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LotjaGi6g1v0211900.2

Overview

Field Value
Gene ID LotjaGi6g1v0211900
Transcript ID LotjaGi6g1v0211900.2
Related isoforms 4
Lotus japonicus genome version Gifu v1.2
Description Endoplasmic reticulum oxidoreductin-1; TAIR: AT2G38960.1 endoplasmic reticulum oxidoreductins 2; Swiss-Prot: sp|Q7X9I4|ERO2_ARATH Endoplasmic reticulum oxidoreductin-2; TrEMBL-Plants: tr|A0A151S2W1|A0A151S2W1_CAJCA Endoplasmic oxidoreductin-2; Found in the gene: LotjaGi6g1v0211900
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr6:50923486..50927780) extracted from Lotus japonicus Gifu genome v1.2.

CAAGTAGTAGAAAAATGTAGAGATATGTACTTGATTTGATGGGAAAATGTAGAGATATGTTGTGAATCCTAGCTATTTAC TAGAATATATATATATATATATATATATATATATTTTTTTGTTCTTAGTTGAGGGTGAAGGCTTTATTTTTCCTTATTGT TTGTTGCAGGGTACACCAAAGTACAGTGGCATGGTGGAGGATTGTTGTTGTGATTATGAAACTGTGGACCGTCTCAATGA GGAAGTGTTGAACCCATCCCTCCAAGAACTTGTGAAAACACCATTCTTTAGATATTTTAAGGTTTGCTTGTTGTCACTTC TTATGTCTACATTTGGCTTGAATTTTCTGTTGCTAACATTTGTACATAGTTGATGCTCACTTTTACTTTTTATATTGTAT AAGAGGCAGATAAACCATTAGGTTTTGAGGAGGGCCTTCTTGTTTTGATCTGTATTTTGTTGTCTCCAATTGACTAGCAT TTGTTCGTCCTATCCCTTAAATGACTAGCAAAGATTTCTTGCATCCAATTCATAGTCAGCGAACACAATTTAGCATTGAA GGGCCTTTCTAGAGAAAGAATTTGCAATAGGGTCCTAAGTTCGCAGCTTGTTTATTGATCATTTTTAAAGGTTTTATCCA TCACTGGACTATTCAAATTTTAATTTAACCAACAATACGAGACATAAGAGATACCCACAGTAGCACACATGCTGTAGAAA CACATGAAAGCTTTAGAATTGAGCACGCATAGCCATCTGCATTGTCAACTAAGCTTAGTGGCCTTCAGCTCAAACTATTC TATTCAAAATCATGTATTTTAATATATTGTACGTGATAACCCTATTAAATTGGAAATCTACTATTTATGTTACTATGTGG TGTGTGTTTAGGATGCATATTATTGATAGTGATCTACAAAGTTTGAAGTTAAGAGTGGATAGTGTTGAAAAGTATGTTTA CCAATGATATTATGCAACTAGCATATTTAAACAACACTTTAGATTGTGCATTTTATGTATGGATACCTACCGCTGAATTG AATATTATTTTCTGCTTTTGTAAACCCTCACATGTTTCCTCTCTGCTAAAGACTATTAGATGAAATTTGCTACAGGTTAA ATTATGGTGTGACTGCCCTTTTTGGCCTGATGATGGTATGTGTCGGCTGCGGGATTGTAGTGTATGTGAGTGCCCGGACA GTGAGTTCCCCGAATCATTTAAGAAGCCCAAGCGCCTTTCGTTGAATGACCTTGTTTGTCAAGAAGGAAAACCTCAAGCA GCTGTTGACCGTACATTAGATAGTAAAGCTTTCAGAGGATGGACAGAAATAGACAATCCATGGACGAATGATGATGAGAC TGACAATGGTGCGCTACTCTACATACTAATTTGCTTATAAATTATATCTGATCGTAGTTGTAGTTTATCCTAGTGATTGT GTGAAATATTATATAGTATATTAATCTGAAATGTTGAAATTGGAACTTAGCGTCCGTATATCTGCTTGTGTGGTTTAAAT TAGCTTATCTTGTTGAATAGATCTTGTATACACTAAGATATCTTTATGATTAAATTTCAATTTGATCCATTCTTGGTCTG ATCTTTTTAACTGTCAGAAATCGAGTGGCACATGGTTGAAGTAATCTTCATTTTTCACTTCTTGTAAAAGCTTATAACTT TTTTATTAGGTGGCACCATAGGAGATTCACTTCTAGTGTAAAATACTTCGTACTTTGTACACACACTGTTCTTGTGTCAA AAGTAAATCATTTTATAATATTCTGAATTTCTTACTAAGAAAATAAATGTATCAATTGAACGATTGTGTGTGTTTGTAGA TGAGATGACTTATGTTAATCTTCAACTGAATCCTGAAAGATATACTGGTTACACTGGTCCATCTGCAAGAAGGATTTGGG ATGCTGTCTACTCTGAGAACTGCCCCAAATGTAAGTTGCCTTCAGAAAGCTTATGCACATCAATTGCCTGTGCTTTTAGG TAGTTAGATGATACCTTTCCTATTATCAAATATTGAAGGACCAATAACTATGAATGTGTCTCTATGTACGGAGTAAATAC TTCCTTTTAAATGTTGCATTTCTTTTAATCATCTAATGTTTTATTTATCACCTGTGGAGCGGATATTAGTCATATCCTCT GGTTCATAGATGTTGGGAGCCATATGCAAAGCCCCTGAGACACCTAAGTGTTCATCCTTAATAATCACAAAAAAGTTTGT CTTTTGTAGATCCATCACAGGAGTCATGCCAGGAGGAAAAGATTTTGTATAAATTGATATCAGGTCTTCACTCCTCCATA TCGATACATATAGCTGCTGATTATCTACTTGATGAAGCTACAAATTTGGTAAATATCATGTTCCTCTCTTCAGCAGTAGC TAATTTTCTGTTTGAAAGAGACATTTGCATTGCTTTTGAGGAATTAATAGTTTACTGCATATTTGACCAAGTAGGTAGAC TACTGTTCGTCCTTGGTTTCTGTTTTACAGCCAAAAGTAATGGATCTTGTAAAATGACTTCTGTGATTTTTTATGCACTA AAATAATTTGGCAACATTGTAAATGTGAATATAATAAAATACAGTTCTTACTGAAGAAAAGCATATTTAAATCTCTAACT TCTCCTTCTTTTTTATTATTTCAGTGGGGCCAAAATCTATCTTTGATGTATGATAGAATCATGAAATACCCTGATCGTGT CAGAAATTTGTATTTCACTTATCTCTTTGTCCTGAGAGCAGTAACCAAAGTAAGTATGAATTATCCTGGTTTTAAAATCA CACTCAGTACATTCATAGATGGATCAATCTTAATTTTTTTTATTTTAGATATACTAGTTAAAAGTAATCTTCATGCAATC TATATTCCACTCCAGGCTGCAGATTATCTGGAACAGGCTGAGTACGACACTGGTAATCCTAATGAGGACCTTAAAACACA GTCGTTGATAAGACAGCTACTTTACAGCCCCAAGCTCCAAGCTGCGTGTCCAGTTCCATTTGATGAAGCTAAGCTGTGGA AAGGCCAAAGTGGACCTGAACTGAAACATAAAATTCAACAGCAATTCAGAAACATAAGGTATCAACTGAAAAATATTGGA CTTATCTCTGGCCTTAATACTATCCATTGATAGTTTTAGAGTTTTATTGTTGTTTATGCTCTAGTGATCATGCTGTATGG TACTCCCAAATATGTAGGAAAGATAATGGGTTTATGATGACTCTTATTAAGGCGTATCTTAGAATTCGGGTTAGGCCTAA ATCTACCCCAAGCTAACTTAGGGATGATGATTTCTCTACCCATTATAAGGACTTATTTGGCCTTATCTCTAGTCAATGTG AGATGGAAGTTGCTTTTTGAATTTCCACCTATTGGTGGATGGATATTAGATAGGGTTAAGTTAACTGATTTTTAAGAGGC TGATCTGAACATAACTTTTAAGTTTTCACTGTAGGAAAATGACTAAACAATTACTACACGTTCTGCTCTGCATATATTGT TCTGCCACCGTTTCTATTTACATGCTACTTCATTTCATAATCTCATTGACATTGGAATGCAGTACATTGATGGATTGTGT AGGATGTGAGAAGTGTCGGTTATGGGGAAAGCTTCAGGTTCTTGGTCTTGGAACTGCATTAAAGATTCTCTTCACTGTTG ATGGTCAAGAAAACTTGGATCAAACAGTAAGTACATTTGCTGGAGCCTTTCTTTTTTCCTCCCTCTTGTGGTTGCTACCT TTATGCATGTCGCCTTGACTCATATTGCTTCTGCATTCTGCAATGACCTTTAACTACATTATGCTTCCACTTAAATCTTT TACTGAAGCAGATACATCTTCTCTATTCTGTTTTCCTGTCCTGCTGCGGGGATATAATTGATAATTTGATAGTTAAATTA AGAAGTTGTAATCCAGCGAAGTATTTCCCTCTTATAATAGAAAAGTTTCTGGGTCTTCAGCTTGTATATTATTTTTTTGT GTAAATGACTCATCAATTTTTGTCTGTTACATACATCTCCCCTCTATTTTACTATGAATAGTAAAACATGATTGACTGAC CCTTTGTGTTGCACTTGACGATGATCTTTCAGCTGCAGCTACAAAGGAATGAAGTAATTGCATTGATGAATCTTCTCAAT AGACTTTCAGAGTCGGTCAAATTCGTCCATGAGATGGGACCTACTGCTGAAAGAGTCATGGAAGGACACCTTTCTGTACA TTCAAAATTGATATACTCATGGAACAAATTTTGGTCTCATGTACTTAAAGCTTAG
Download Genomic Sequence

CDS sequence (LotjaGi6g1v0211900.2) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGTGGAGGATTGTTGTTGTGATTATGAAACTGTGGACCGTCTCAATGAGGAAGTGTTGAACCCATCCCTCCAAGAACT TGTGAAAACACCATTCTTTAGATATTTTAAGGTTAAATTATGGTGTGACTGCCCTTTTTGGCCTGATGATGGTATGTGTC GGCTGCGGGATTGTAGTGTATGTGAGTGCCCGGACAGTGAGTTCCCCGAATCATTTAAGAAGCCCAAGCGCCTTTCGTTG AATGACCTTGTTTGTCAAGAAGGAAAACCTCAAGCAGCTGTTGACCGTACATTAGATAGTAAAGCTTTCAGAGGATGGAC AGAAATAGACAATCCATGGACGAATGATGATGAGACTGACAATGATGAGATGACTTATGTTAATCTTCAACTGAATCCTG AAAGATATACTGGTTACACTGGTCCATCTGCAAGAAGGATTTGGGATGCTGTCTACTCTGAGAACTGCCCCAAATATCCA TCACAGGAGTCATGCCAGGAGGAAAAGATTTTGTATAAATTGATATCAGGTCTTCACTCCTCCATATCGATACATATAGC TGCTGATTATCTACTTGATGAAGCTACAAATTTGTGGGGCCAAAATCTATCTTTGATGTATGATAGAATCATGAAATACC CTGATCGTGTCAGAAATTTGTATTTCACTTATCTCTTTGTCCTGAGAGCAGTAACCAAAGCTGCAGATTATCTGGAACAG GCTGAGTACGACACTGGTAATCCTAATGAGGACCTTAAAACACAGTCGTTGATAAGACAGCTACTTTACAGCCCCAAGCT CCAAGCTGCGTGTCCAGTTCCATTTGATGAAGCTAAGCTGTGGAAAGGCCAAAGTGGACCTGAACTGAAACATAAAATTC AACAGCAATTCAGAAACATAAGTACATTGATGGATTGTGTAGGATGTGAGAAGTGTCGGTTATGGGGAAAGCTTCAGGTT CTTGGTCTTGGAACTGCATTAAAGATTCTCTTCACTGTTGATGGTCAAGAAAACTTGGATCAAACACTGCAGCTACAAAG GAATGAAGTAATTGCATTGATGAATCTTCTCAATAGACTTTCAGAGTCGGTCAAATTCGTCCATGAGATGGGACCTACTG CTGAAAGAGTCATGGAAGGACACCTTTCTGTACATTCAAAATTGATATACTCATGGAACAAATTTTGGTCTCATGTACTT AAAGCTTAG
Download CDS Sequence

Protein sequence (LotjaGi6g1v0211900.2) extracted from Lotus japonicus Gifu v1.2 Proteins.

MVEDCCCDYETVDRLNEEVLNPSLQELVKTPFFRYFKVKLWCDCPFWPDDGMCRLRDCSVCECPDSEFPESFKKPKRLSL NDLVCQEGKPQAAVDRTLDSKAFRGWTEIDNPWTNDDETDNDEMTYVNLQLNPERYTGYTGPSARRIWDAVYSENCPKYP SQESCQEEKILYKLISGLHSSISIHIAADYLLDEATNLWGQNLSLMYDRIMKYPDRVRNLYFTYLFVLRAVTKAADYLEQ AEYDTGNPNEDLKTQSLIRQLLYSPKLQAACPVPFDEAKLWKGQSGPELKHKIQQQFRNISTLMDCVGCEKCRLWGKLQV LGLGTALKILFTVDGQENLDQTLQLQRNEVIALMNLLNRLSESVKFVHEMGPTAERVMEGHLSVHSKLIYSWNKFWSHVL KA
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR12613:SF5
1 386 386 2.0E-244 –
PIRSF
PIRSF017205
1 402 402 9.6E-134
IPR007266
PANTHER
PTHR12613
1 386 386 2.0E-244
IPR007266
SUPERFAMILY
SSF110019
7 377 371 7.59E-132
IPR037192
Pfam
PF04137
20 367 348 9.7E-126
IPR007266

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003756
Molecular function Protein disulfide isomerase activity Catalysis of the rearrangement of both intrachain and interchain disulfide bonds in proteins.
Subterm of
GO:0005783
Cellular component Endoplasmic reticulum The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached).
Subterm of
Part of
GO:0016671
Molecular function Oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor Catalysis of an oxidation-reduction (redox) reaction in which a sulfur-containing group acts as a hydrogen or electron donor and reduces disulfide.
Subterm of
GO:0055114
Biological process Oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi6g1v0211900.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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