Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0213000 |
| Transcript ID | LotjaGi6g1v0213000.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | GDSL esterase/lipase family; TAIR: AT3G11210.1 SGNH hydrolase-type esterase superfamily protein; Swiss-Prot: sp|Q9SRM5|CPR49_ARATH GDSL esterase/lipase CPRD49; TrEMBL-Plants: tr|I3SWD7|I3SWD7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0213000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:51109936..51115611) extracted from Lotus japonicus Gifu genome v1.2.
AAATCTTTCAACATTTTTTTTTCCTTTGTATAAAAAAACTATTTTTTCCTCATTTGCTAAATTACATATTTAAAGTCATT TTTTGTTTATCATAGCACAACTGGTAGATAACTGAATTCCTTAAACATTTAGTCTAGAATTCAGTTATTTTTTTTACCGA CAAGGTCTAACACAACTAATACATAGTTAGACTCTTTAAGCATTTAAAGCTCCCAGATATGCATATATGAGAAAATATGA GAATAAGGAAATAATTTTTTTTCCTTTACTCTTTCAACATATTTAAAAAAATAAAATAAGGTATAAAATTATAGTATATT TTACACGTGCAACATGATGAAGGAGTAAGCCTATATAAACCAAACATTGTCGCATGAAATAAGCACGATCCATCATTCAC AACTAAACTCGTGAATTTGGTACTCCACATGGTTATCATTGAACTTCCACGAGGTTAGGAAAACAAAGTGGCACTTCAAT CTTTTCTTGTTTCTCTAAGTTTCTTCTTACTTCACTCACTTTTTAGTTGTTACATTATATTACATTCATTGCAGATCTCT GATTCAACCTTAAACAAACAAAGTTACTCAGTCAATAGAGAAAGACAGGGACATGGTTGGACCTTCGAGGCCTCAGTTCG TTCTCTTCGGTTCCTCCATCGTGCAGATGAGTTTCAGCCATGGTGGTTGGGGTGCCATTCTTTCTGACATCTACTCTCGC AAGGTATATGGTACTCTCTCATAAGATTCTGCATTCATTCCTTTGCATTTTGATTCAGGAAGCATGATGGGGTGGGCTAA ATTCCTGACTTTTGAATGCAGGGTTTCATAGGGTGATCTGATCTCTAATTGATGGGTTTGATTTAAAAATGTCACATGAT TTTAAAAATTTGTGGACTCACTGTTACAATAGACCAATCCAATTAACTATCTTAAAAATTTAATCAATTGGATTAAGACA CATGAATGATTTTTATATTGTATTTTTAATTGACAACTGACTGGCTTAATATTTAGGTAATGCTTGATTATATTGTATGT TCCACCATCTTGTGTGTCTCCCAGTTCAATCATGTTGTATCATATTATATTCATCCTACCCTAAAGCAGGGTTTAGGGCT TTGTTTGATGTGTCCATTTCTGTTCGTAGGATCAAAATGTATCACCTTTCAATCTCATGACTTTGTTGTGTTATATTATT TTGGGCAAAACAAAACTAAAGGTACCATCCACACACCTAAACACACATACCCTGTTGTTATTTCAATATTCTAAAACTAA AAGTACCCCTTACAATGAGTCCGGGGGTGTGTTCCGATTAAGATCTCCCGGAATTTAATTTCCGGTGAGTATTTTTTATT ACCTGATTGTAATTTGTGGTAGTTATATTTTAACCTTCTGGTATGTAAATGTTGATGTCCTCGATGAATGCAATTACTTT GAAGAACCAAATGAAAGGTAAAGGGGAAAAGGAGAATATGCTGTTGAGAGACTAAAGAGAAGCTGCAGGGGATTGGAGGA TGAGCTTGATTTTAGGGTAGGAAGAGTAAAGGATCTGTATAAAGGTTTGAATGAAGTTAGAATCGCTTTGCTGGGATCAG TATAAATGGGAGACCTGCAGTAACTTGGTGCAGTAATTTAACTTAGATTCGTTCTTGTTGACCTCCTTTTTGGTTGCAAA TGATCAATTTCTCAATTTTGTACTTTACCCTTCCTTAGATAATTATATTCTCCTAAAAGATGCACTAATTGATTATTATA AAGTAGAAAGCCTTTGCAAATACTGCATCCAGATATTTACATTTCACAAGTTTATGTGTCAAGTGGAAATCTAAATATCC ATGTACCGATCTTTTGTGAGAGTGACAGTGTGTGTCCTTCCCGAGAACTTTTCTCTTTTTGTTTCTTTTCCTCCAAAAGA ATATTGATGATAGTCATCTGTTAAGCTATGCTAATGCAAAAAATACTCATTGTAGGCAGATATATCGTTACGAGGATACT ATGGTTGGAACTCACGGCGTGCTCTCCAAGTCCTCAATCAAGTTTTTCCAAAGGTATTGTACCTCAAAACTCAAAAGCTA ACCATTCATTTGGCAGATAACTACATTGCCTTAACTAAAATGATGCCTTGATTCAGCTTGCTTTCTTCATTATAACTGAT TGATGAAGCTTGTAGTTTAAAATTATTTATGGGTTGAAAGCACACAATTGCTTGAAATGATATATTCCCATTTCCTAGTT CCTTAATCTATTTTGATGTCCTAGGAGGAATGTTTCATTGTTTCATATTTTATAATCTCTAAAGTCATTATTAAATAAGT CTAAAATCAATAGCAATTGGTTTATGTAGTGAAATTAGTAAAACCTAAATCAACATGGGGGAAAATAGAAAAATAGAAGT ACAATTTTTTACACTAACCAATTGCAGAAACCTTATCTGACCGCCAACAATTACCTTGTAAAATGAATGTCTACTGAAAT TCAGAAGACACAAAATTTAAGATACTTTTCTCTAACCAATTGTATTTTCCTTGTGTAGAGGCTAGACAAGAACTTAGGAT GAACAATTTCCAAATCTTTCCCTGGTTATATATATGCTCTGCTAATGGTGTCCTGAAGTTCGCCATTGTATAGGATTTAT ATTTCAAATATGTGTTACATTAGGAACATATATAGGCACTGGTATTGTTTAAGTTTATCCAGGCTAATGTTGGATCCATG GAAATGGAATTTTTTCATGCTTATCGTGTGGTCCATATACTTTTACATGCTATCTCTTTATTAGTTTTTTATGCGATTGC ATTTTTCACATTATGCTACCTGTATCATATATTATTGTTATCCCACTTCCCAGGATGCTGCTGCACAGCCTTCTCTTGTG ATTGTTTATTTAGGAGGTAATGATTCCATGGGTCCTCACTCGTCTGGCCTAGGCCCTCATGTTCCTCTTGAAGAATATGT TGCAAACATGAGAAAGATTCTGGTTCATATTCAGGTACTTTTGCTATTTTAATCATTGAGTTCTTTCTCTATTAGTTCCA TTTACTGTGCCTTGGAGACAGATATCTTCACTTTCAGACACATCAGACACTTTTATGACAAATTTAAAGCCCATTTGATT TTAAACCAGCCATCACATTGTTGCATATCTTGCCTGTCCTGGATTATCCAAAGTTTTTTCCTCAGTTCTCACATATTTCT CATTAGCATAGGTTAGCATAAATCTATAATGCATTCAGTTGTGAAATATAGTTTGCTTGAGGTCATTGTATTCATATATA ATTGTATATGAAACAACATATGCAAAACAGTTTGGTTATAGAATAGAGCTATGATGTGTCAAGAAAATATAACATGTAGA TAATAGTGGAGTCCACCCAATTAGGGAATTGAAAAAAGCAGCAAAAAAGTTATCTAGGGAAAAATAGCGAAAAATGATTT GTTGCAGTGATTCAGGAATGGACACAGATTGTAACTCTTTTTTAATGAAGAAAAACAGTTCTTAAACATGATGAAATTTT GATCAAGGATCCCCTTCCACTCAGCTTCTCTTCCTATTTATAGGCAACATGCCTTATTCATCAATCCACTAACCAACTAC CATTCTATTATTTTGTTTTTGTGTTGGCTTCTAACTAACTATACCTAAAACAGAGTCTCTCTGAAAAGACACGTATCATT GTTCTCAGTTGTCCTCCTGTCAATGAGGAAAAAGTGCGTGGAAACGCTAGGTAACCTGAACATATTTTTCTTTACATTTC CATCTCTTTTACTTGTATTTACAAAACACACAAAGTTATAATCATATCATTTTTATTTTTCTTTCTTAATCAGTCCATAT TTAAGTGAGGTGATAAGAACAAATGAATTATGCGGAAGCTATTCAGAAGCTTGTGTAAAGCTATGCCAGGAACTGGGTGT GAAAGTCGTTGATCTTTTTAGAGCAATACAGGAGAGAGATGATTGGATGGATGTCTGTTTTACGTAAGCCTCTTGACTCT TGGTTTATTGATGTTTTTTTTCCCTAAATACTATGAAATTTGAGAATTGTCATGAAATTTATCCAAACCCTTCCCTAGCT ACTCTCTAGTACCATGTGCTTGCTTTCTTTGCAATATAGTCTAAACGTGCAATCTTCCATCTTACAGGCATATTGACTGA TACAATCTTTTGATCAATTTAAACATGGATTGGTCACTTGCTTATAAGCTGTAACATATTATGCTATTTTCCTCTCCCTT CACTAGACTTGTACATCCATAAACTGTTAACTATTTTGATCCTTGAAAGATTGGGTTGGCTTTAACTTGGTCCCGAAAAG ATAAGTGATATCAATTTAGTTCCTGAAAGTTGAAGAGTGACATCAATCTAGCCCGCTAAACATTTTGACATCAATTTGTT TTCTTCAATAATAATGTAGCTTGATCCATATAAGCTGACCCTATGTAGTGAGAAAAGACTTCAGTTGTTGGTTGTCTGTA GTTCTTCAATACGATATACGACATCAATTTAGTTTCTTAATACTCAATTTTGTGGTTTCTGCATAGAAAGATTTTTTGGA TGTTACTTTACATGTTTAGGGTACTAATTTGATGTCACATACCTCTTAAGGATTGTTTGGCTGGAGAGTTATGGAGAGAA AAGGAAGAGTAAAATTTTCAGTTTAAATATAAATAAATACTCTTCACCCCAATTTGATGTCACATATCTATTAAAGAACA ACCCTTTTTGGTACATAACTTATGAATGAGAATGATGTCAACCGATAAGTATACCTAAAATATCTTTAATTTGTTGTCAT CTATGATGAATTGTGCAGTGATGGTATCCATTTAGCAGCTGAGGGAAGCAAAATTGTGGTGAAAGAGATACTGAAAGTAC TTAAGGAGGCTGACTGGGAGCCATGCCTCCACTGGAGGTCAGTGCCCACTGAATTCTCAGAAGACTCGCCATATGATCTT GTCACCGCTGATGGGAAAAGTACACTGAATCCTTCTGAGTGGACTTTTTACAGAGAGGTTCAATGGGACTAGGTCCCTAT TTGCATTTTCTTCACATATATTGATTGGTTATCTACAACAGCATACCCTTATATTTTAGATAACCTTTGAAGTTATTTTA TTATTCAACTGAAAATGAGTTGAATAGAGCAGATCCATACTTCCATAGCTATATGCAAAAATCATCAAGTCTTGCATTTA GGGGATTTTTTTTTTAAAATAAGTATAGCATTAATAATGTATGAGACATATTTCTTTATTTTTAAAATTTACTTCCTACA TTTCCATTATTATTACTATCGGTATTTTTCTTCTTTTAATTGCGATTAGATTACTTGATTTCTTCATTGCTGGAGGAAAG TTCATGGTTAATTTTTTGCTTTTAAAGTTCAAGATTAATTGATAAACATACTGTTTTTGGAAACAGAGTATAAAATTATT CTTGCTCATAAATAGGGTTGTTGTTGCTTATACTCATACTCTTTGTTTCAGAAATTGTGATGGAATTGGTTTCTCCCATA GATAACTGCTTTTGTTATCCATGGAGATTGATCTTGAGCTGCCTATGCTTTAGCATGAGAAGCTTGATATTGAATCTAAT GAAAATGATGTTGCTGCTACTTCATGTGATATACATGTTGAGGTGCGAAATAGTGTATGTTTGAAAATTCTCCGAC
CDS sequence (LotjaGi6g1v0213000.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTTGGACCTTCGAGGCCTCAGTTCGTTCTCTTCGGTTCCTCCATCGTGCAGATGAGTTTCAGCCATGGTGGTTGGGG TGCCATTCTTTCTGACATCTACTCTCGCAAGGCAGATATATCGTTACGAGGATACTATGGTTGGAACTCACGGCGTGCTC TCCAAGTCCTCAATCAAGTTTTTCCAAAGGATGCTGCTGCACAGCCTTCTCTTGTGATTGTTTATTTAGGAGGTAATGAT TCCATGGGTCCTCACTCGTCTGGCCTAGGCCCTCATGTTCCTCTTGAAGAATATGTTGCAAACATGAGAAAGATTCTGGT TCATATTCAGAGTCTCTCTGAAAAGACACGTATCATTGTTCTCAGTTGTCCTCCTGTCAATGAGGAAAAAGTGCGTGGAA ACGCTAGTCCATATTTAAGTGAGGTGATAAGAACAAATGAATTATGCGGAAGCTATTCAGAAGCTTGTGTAAAGCTATGC CAGGAACTGGGTGTGAAAGTCGTTGATCTTTTTAGAGCAATACAGGAGAGAGATGATTGGATGGATGTCTGTTTTACTGA TGGTATCCATTTAGCAGCTGAGGGAAGCAAAATTGTGGTGAAAGAGATACTGAAAGTACTTAAGGAGGCTGACTGGGAGC CATGCCTCCACTGGAGGTCAGTGCCCACTGAATTCTCAGAAGACTCGCCATATGATCTTGTCACCGCTGATGGGAAAAGT ACACTGAATCCTTCTGAGTGGACTTTTTACAGAGAGGTTCAATGGGACTAG
Protein sequence (LotjaGi6g1v0213000.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVGPSRPQFVLFGSSIVQMSFSHGGWGAILSDIYSRKADISLRGYYGWNSRRALQVLNQVFPKDAAAQPSLVIVYLGGND SMGPHSSGLGPHVPLEEYVANMRKILVHIQSLSEKTRIIVLSCPPVNEEKVRGNASPYLSEVIRTNELCGSYSEACVKLC QELGVKVVDLFRAIQERDDWMDVCFTDGIHLAAEGSKIVVKEILKVLKEADWEPCLHWRSVPTEFSEDSPYDLVTADGKS TLNPSEWTFYREVQWD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 256 | 256 | 2.3E-130 | – | |
| PANTHER | 1 | 256 | 256 | 2.3E-130 | – | |
| SUPERFAMILY | 5 | 210 | 206 | 3.82E-36 | – | |
| Gene3D | 5 | 236 | 232 | 3.1E-60 | ||
| CDD | 8 | 207 | 200 | 4.46648E-87 | – | |
| Pfam | 11 | 197 | 187 | 1.4E-22 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi6g1v0213000.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…