAATTAAGTATATCCATTTCTTTTTAAA TTATGATTCACGAATGTTTTTGTCACCATATTTAGCTAACATAATACTTTCTGGTGTAATAGATATGTCTAAGATGGTTG TATGAGGAAGGCGTAACTATGGCAGTTAAGAGCTACAACAAAGAAAGAATGAAGCAAAATCTGGAAATATTTGATTGGTC ACTTACAAAAGATGACTATGAAAAAATTAATCAAGTCAAGCAGCACCTTTCGTTGAAGTATGGACCAGCAAAGTTCGTTG AGGACCTTTGGGATGAAGAAAATTAATACATGCAATATGGAACCATATACTAAAGCTTTATGACTATGAAGAAAAAACAA ATACTAAAGCTTTTGCTTTCGCTGCAAATTTACTTCAATCGCGTATAATGAATAATAGTTACAACAAATTTACATTTTAT ACTCAAAGTTGAGTCAGTTGTACTCTCTCAATGCTACAAGAGTGGCCAATAAAAGTATATTACTCTCA
CDS sequence (LotjaGi6g1v0206700.6) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAATCCTACTTGGCAGCAAAAGAAGTTAAAAGACTACTGCCAAGCAAAAGGAATATTCATAACTGCCTACTCTCCTTT GGGAGCCAAAGGTACCGTTTGGGGTACCAATGATGTTATGGACAATGAATTGCTCAAGGAAATTGCAAATGCTCATGGAA AATCTTTTGCTCAGATATGTCTAAGATGGTTGTATGAGGAAGGCGTAACTATGGCAGTTAAGAGCTACAACAAAGAAAGA ATGAAGCAAAATCTGGAAATATTTGATTGGTCACTTACAAAAGATGACTATGAAAAAATTAATCAAGTCAAGCAGCACCT TTCGTTGAAGTATGGACCAGCAAAGTTCGTTGAGGACCTTTGGGATGAAGAAAATTAA
Protein sequence (LotjaGi6g1v0206700.6) extracted from Lotus japonicus Gifu v1.2 Proteins.
MNPTWQQKKLKDYCQAKGIFITAYSPLGAKGTVWGTNDVMDNELLKEIANAHGKSFAQICLRWLYEEGVTMAVKSYNKER MKQNLEIFDWSLTKDDYEKINQVKQHLSLKYGPAKFVEDLWDEEN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 123 | 123 | 3.7E-58 | – | |
| PANTHER | 1 | 123 | 123 | 3.7E-58 | ||
| Gene3D | 1 | 125 | 125 | 4.3E-39 | ||
| CDD | 2 | 103 | 102 | 5.0867E-25 | ||
| SUPERFAMILY | 2 | 107 | 106 | 1.83E-28 | ||
| Pfam | 6 | 103 | 98 | 1.4E-12 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Oxidoreductase activity | Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of LotjaGi6g1v0206700.6, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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