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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0230200 |
| Transcript ID | LotjaGi6g1v0230200.5 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Calmodulin-binding family protein; TAIR: AT4G33050.3 calmodulin-binding family protein; Swiss-Prot: sp|O82645|IQM1_ARATH IQ domain-containing protein IQM1; TrEMBL-Plants: tr|G7IQ65|G7IQ65_MEDTR Calmodulin-binding family protein; Found in the gene: LotjaGi6g1v0230200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:53904547..53909607) extracted from Lotus japonicus Gifu genome v1.2.
GTAGACTTGACTTTGGAAAATGAAAAAAAGTGAACTTGGAACATTATAAACAACCCACCATTAATTTCTACATTGGAACG TGTTGTGCAGTTTCGCTGTGGAATTCAAAGACTAGCCAATTTTCTCATCTTTACCAATATAAAAGAAGCCACTGACTCTG ATGTAGATTCATATTCTTTTCTTCTTTCACATTCACTTCTTGGAATCATATTCATATTCATATTCATATTCATATTCATA TTCATATTCATATTCATATACCTGACAAAAAAATAGAAGAGGGTTGTTTTCTTCAAACAATTTAAAGTTGAGGATCTTCA GCTCTATGGGATTATCACTTTCCTTATTGGTATCAGCCTGGGAAGAAATTGTGAGGCATTCACTCTTTACTTTGTCTTCC AAAATCAGCTTTGGTTCCAAAGATGGAGCTGCAATTTTGAGATCAGCAGCTGGGAGCTTTAAGAAAAGGGAATCAGAAAA TTCAAGCAGGTTGGAGTTTCATAGACCTGAACATGTGACCCTTGAAAGAAGCTTTTCAATCATGGAAAAACAGCAGCGTA AGGCAGTGCCTTTGCTATCTCTTCCTGATGCTGTGGTTTTCTCTTCTCCAAGACCAGTCAGTGAGCTTGATGCTGCTGCA ACTAAGCTTCAGAAAGTCTACAAGAGTTACCGAACTCGAAGAAACCTTGCAGATTGTGCTGTTGTGGTGGAGGAGCTCTG GTTAGTCTTAATCAATAGCAATAATTCAGAATTTGCTATGTAGAATTGTACATGATTAACCTTCTGTTATGTTATATGTT TTATTAATTGATGTTTTATTTTCTTCTAGGTGGAAGGCATTGGATTTTGCTGCTCTTAAACGGAGCTCTGTCTCATTCTT TGATGTCCATAAACAAGAAACTGCGGTGTCGCGGTGGGCAAGGGCAAGAACAAGAGCAGCTAAGGTATATTCCATTCTAA TATTTCAGTTTTTTATAAATGAAACGTATAGCATGTTTAGATCAGTTTACTTTTGCTCGGAATCAATTCAAAATTTTTGG CTTTAGAATCAATCGTAGAAGAATTTCCAAACATGATATACCCTCATTCATTTTCTCATTCATGTTGTATTATTTGGGGT ATTGACATTGCTAACTTTCTCATATGCAGGTTGGAAAAGGTTTATCCAAGGATGATAAGGCACAAAAATTAGCCCTCCAA CATTGGCTAGAAGCTGTAAGTTATACTAATCATCCATTAATTCCAATATTAACTCTATTTAGCCTTCAAATCATATTAGT ACCCTTTTGTTTATGGTTTATTCTCATGTTAACAATGTTCAATCCTTCTTGTTTTCTGCACAGATTGACCCACGTCACCG CTATGGACACAATTTGCACTTCTATTATGATATTTGGTTTGCAAGCCAAAGCACACAACCATTTTTCTACTGGTAATTAA ACTCTTTCTCTAGAATATCTAATAACCTATATCTTTTTGTTGACTCTATTTACCATGAACCTGGTAAAAGCTATAGAAGC TAAGGATCTGAATGGTTCTTATTAATTGCAGGTTGGATGTTGGAGATGGTAAAGAAATTAATCTAGAGAAATGCCCAAGG GCCACCCTAACACGCCAGTGCATTAAATATCTTGGACCAGTAAGTTATCACTGGACAATCATACATTTGTAATCACAATA TACATATGAACTTGTCTCATGGCTAATCTAATGTGTATCTTAATTGTTATTATTGCAGAATGAAAGGGAAGAATATCAAG TAACTGTTGAAAATGGGAAGCTGGTGTACAAACAGAATGGGGAGCTTGTGGACACTGATGAAAAGTCCAAATGGATATTT GTTCTCAGCACCACAAGATCCTTGTATGTGGGGAGGAAGCAAAAGGGTGTATTTCAGCACTCTAGCTTTCTATCTGGGGC TGCAACAACTGCTGCTGGCAGATTAGTGGCCCATAAGGGCGAGCTTGAGGTATAACCTTTATGACAACTTTCGTAGCATT TTCGATCAACTTTTATTTTCTCAGAATCAATACTCACATCCATAAGTTAGTCAAAGATTCTCCCCGTAATTGATTTTGTT TTTATAATCACTTAGAAGAATTTCCAAATACGCACTTAATATTGTATCATATAGAAATCACTTTTGCACTAGCAATTTCT CTAACACATTATTGTATGAACTTTGCAGGCTATTTGGCCTTACAGTGGCCACTATCACCCAACTGAAGAGAACTTCAGAG AATTTATAAGCTTTCTTGAGGAGCATAAAGTAGACCTCTCTAATGTCAAGGTAAATATTTTATGCAATTGATGTTAGTGA ACCAAAAAAGTTGGTTGTGGATTAAATTAGTTAATGATGGCCTTTTTTGCTTGTTTTCTTGCAGAGATGTTCTATAGATG ATGATGCTATTTCATATGTGGGGACAAGTTCATTTATTGGCACTAATCAATCACAACAAAACAAGGGTCCCTCTATATCT TTGCCATCAGGCCCTACAACTTCCATTAATGTCAACATCATGGGCAAGGAGACCAATAATGCAAGTGTTCATGAAGAGGT TAAGGCCAAGAAGGTTGAAACAGTACCAGTTGCATTTGATTTCTCCAAGAGGTTATCTTGCAAGTGGTCAACTGGTGCTG GACCCCGTATTGGGTGTGTCCGTGACTATCCTGAACATCTTCAATCAAGAGCATTGGAGCAAGTTAACTTGTCCCCAAGG CCTGCTTCTGCAAGACCATATAGTTATGGTCCAATCCCTTCTCCAAGACCAAGCCCAAAAGTCAGGATTTCTCCCAGGCT TGCATACATGGGCCTGCCTAGCCCAAGAACCCCAATTTCTGCTGCAAGTTGAGCTCCACAGTCGATTCTAAAGTCAGAAT CAATTCTACTGACAAACAAGCTTCTCTAAGTGACTTCTGGGTGCGTGAATTGATTTTGACGAACAATAAGCTAGCTGATT CAGAAATTTGTGACCATAGATATTTTATTGACCAAAAATAAAAAGAGCACATACTTGTCCCTAGTTACCAAAAATATATC AGCCAAGGTGACATATAAGTTGAGGACAGTTCTTCTAGCCACAACTAGTAAATTATAAATATGAGGAGAGACAAGGCAAC TAGTACATATGAGACCATATAGACTAACTATTCTTTATCTCTTGTTTTTATTTGGTCTTAGAATTTTCTGTTCCTTTATT CTTTTAGGAATTTGGATGTACAAGGCTTCTGTGAGGCACATTGTGTCCTCCACCTAATTTGTCTCTCTCTTGTATTTTTT GGAAGGCGGCGATTCAGTTAATTCTTTTATGTAACTACAGTACAATTTTTTAGTTACACGTGATAATAACAATTCTTGTT CTGCATTTCACATTTTACATTGATTTTCTTGTTCCAATATATAATTTTACAAAATGTATATTGTTTTTTTATGATCGGTT TAAATCAAGAAAAGGATGCGTGATTGGGTCAATGTTAAGGGATTATCTGTGTACAATTTTGATGTCATATAGTAATAAGA TTATGTGTATCATGAATTGAATCACTCCATCCACTTGTTTTTTATTTGAAAAATTTATTTATAATCCCTATATTATTGGA TGACAATATATTATTTTTATGCATGCCATCAACATTCAACAGAGTACCATGCAGGTTGGGTTGTTTGTATTTCTTGGTCC ATCAATGTACTAGTGTTGTATACGGTTTGATATGAGAATCTTAGAATATTCTTTTATTGGATGGTTAAGATTGAATGATG ATAAAAAGGATAAAAAATGTAAATTTATAACCCCCACCTCATCTTCTCTAACCCACCCTGTTCATCATCTTTCCCAACCC ACCATTGTCACCTGAAAACCGCCGGCGGAGTCACCGCCGATGGTTGTTACACACGCTTTGCGGCACGCCTGCTTACGTGG CACCGAAGATTCTGGGGAAGAGAGGTTACAACGGTGCTAAGGTGGACGTGTGGTGTGATTATCTTAGTTCTCGTCACTAT GGATGGGATTGTGAACGAGCCTTGGTTTCGGAAGGGGTACAAGGAGGTGAAGTTTCATGTGAAGGAGGATTTGGGAGAGA AGGTGGAGGAGGAGAAGGTCGGCGGCGAACGGAGCTAATTTTCAGATCTGGGTGAAGAAAGATTGAATCTTTAATAGATA AAACTCAAATCTAGAAACAACAAAAAAGAGAACAACACCTCAGCCGATTCACTTGTAAAAGTAGGTTGCAACAGATCTTC AAATTTGTGGTGGCACTCAGATGGGGTTCATTGATCTTTTGATGTTTACTGAAGTTGTTCCTGCTGTTAACGCTTCTCTT GTCTGGTGGCCTCTCCTACTTTTACTCCATTCTGTTTCTGTAGTTCTATTGCTTTGCTTTGCTTTTGTTTTTTGTTATAC TCAAGTTGGGTTTCTTAAACTTTATTTGAGTTTGGACTAATTATGTTCCAAGACTGAAGGGAAGTTTAATTAACCAGCAT ATGACTTAGTAATGTGTTGAGAAAAAGTTAATAGTTAATACGAATTGTCAACATAACATTTGTGAGTAAAGGGTGACAAT TTTAAATTGCTCTTTCGATCATGATGTGATGTGATGTGAATATAGTAAATGTTAAAGGTCTCTTAAAGTGTGTGACTTTT AAAAATTGAGCTTTTGACTTAGGGTTTCTAACTTTAAACAACCACTTTTTACCACTACGACCAGCAACGCACAAACAAAA TGAATGATTAAGTGACAACTTTGAGGAAAAATAATATGTTGAGCATATTCATTTGGTATGACCTAACCTGGAAAACTTGA AACCCAAAATATGCATGCGGGTGGGTATAGGTGCGTGTAAACAGGCCATACATTTAGTACTTTAATTTTTTCACCCATCA TGGCCAAAATAGTATATAATATAGGATTTTCATGAATTGACTAAAACTCAATCTAGTGAGCTTCGACTTGAGTTGTGTCA CAAGAGTTCTCAATCTATGAAGGATTATCTAAAGCCAATCAAGTTTGTTATGAAAACTTTGTTCACTTTCAGTGCTCTGA TCTCAATCTATGATCATATGG
CDS sequence (LotjaGi6g1v0230200.5) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGATTATCACTTTCCTTATTGGTATCAGCCTGGGAAGAAATTGTGAGGCATTCACTCTTTACTTTGTCTTCCAAAAT CAGCTTTGGTTCCAAAGATGGAGCTGCAATTTTGAGATCAGCAGCTGGGAGCTTTAAGAAAAGGGAATCAGAAAATTCAA GCAGGTTGGAGTTTCATAGACCTGAACATGTGACCCTTGAAAGAAGCTTTTCAATCATGGAAAAACAGCAGCGTAAGGCA GTGCCTTTGCTATCTCTTCCTGATGCTGTGGTTTTCTCTTCTCCAAGACCAGTCAGTGAGCTTGATGCTGCTGCAACTAA GCTTCAGAAAGTCTACAAGAGTTACCGAACTCGAAGAAACCTTGCAGATTGTGCTGTTGTGGTGGAGGAGCTCTGGTGGA AGGCATTGGATTTTGCTGCTCTTAAACGGAGCTCTGTCTCATTCTTTGATGTCCATAAACAAGAAACTGCGGTGTCGCGG TGGGCAAGGGCAAGAACAAGAGCAGCTAAGGTTGGAAAAGGTTTATCCAAGGATGATAAGGCACAAAAATTAGCCCTCCA ACATTGGCTAGAAGCTATTGACCCACGTCACCGCTATGGACACAATTTGCACTTCTATTATGATATTTGGTTTGCAAGCC AAAGCACACAACCATTTTTCTACTGGTTGGATGTTGGAGATGGTAAAGAAATTAATCTAGAGAAATGCCCAAGGGCCACC CTAACACGCCAGTGCATTAAATATCTTGGACCAAATGAAAGGGAAGAATATCAAGTAACTGTTGAAAATGGGAAGCTGGT GTACAAACAGAATGGGGAGCTTGTGGACACTGATGAAAAGTCCAAATGGATATTTGTTCTCAGCACCACAAGATCCTTGT ATGTGGGGAGGAAGCAAAAGGGTGTATTTCAGCACTCTAGCTTTCTATCTGGGGCTGCAACAACTGCTGCTGGCAGATTA GTGGCCCATAAGGGCGAGCTTGAGGCTATTTGGCCTTACAGTGGCCACTATCACCCAACTGAAGAGAACTTCAGAGAATT TATAAGCTTTCTTGAGGAGCATAAAGTAGACCTCTCTAATGTCAAGAGATGTTCTATAGATGATGATGCTATTTCATATG TGGGGACAAGTTCATTTATTGGCACTAATCAATCACAACAAAACAAGGGTCCCTCTATATCTTTGCCATCAGGCCCTACA ACTTCCATTAATGTCAACATCATGGGCAAGGAGACCAATAATGCAAGTGTTCATGAAGAGGTTAAGGCCAAGAAGGTTGA AACAGTACCAGTTGCATTTGATTTCTCCAAGAGGTTATCTTGCAAGTGGTCAACTGGTGCTGGACCCCGTATTGGGTGTG TCCGTGACTATCCTGAACATCTTCAATCAAGAGCATTGGAGCAAGTTAACTTGTCCCCAAGGCCTGCTTCTGCAAGACCA TATAGTTATGGTCCAATCCCTTCTCCAAGACCAAGCCCAAAAGTCAGGATTTCTCCCAGGCTTGCATACATGGGCCTGCC TAGCCCAAGAACCCCAATTTCTGCTGCAAGTTGA
Protein sequence (LotjaGi6g1v0230200.5) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGLSLSLLVSAWEEIVRHSLFTLSSKISFGSKDGAAILRSAAGSFKKRESENSSRLEFHRPEHVTLERSFSIMEKQQRKA VPLLSLPDAVVFSSPRPVSELDAAATKLQKVYKSYRTRRNLADCAVVVEELWWKALDFAALKRSSVSFFDVHKQETAVSR WARARTRAAKVGKGLSKDDKAQKLALQHWLEAIDPRHRYGHNLHFYYDIWFASQSTQPFFYWLDVGDGKEINLEKCPRAT LTRQCIKYLGPNEREEYQVTVENGKLVYKQNGELVDTDEKSKWIFVLSTTRSLYVGRKQKGVFQHSSFLSGAATTAAGRL VAHKGELEAIWPYSGHYHPTEENFREFISFLEEHKVDLSNVKRCSIDDDAISYVGTSSFIGTNQSQQNKGPSISLPSGPT TSINVNIMGKETNNASVHEEVKAKKVETVPVAFDFSKRLSCKWSTGAGPRIGCVRDYPEHLQSRALEQVNLSPRPASARP YSYGPIPSPRPSPKVRISPRLAYMGLPSPRTPISAAS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 514 | 514 | 8.5E-245 | – | |
| PANTHER | 1 | 514 | 514 | 8.5E-245 | – | |
| MobiDBLite | 470 | 496 | 27 | - | – | |
| MobiDBLite | 480 | 494 | 15 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi6g1v0230200.5, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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