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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0230200 |
| Transcript ID | LotjaGi6g1v0230200.2 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Calmodulin-binding family protein; TAIR: AT4G33050.3 calmodulin-binding family protein; Swiss-Prot: sp|O82645|IQM1_ARATH IQ domain-containing protein IQM1; TrEMBL-Plants: tr|I1MSF5|I1MSF5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0230200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:53899507..53904030) extracted from Lotus japonicus Gifu genome v1.2.
TATTATTTTTTTCTTTAAAAAAATCCTAACCTGGGCTGGGTTGTGTGTGTGTGTGTGTGTGTGTGTGAGTGTTTATTATA GATTGTAATATTGTTGTTTTTTTGACAAAAAAAAACTGTTGAGTTTTGCAACAAAAAAAATAAAAATAAAATAATGAAGA GTAAAGCTGAAGCAAGCAAGTTGCGCAGCACCGTTCTTCTTCGACGGCGACGGCCCTGCACCAGCATGGGGCGACGGCGA CGGCGCTGCACCTCCACTTCCTGGCTCCCTGCAGCTGCTGTCATGCGCAGCAAGAGGACTCAGAGTCTCAGACCACCCTC TGCTGCCTTCTATCCCCGATCATGTTCCCTTCGCTGACTGGTTCAGGTGCGTAATCTTGTGATACCTGTTGCTATCTTAT GGTGGTCATGGAAATGGCGCAGTAATCATGTGTTTGAGCTCATTACTGTCACTTCACTTCTGAGGTCCATGTCTCCATGA TCATTGTCTTAGAGACACTATTCTAAGGGTTAGATGCATGTGGCATTGGTTTCTTATGAGTTGACTAGGCAAGCTGTGAG AGACAACGCTTCTTTATGCATTTAGAGGTTTCCTCTTCAAGTGCCATTCAGCTTCGTTGTTGTGATTTGATTGTGTAGTT TTTTTCTGCATTCTTCAAATGTAGCAAAAAAAAGCTATATATATATATATATATATAAACAACAGAAACAAATAACCAAT TCTCCGACAAGCTGTATCAGGGTAAATGATTTGCAGAATCCATAAGTGAAAATTTGATTGGCTAACTTTATGTCATTTCT TCAACTTTTTTTTCAGTCCACCGACGGTGCTGTAGCTATTTCTCAGCTAGAGAAGTCAACTAGGGTCACCACAACACCAT AATATAGGAAATCAGCAGGACACCAATGATGAATGTGGCAGGGAGAGTGTGAAAGGATAAGGAAAAGGAAGATTTCTTGG AATCATGAGTAAGAAAAGTAGAGGAAAAAAGAGAAAAAGATCCACCTAATGTGAGTAGAAAACCTCCACATAAGGAGAGA ACTCCTAAAGGAAGTGGGAAAACCCCAAAAAGGATAAGAAATCCCCATGAAAGGGAAAGAAAGTGAAGTGAGAAGAGGAC AGCATTTTCCCCCATCATTTTATAGTGGGTTGGCCGTTTGTTAATTGGCGGGGCTGGACATGTTTTCTAGCCCCTCCATT GGCGAGTCAGCTCATCCCGTCCCGTTTTTTGCAAGCTACGGCTGCTTATATAATAGTAAGGATGCCTGTGACTCTGAGAT AGATTCATAGTATTTACTCCATTTATATTGAGTTCTTGGAATCAGACTTCAAACTCATATCTGAAAGATAATATCTTCAG CCTCTATACAAAAAAGGTAAATCATTCATGTGGGATTTTCCTCTCTGTTGCTTTTCTCCATAGTGGCTTGTTTTGTTTAT GATCTAGCTATAACAGTTTATCTAACACTGAGATATATAATATAGGCTAGCCTATAATATATTATTTGAGCAGGGCTGAA AAAGAGAGTTTTCTTGAAACAAATTGAAGTTGGGGTCTTCAGCTCCATGTGACTATCATTTTCCTTGCTAATATCAGCCT GGGAGGAAATTGTGAGCCATTCATTTTTTGGTTTGTCTTGCAACATCAACTTTGGTTCCAAAGGTGGAGCTTTGATTTTG AGATCAGGAGGAAGCTTTAAGAAAAGAGAATCAGAAAGTTCAAGTTGGAGTTCAGGGATAGCCAAGGGAAGCCATTGGGA TTATAAATACTAATACACAAGGTTTTATATTGTGTTCGCGGTTCTTCTTATTGCAGAAAATTGTGAATAAACAAGGCTGT TGCAAACAAAATCACTGTCGCGTTGCGGTTTTGGAAACCTTCCAGGTATGACCCTTGCAAGAAGCCTTCCAGGCATTGAA AAGATGGAAAAACTGCCGCATAAGGCAGTGCCATTGCTGTCTCTTCCTGAGCTTGATGTTGCTGCAACTAAACTTCAGAA AGTCTACAAGAGTTACCGAACTCGAAGAAACCTTGCAGATTGTGCTGTTGTGGTGGAGGAGCTCTGGTTAGTTAGTCTCA ATTAAAACCAATATTTTAGAATTTGATACAGCCTTAAGCTTCTGCCATGTTATCAACTGATGGTTTTCAAAAAATTGCAG GTGGAAAGCATTGGATTTTGCTTCTCTTGAATGGAGCTCTGTTTCATTCTTTGATGTGGATAAACAAGAAACTTCGGGGT CACGGTGGGCAAGGGCAAGGACAAGAGCAGCTAAGGTATATTCCATTCAAAAAAATGAACTTTGTTCTAAGTGAAACTAC TAGTATATTTGGATCAGTTTACCCAGAATTGATTTTTCCTTCAGAATCAATTGTAGAAGAATTTTCAAAGACCTTCATTC ATTTTCTCATTCATGTTCTTTTATTTGGGGTATTGTGTCATTGCTAATTTTCTCATATGCAGGTTGGAAAAGGTTTGTTC CAGGATGAAAAGGCACAGAAATTAGCCCTCCAACATTGGCTTGAAGCTGTAAGTTTAATCACCCATTATTTCAATATTAA CTCTATTGAGCCTTGAAATCATATTAATTACCCTTTTGTTTATGGTTTATTCTAATGTCAACAATTTCCATTCCTTCTTG TTTCTGCACAGATTGACCCGCGACACCGCTATGGACACAATTTGCACCTGTATTATGATGTCTGGTTTAAAAGCCAAAGC ACACAACCATTTTTCTACTGGTAAATATCTAATAACTTATATCTTCTTCTTGATTACAATTATCATGAAGCTGGTAAAAA CTATAGAAGCTAAGATGGTTAACTTTGTACTTTATAAATTGCAGGTTGGATGTTGGAGCTGTTAAAGAAATAAATCTAGA GGAATGCCCAAGAGCCACCCTACAACGCGAGTGCATTAAATATCTTGGACCAGTAAGTTAATTATCACACATTTGTTACT ATACATATAATCTTGTCTCATATCTGATCTAATGTGTATCTTTATTGTTATCATTGCAGAAAGAAAGGGAAGAATATGAA GTAATTGTTGAAAGTGGGAAGCTGGTGTACAGTCAGAGTGGGAGGCTTGTGGAAACTGATGGAATATCCAAATGGATATT TGTTCTCAGCACCACAAGGGCCTTGTATGTGGGGAGGAAGCAAAAGGGTGCATTTCAGCACTCAAGCTTTCTTGCCGGTG CTGCAATAACAGCCGCAGGAAGATTAGTGGCTCACGAGGGTGTGCTTGAGGTCAACACTTTATTACAAATTTCAATAATT GTATCATAGGTCAATTTCTCTTACATAAAGTACTGTGTAAACATTGCAGGCTATTTGGCCTTATAGTGGTCACTATCACC CAACAGAAGAGAACTTTCGAGAATTCATAAACTTTCTTGAGGTCCATAATGTAGACCTCTCTAATGTCAAGGTAATTTTT TTTTACCTAGCTGATATTTGTGGTATAGATTAGTTGAGATGACCATTTTCTTTCTTGTTTTCTTGCAGAGATGTGATGTA GATGATGATGCTCCGTCATATGTGGGGACAGATTCATTCACAGCCGCTACTGAATCACAAGAAATCAAGGGTCCTATTAT TAATGCTAGTGATATCAATAATGCAATTGTTCATGAAGAGGTTAAGGTCAAGAAGGTTGAGGCACCACTTGCATTTGATT TCTCAAAGAGGTTGTCACGCAAGTGGGCCACTGGTGCTGGAGCCCGTATTGGATGTCTCCGTGACTATCCTGAACATCTT CAATCAATAGCATTGGAGCAAGTTAATTTGCTCCCAAAGCCTGCAGCTGCACAAACATGTAGTTATGGTCCAATCCCGGC TCCAAGACCAATCCCAAAAGTTAGAGTTTCTCCTAAGCTTGCATACATGGGATTACCTATCCCAAGAACCCCAATTCCTG CTGCAAGTTAGAGGTCTACAATTGATTTTGAAGTCAAAATCAGTTATGATGAGAAACTTATGTGAGTAGCTTCTGGTGGT GTCAGAATTGATTTTGCTGATTCAAACATGCTATTTAAATATTTAGGGCCAATCTGAGACCATACACCTGTTGTTGACCA AATATGAAAAGATCATGTGCCATACCAAAAATGTGTGTGAGAATTAATTTCCAAAAATGTGTGTGACAGTTATGTACAAA AATGTGTGGCATTTGAGTTGAGGACAATTCTTGTATTGTAGCCACAACTAGTAAATATAAGACTAGAGAGACTAACTATT TCTTTATCTTTTGTTTTACTTTGGCCTTAGAATCTTTTGTTCCTTTATTGGTTTTAGGAATTTGGATGTATTAGGCGGGT CCGTTTAATGTGCACCATCTACTTGGATGGTGTACGCGTACTCCATAAAAATAACCTACTGCAGTGGGTTTTGCCGGTTG TATTTGAGTTTTTCGTATTTGCAAGGGAAGGACTTGTATATATTTTATGTGGGGTCCCTATACATATTATTAATTGAATA AGTTTGAGCTATACGGGAAATTCTTTTTTTACCCTCCAAACAAG
CDS sequence (LotjaGi6g1v0230200.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACCCTTGCAAGAAGCCTTCCAGGCATTGAAAAGATGGAAAAACTGCCGCATAAGGCAGTGCCATTGCTGTCTCTTCC TGAGCTTGATGTTGCTGCAACTAAACTTCAGAAAGTCTACAAGAGTTACCGAACTCGAAGAAACCTTGCAGATTGTGCTG TTGTGGTGGAGGAGCTCTGGTGGAAAGCATTGGATTTTGCTTCTCTTGAATGGAGCTCTGTTTCATTCTTTGATGTGGAT AAACAAGAAACTTCGGGGTCACGGTGGGCAAGGGCAAGGACAAGAGCAGCTAAGGTTGGAAAAGGTTTGTTCCAGGATGA AAAGGCACAGAAATTAGCCCTCCAACATTGGCTTGAAGCTATTGACCCGCGACACCGCTATGGACACAATTTGCACCTGT ATTATGATGTCTGGTTTAAAAGCCAAAGCACACAACCATTTTTCTACTGGTTGGATGTTGGAGCTGTTAAAGAAATAAAT CTAGAGGAATGCCCAAGAGCCACCCTACAACGCGAGTGCATTAAATATCTTGGACCAAAAGAAAGGGAAGAATATGAAGT AATTGTTGAAAGTGGGAAGCTGGTGTACAGTCAGAGTGGGAGGCTTGTGGAAACTGATGGAATATCCAAATGGATATTTG TTCTCAGCACCACAAGGGCCTTGTATGTGGGGAGGAAGCAAAAGGGTGCATTTCAGCACTCAAGCTTTCTTGCCGGTGCT GCAATAACAGCCGCAGGAAGATTAGTGGCTCACGAGGGTGTGCTTGAGGCTATTTGGCCTTATAGTGGTCACTATCACCC AACAGAAGAGAACTTTCGAGAATTCATAAACTTTCTTGAGGTCCATAATGTAGACCTCTCTAATGTCAAGAGATGTGATG TAGATGATGATGCTCCGTCATATGTGGGGACAGATTCATTCACAGCCGCTACTGAATCACAAGAAATCAAGGGTCCTATT ATTAATGCTAGTGATATCAATAATGCAATTGTTCATGAAGAGGTTAAGGTCAAGAAGGTTGAGGCACCACTTGCATTTGA TTTCTCAAAGAGGTTGTCACGCAAGTGGGCCACTGGTGCTGGAGCCCGTATTGGATGTCTCCGTGACTATCCTGAACATC TTCAATCAATAGCATTGGAGCAAGTTAATTTGCTCCCAAAGCCTGCAGCTGCACAAACATGTAGTTATGGTCCAATCCCG GCTCCAAGACCAATCCCAAAAGTTAGAGTTTCTCCTAAGCTTGCATACATGGGATTACCTATCCCAAGAACCCCAATTCC TGCTGCAAGTTAG
Protein sequence (LotjaGi6g1v0230200.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTLARSLPGIEKMEKLPHKAVPLLSLPELDVAATKLQKVYKSYRTRRNLADCAVVVEELWWKALDFASLEWSSVSFFDVD KQETSGSRWARARTRAAKVGKGLFQDEKAQKLALQHWLEAIDPRHRYGHNLHLYYDVWFKSQSTQPFFYWLDVGAVKEIN LEECPRATLQRECIKYLGPKEREEYEVIVESGKLVYSQSGRLVETDGISKWIFVLSTTRALYVGRKQKGAFQHSSFLAGA AITAAGRLVAHEGVLEAIWPYSGHYHPTEENFREFINFLEVHNVDLSNVKRCDVDDDAPSYVGTDSFTAATESQEIKGPI INASDINNAIVHEEVKVKKVEAPLAFDFSKRLSRKWATGAGARIGCLRDYPEHLQSIALEQVNLLPKPAAAQTCSYGPIP APRPIPKVRVSPKLAYMGLPIPRTPIPAAS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 26 | 425 | 400 | 5.0E-210 | – | |
| PANTHER | 26 | 425 | 400 | 5.0E-210 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi6g1v0230200.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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