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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0213100 |
| Transcript ID | LotjaGi6g1v0213100.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | DUF630 family protein, putative (DUF630 and DUF632); TAIR: AT2G34670.2 benzoyl-CoA reductase subunit C, putative (DUF630 and DUF632); Swiss-Prot: sp|Q54QC0|MYBU_DICDI Myb-like protein U; TrEMBL-Plants: tr|G7IGH9|G7IGH9_MEDTR DUF630 family protein; Found in the gene: LotjaGi6g1v0213100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:51116989..51123502) extracted from Lotus japonicus Gifu genome v1.2.
GTTGGTTGGTGTAGCTAAGTTACATATTTCAGGAATAATGTTTCTTTCACATTTCAGGTTTAGTTTAACTCTCACGTTTC TATAGGCCGGGTTCGAACCTCCATTTGGATAATAAAATATCATTTTGTGGGAAAAATTCTCCTAAGAAAAATTCTTTGAC GCTTATTTCTAAGAATTGCTAGTTTTCCCAACATGTCACGGGTGTTTATCTGATAATATCAAAGTGTTCTTCCTATTCTA CCATTTTTATAAGGGTTTTGATTTATTCACACACCTTTTTCTCTACCATATTATTTTTCTACTCTCTTTATTTTTTTATC TGTCGAATCACTCATCATATCTCATATCATCCTTCTCTTTCCTTCATGTATATTAAGGTGGAGGTTATTGACTTATTGGT GAACATAACTTCATTGATTTTATGACCAAAAAAAAACAGATGAGTCTGCCAAGTCAGAAAAAGCTTTTGAGAAAAAAGCA CTTTCCCTCTTGTATAGAGTTGATCTTGAGCTTTGCTTTGCTCTATGACCCTCATTCCGATTGCAAAGCTCAAGTGACAC TATAAAGTACACACCTTTACACTCAATGGGGTTCAACCACGTGCTGTTGCTGCTGCATGCTCTCTCTCTCTCTCTCTCTC TCTCTCTCTCTCTCTCTCTCTGGTAATGCTCTCTCTCTCTCTCTGCAACTCTTCTTCTTTGGATACTTGTCTTCTCGGGT TTCGAGCTGGTTGTCTCTCTCTCTCTCTCTGTCTCTGTCTATGTCTTTGTTTTGTCAAGCATGAATGAACAAGAGGGAAG TGATTCTCTCTCTGAGTAGCAGTAGATTTGTGTATGTCAGAACTACTTTTCTAGTTTCAAGATTTTCTTCTGCATTTGCA AATTTGTTTATCTTAATTTCTCCTGAAATCTGTAAAAAAATATTTGCAACTTTTTTCTTGTATTCTATTTCTTATGTAGG ATTTGGTCATGGTCAATAGTTTGCATTTTCCTTTTCTTCTGTGGTTTGTAGTGACTGTGGTGCATGTACTGTTCTGATTC TGGGTTTGTGTTATGAAGATTTGTCAGTTTCATGTTTATTATATAGCCTTATGGATATGAGATGGATATGAGAACTGTGG AATGTTTTTAATTGGAGGAGTGTGTATTGTCTTTATGTCTTCCTTGTGATTTATATGTTTTCTGGGGTTTTGTAGGTGAG ATTCATTGGCTGTTGAATTGTCAGAATCTATTGATGAAGCACACCAACTGATTTCTTGACAATATTAAGATCATTTCATA GTTCACTATCTGTTTACAAAGTTTTTGGGCACTTTTATGACTTGTGAGCTTCTTAATCCAAGATATATTGTATAATCAAA AGGCTAGTATAATCAACTGATCATATATCTTCCAAAATGGGATGTGTTTTGTCAAGTGCTAATGGGGATGAGAGGCTTGG CAAGTGCAAGGAAAGGAAGAGGATAATCAAACAGTTACTTGGTTATAGAGAGGAGTTTTCTGATTCCCTATTAGCTTATT TGAAAGCATTGAGGAATGCTGGTGCCACCCTTAGGCAATTCACCGAGTCAGATACATTAGAGTTTGAAATTGCCTCTAAT GGCGTGGCTGACCCGCCTTCTCCACCTACCCATCTGCTACCACCACCCTTGCCTCCTTTTCTTGCTGACGAGACTGCGTT GCAAATGGCCCAAGAGGAAATACAAGAGAATGATAACAACTATGTTCCTACACTGGAAACTGATCCCAGTGTGAACTCGC ATTGGCTATTTCAACCTGCTGTTCAAGTAGAATCAGTTGAGGAGGAGAATTGGGAAGAAACTAAAACAGAATTCGAGGAT GAGGACCCAGACTCAGAAGCTGGTGGGAGTGTTGGAAAATCGCGTAGTGTGAAGCAACCTTCCATAGGACCAATTGATGA TAATTCCTCTGCATTGAGTATATATAGAAAAGAGACGACAACTTTGCCGATGGTGGTTGGTAGAAAAGGGAAAACATTGG AGGGTATAGTTAAAGAGTTAGACGATTATTTCCTGAAAGCATCAGCATGCATAAAGGAAATTGCTGTTCTTATTGATATC AGTGGAGCAGATACTCTTCTGCGGCAGAATTCTAGGCGTCACAATAGTAAGGCTACATACTCTTTGTCCTTTAGTATTGT GGAAATTCCATTATGATAGATTAGCTTTTGTGGTTCACTCTTACCCTTTGCCTCCTGTCTTTTCTGATCTTCATGGTTTC ATTTGATGACTTTTAATATTCATAGACCTGAGCTTAGTTACTTGTTTTTTAAAAAATGTTTTAAGATATTTCCGTGGAAA TTTTACAGCTTGTGTAATAACTTCTGCATTCATTAGGAATTGCAGTTATTGTAGAGCTTTGTGGCATTTTTAAGAGGTCA CAGAAGTCTGGTAGATAATCCTAAACAACTGAAGTTGTGAAGACTTAATTTTAAACTATGTTTTCTGAAATATAGTATAC AATATGAAGCCTTTCTTATTGACTATTGAATGAGAAAATGAATGGAAATAGTGGAAAATGAAGGAAGATGTACAAGAGAG GAAACAGAGTGTTTCTGTAATATGACTATCAAAGTGATTCTATTCCTTAGATAGATTTCTCAGATTAATACAATTGATTG ACAAACATTGTCTATATCTGGGTGATGATGTTTTGTTATTTGTGCTGTTATTTGTAGGGAAGAGAGACAGTTCTGCAAAG GTCTTCAGTGTACTGTCACGGAGTTGGTATTCTAAGTCAACCCAGTTCACCAAAGATACCACTGAGTTTTCTGGTCCTAA TGAACCATGCAAGCCTGGGGCTCATTGTGCCACACTTAAAAAATTATATGCCGCAGAGAAGGAACTTTTCAAGGCAGTTA AGGTACGCCAATGAAGAAAATAATGAGCAGTCCAGGGGTACTGGTTTTGTATGTGTTTAGTGCAGATGTGAAGCATAGCC ATATATTGAATTAATCTGGCTCATATCTTACTTTGTAGACAGGAAATTGGAAATTTGCCAATTTGGTGTGGCCCATGTAT TTTGGGGCTGTAATAAGAGACTAACTATCATTTAATGCAAAAGATATTAGGGAAAAAAGATCAGTAAACAAGATAGAGAG AAAAATAAGTGGAAGGTCTTGAATAAAGAATATTAGTATCCCACTAGCCCTGATATTTTGGTGCTGTACAAGTAACCCCT TGTCTTAGTAACTGCACCTTCTTATATTCTCCCAAATTCTTCTTTTCCTTGCAATATGTGACCCATGTCTACTTGCTCGG AAAATACCATTCTCTTCGCCCTTCCATTTTCTTATTTTAAGTCTATTTCTCATTGTGATCCGGTTCTTGAGTCTAATTAC CTTCACCTTTATTCTTAGGCTATTTAAATATGGAAGGCTGTATAGCTTACAGCTCAATTTATCTTAGTACTGGCATTTTC AGTGAAATGACTTAGTTTACTTCTATCTCTTGATTGATAACCTACTTTCACGTGGGTTGAATTGTTGTTTGAGATCAGTT ATTCCATTTAACCTATATTCATAACACACTTTTTTCCCGTGTGGTAAACATGGAGGCAGAGGCATCCAGTAAGACTAGGC TCATTCCCTTTGTTGAGATGAGGGAGTTTGATGGAGTCAATCATGTTAAATAGAGTTAGTCATGCTAACAACCGTTGATT CATTAGTGGCTCAGTAATTGAAGGAAGAATATATGGACACTGCAATTAAAAGCTATCGTTTTTGCCTTTGTTTTATATAC TGAAACTGCCATGTATTCCACTTAATTTTAAATTTGGTTTCAGACTTGTTTATTTATTTTATTTGAAGGGAAATCTTTGT ATTTTTTTGTTTCAAATCTTTGGCAAGAATGTACTTCTTTTCTCATTTCTCAAATGTCATGTAATGTAGGAGGAGGGAAT TGCCAAATTGGAGTTTGACAAGATGTCCTTGTTACTGGAAAAGCAAGAGAATGAGAACCTTGACTTGGTCAAAATTGAGA AAACTCGATCAAGAGTTGAGAATTTGCAATCAGATGTAATAAGCCTACAGCAGTCTATCAGTGAAACAACTTCATTAATT TTGGAGGTTATAGATGAGGAGCTTTTACCGCAGCTGGTTGCATTAACTGCAGGGTATATTTCTCAGAACTTGGATGCAAA AATTAGACTTGCAACTTAACGAAATGCACACCAGTCTAAGTTTGGTAACATTATTTTCTCCTCTTAAAGATATTTGAAGA AATATATTAAGAAATAGTGTGGCTGTTGATCCCATTCAGTTACTTTCATAGAGATCCCATTGTGTCATTGTTGAATTTAT CTAATAAAGAGTTAATGTCATTTTCTCTTTCCCTATGGTGAAAGTCCTCTAAATACGGTATGGGTAATTTAGGAGGCAAA TGGCGAACATCATTGAAGAGTGTAATAACAATATCTGAATCATGTCCTGTGTGGTGCTTTAAACTGTTGATTATTTTGCA GGTTGGCACAAATGTGGAGGACAATGCACGAGTGCCATAGGGCCCAAGCACTCATCTCCCAGCAGTTGAATAACCTCAGT GATAACCATAACACAATACTGAATTCTGAATATCATCACCAGGCTACAATTCAGTTTGAGACTGAGGCCTCTTATTGGTA TAATAGCTTTCGCAAACTTGTGAAATCTCAACGAGATTATGTAAGTACCCTCCATAGGTGGATTGAGCGTACTAGCTGCC TCAGGGATGGTCATCAACGTAAGGATCACTCCTCTATTGATAGTATTTGTCAACAGTGGGAGCTTGGGCTTGGCGGATTA CCTGACGAGGTATTTTTTGCCCAAACTTGATGTTATTTTTCCTGTGCGCTTTGTTTATTTTTCTGAAAGGTAAAGTGTGC CCATTAATTATATGCTGAGGGAGAGAGCGATAGAAGAGGGTTGGTAACCTGACCTGAGACATCAATATAGAGTTGAAAAT TATTTTAGCAGAACTGTTATGCTATTCTATTTTAACAGGTAGTAATCTCATACTGTTCTTTTTCAAAATTCAAATTACTG CAACTGCTTTGTTTTGTTTGTACTGTCACCTCCTTTTGTTCTTGTTTCACATGGGCCTTGGTTCTGCACTTTCGAGAGAG TACAATTGCGGTATAGCTTTAAGTTTTGACTTTTGTCTCAGTCAGTGGAGCAATATTGAGAATAAGCTGAGAGGAAGTGT GAGCAAATGAGAGAAAATCTAAAATAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGTGTTTGAGTGAATGATTCAGA TTTTCATTTCTTGTTAAATGTACTAGAGTAATTGTCTTTACTTTTTACACAATGAGCGAGCTGTAACTACTCTTAACTAA ATGCAACAGTTATAGATGTCACTTAACCAAACTCTAACTAGCATCAAAACTACTCTAACTGATTGCAAACATAACTTAAA CTTACAAAATGATCCATTAATTCTGTATGTCTTTGCAAGATCAGTCAACTTCTTAAAAAGTCTGACTATAAACTCGGGTT AACTCCAGACTTTGACAACCATGCTTGGCTTGACTGGCATAGTTCAGGGTATGATCTAGTTTGCCTATCTGAACTAATAG AGATATAAACCATCCTTGCATTATCAATGTGCTCAAATATTGTCTGAAAGATTAAATGATTTATATGGAATAAACACAGA GCACTTCTTGCTGCATGAAGACTCTTCTTTCTCCCCTCTGTATTACAAATCTGTCAAGTATTTTGTGAGTGAATTTTGTT GTAAATATCTAGATTTATAATTTTCTGTCATCGCTGGTGTGGTTACAGGAGACCTCTGATGAAATAAAAAGTCTTTTGTT ATCCATCCGTTCCATTATTGCCCAACAGACCGAGGAAGATAATATTCTGAAAAGGTTGGAAAAAGTTGAAAGGAGGTTGC AAAAATGCTTGAACTCGCTGGCTGCGATGCAAGAAAAAAATGAACCGAGCTCTGAAGATGATGGAGAAATAGCTGATATG AACACCAAGCTTCCATTATATGCTAAAAAAGCTGAAGCTGAAGCCTTAAAGAAGCAAGTGGAAAGTGTGAAAGAAAATTA TTTGGATTCTGTCCAGTGTAGTAGGGCCATGACACTCAATCACCTCAAAACTGGACTTCCCCATCTCTTCCAATCACTGA TGGAATTTTCAAGTGCTTCAGCCCAAGCAATTGAGAGTATCAATGCCCAGTCAAGCCAGTAGAATGGAGTGAATAGTGCA TCACAAACTTCGTGATATGAACAAAGAATATATGTTGGTGATATAAATTGTGTTCTTGATGGCCTGTATATTGAAATAAC ATTATGTTGAGCCATTCTGATGGTTTTTTGTATACCTTCAACTCTCCTTAATCCTTTACTACACTGAAAGTACTGAAATG CAGTGATTGTGTAGAAAACATATGTGGCAGGGAGATTTTAAATATATACCATTTTATAAGATTAGGAAATTGTCATGCTA TTTAGGACAGTACTTTCGCACAACTAATAGTAGC
CDS sequence (LotjaGi6g1v0213100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGATGTGTTTTGTCAAGTGCTAATGGGGATGAGAGGCTTGGCAAGTGCAAGGAAAGGAAGAGGATAATCAAACAGTT ACTTGGTTATAGAGAGGAGTTTTCTGATTCCCTATTAGCTTATTTGAAAGCATTGAGGAATGCTGGTGCCACCCTTAGGC AATTCACCGAGTCAGATACATTAGAGTTTGAAATTGCCTCTAATGGCGTGGCTGACCCGCCTTCTCCACCTACCCATCTG CTACCACCACCCTTGCCTCCTTTTCTTGCTGACGAGACTGCGTTGCAAATGGCCCAAGAGGAAATACAAGAGAATGATAA CAACTATGTTCCTACACTGGAAACTGATCCCAGTGTGAACTCGCATTGGCTATTTCAACCTGCTGTTCAAGTAGAATCAG TTGAGGAGGAGAATTGGGAAGAAACTAAAACAGAATTCGAGGATGAGGACCCAGACTCAGAAGCTGGTGGGAGTGTTGGA AAATCGCGTAGTGTGAAGCAACCTTCCATAGGACCAATTGATGATAATTCCTCTGCATTGAGTATATATAGAAAAGAGAC GACAACTTTGCCGATGGTGGTTGGTAGAAAAGGGAAAACATTGGAGGGTATAGTTAAAGAGTTAGACGATTATTTCCTGA AAGCATCAGCATGCATAAAGGAAATTGCTGTTCTTATTGATATCAGTGGAGCAGATACTCTTCTGCGGCAGAATTCTAGG CGTCACAATAGGAAGAGAGACAGTTCTGCAAAGGTCTTCAGTGTACTGTCACGGAGTTGGTATTCTAAGTCAACCCAGTT CACCAAAGATACCACTGAGTTTTCTGGTCCTAATGAACCATGCAAGCCTGGGGCTCATTGTGCCACACTTAAAAAATTAT ATGCCGCAGAGAAGGAACTTTTCAAGGCAGTTAAGGAGGAGGGAATTGCCAAATTGGAGTTTGACAAGATGTCCTTGTTA CTGGAAAAGCAAGAGAATGAGAACCTTGACTTGGTCAAAATTGAGAAAACTCGATCAAGAGTTGAGAATTTGCAATCAGA TGTAATAAGCCTACAGCAGTCTATCAGTGAAACAACTTCATTAATTTTGGAGGTTATAGATGAGGAGCTTTTACCGCAGC TGGTTGCATTAACTGCAGGGTTGGCACAAATGTGGAGGACAATGCACGAGTGCCATAGGGCCCAAGCACTCATCTCCCAG CAGTTGAATAACCTCAGTGATAACCATAACACAATACTGAATTCTGAATATCATCACCAGGCTACAATTCAGTTTGAGAC TGAGGCCTCTTATTGGTATAATAGCTTTCGCAAACTTGTGAAATCTCAACGAGATTATGTAAGTACCCTCCATAGGTGGA TTGAGCGTACTAGCTGCCTCAGGGATGGTCATCAACGTAAGGATCACTCCTCTATTGATAGTATTTGTCAACAGTGGGAG CTTGGGCTTGGCGGATTACCTGACGAGGAGACCTCTGATGAAATAAAAAGTCTTTTGTTATCCATCCGTTCCATTATTGC CCAACAGACCGAGGAAGATAATATTCTGAAAAGGTTGGAAAAAGTTGAAAGGAGGTTGCAAAAATGCTTGAACTCGCTGG CTGCGATGCAAGAAAAAAATGAACCGAGCTCTGAAGATGATGGAGAAATAGCTGATATGAACACCAAGCTTCCATTATAT GCTAAAAAAGCTGAAGCTGAAGCCTTAAAGAAGCAAGTGGAAAGTGTGAAAGAAAATTATTTGGATTCTGTCCAGTGTAG TAGGGCCATGACACTCAATCACCTCAAAACTGGACTTCCCCATCTCTTCCAATCACTGATGGAATTTTCAAGTGCTTCAG CCCAAGCAATTGAGAGTATCAATGCCCAGTCAAGCCAGTAG
Protein sequence (LotjaGi6g1v0213100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGCVLSSANGDERLGKCKERKRIIKQLLGYREEFSDSLLAYLKALRNAGATLRQFTESDTLEFEIASNGVADPPSPPTHL LPPPLPPFLADETALQMAQEEIQENDNNYVPTLETDPSVNSHWLFQPAVQVESVEEENWEETKTEFEDEDPDSEAGGSVG KSRSVKQPSIGPIDDNSSALSIYRKETTTLPMVVGRKGKTLEGIVKELDDYFLKASACIKEIAVLIDISGADTLLRQNSR RHNRKRDSSAKVFSVLSRSWYSKSTQFTKDTTEFSGPNEPCKPGAHCATLKKLYAAEKELFKAVKEEGIAKLEFDKMSLL LEKQENENLDLVKIEKTRSRVENLQSDVISLQQSISETTSLILEVIDEELLPQLVALTAGLAQMWRTMHECHRAQALISQ QLNNLSDNHNTILNSEYHHQATIQFETEASYWYNSFRKLVKSQRDYVSTLHRWIERTSCLRDGHQRKDHSSIDSICQQWE LGLGGLPDEETSDEIKSLLLSIRSIIAQQTEEDNILKRLEKVERRLQKCLNSLAAMQEKNEPSSEDDGEIADMNTKLPLY AKKAEAEALKKQVESVKENYLDSVQCSRAMTLNHLKTGLPHLFQSLMEFSSASAQAIESINAQSSQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | 1 | 58 | 58 | 1.4E-15 | ||
| PANTHER | 1 | 624 | 624 | 5.0E-226 | – | |
| PANTHER | 1 | 624 | 624 | 5.0E-226 | – | |
| MobiDBLite | 132 | 177 | 46 | - | – | |
| MobiDBLite | 134 | 153 | 20 | - | – | |
| MobiDBLite | 160 | 177 | 18 | - | – | |
| Pfam | 202 | 503 | 302 | 2.6E-74 | ||
| Coils | 334 | 354 | 21 | - | – | |
| Coils | 519 | 539 | 21 | - | – | |
| Coils | 559 | 579 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi6g1v0213100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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