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Field | Value |
---|---|
Gene ID | LotjaGi6g1v0239600 |
Transcript ID | LotjaGi6g1v0239600.1 |
Lotus japonicus genome version | Gifu v1.2 |
Description | DUF630 family protein (DUF630 and DUF632); TAIR: AT2G19090.1 DUF630 family protein (DUF630 and DUF632); Swiss-Prot: sp|Q8T5T1|MDN1_GIAIN Midasin; TrEMBL-Plants: tr|K7MBS2|K7MBS2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0239600 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:55070894..55075788) extracted from Lotus japonicus Gifu genome v1.2.
AATTTTGTCTCTTTTTTTTTGTGTTATGTGTTTTTTTTAATGTGTGTTGTTTTTTTCCTCCTTGTGTTTTGACCGTTGCT TTTTTTCTCTTTCTCTCTTCACACACAACCCTTTCTTTCTCACTGATTCCTTCTCCACTGTCCTTGATCAAAAGCACCCT CTTGTTCCATAACACCATTGTCAGGTATGGTTCTTCATTCTAAGCTTCAACTCTGAATAATACTTGTTGTTAACCATATT TATCATTTTGTTTCTTCTTTTGGCATTCTCTCCTTCATTTTCTCCAACTATCAGTTGTACAAACATAAATACTTGGTTTG GTTCTTAAAAGTAAGATATTGAGTAAAGGGGTGTGATGGAAATTTTTTGTCTTCCTCAAAATGGGTACTTTGTTTCTATG TTTAGCAGCTCAGTTCTGATTCTTCTTGAACATTTTCCTCACTTTTATCTGGTTTTTTTTTTCAGTACAACCACTTCAAT TTCTTGCTCTTTAGATTTTCCTAAACTTATATTGATCTGTTTTACACATTCTTAGCAATGTATCTCTTGATGTTTCTTTA TATTAACATGTATGTATGTGTTTAGTTTGTGGCATCCTTTCCTTTTATTATCATTTCTTTTTTCTTCCGAGACTTTAGTT GAATTATTTCCTCTTTTTTTGCCTAAAAAATTTTCCCAAATTCCTCTTTCCTCATGTATTCTGGTAGAGCATAGTTTGGT TTTTCTGGAAATCATAGAGGAAAAGCTTAGAAAGTTTTCCATTATTTGCTTCTGTTAAGCATTTCTGAATTCTCATTACC CTTCTTCTGGCTTGGAAACAAAGAGAAGTATCTAAATGCATCAACATTGTATAATATTGAATTTTTATTTCTATATTTGG TCTCATGTTTGGTGGAATTTTAGCAATACACTGAATTTTTCTATTTTTGGTGACAGATTTGTGATTCCTGTATGAATCTG GTGAGATATAAAGAAGGATTCTCCTTTGATTTCCATGCCAGTTCACGGTTGAGATATTCTTAAGGGAGCAAGAGATGGGA TGTTCACACTCAAAGCTGGAAGATGAAGAATCAGTTCAGCTTTGTAAAGATAGAAAGAAGTTCATCAAGCAGGCTGTTGA GCAAAGAACTCGATTCGCGACCGGACACATGGCCTACATTGAATCTCTGAGTAGGGTTTCAGCAGCTCTTCGTGATTACA TCGAGGGAGACGAGCCTCGCGAGTTCTCATTAGACTCGGTCATGAACCCGCCTTTCACACCTGTGAAGAAAACTGGCCCA GGCTTCATTCCCATCTCAGCAAAATCCTTCACACCTTCATCAACAATTGAGTTTGGAGTTGGACCAAATTCCACTTTGAA AGTGAATTACCTTAGGCCAGGTGGTAATCCAGCAATTTCGGTTGAGGAAAGGCCTCAGTCTCCTGAGATGATGAGGGTTG AATCATATTCTCCGATGCGGCATTATGGCATGGATGGTTTTTTTGCTATGCAACCCCCACCTGGGAACCCTTCAATTTTT GCTTACTCTCCCAATAATAGGCCTAGTATCCCTCCCCCTTCACCTCAAACTTCTCAATGGGACTTCTTTTGGAACCCATT TTCATCATTGGACAACTATGGTTACCCTACCCGAAGCAGCCTTGATCAGACCGCTATGGATGATGAGTACAGAGGACTGA GGCAGGTCCGAGAAGAGGAGGGAATACCAGACTTGGAAGAAGATGAAACTGAACAAGAAGTTTATGTTAGGAAAAGAAAA GTAGCAGAAGAAAGAACCAGACCTGATATGCATTCCTCCAAAGAACAAGTCATTGTTGAAGATGTTGATGAGGATGAGGA TGAGGATGATGATGATCATGATCATGACGAACATGATGTTGATGATGACGATGATGATGATGATGATGAGGAAGAGGACG AGGACGAGGACGAGGATGAGGAAGAGGAGGGAACAAATACTGAAGCTGAGCATGATGCCACAGGTTCGCAGGCCCATGGT AGTTCTAGTTTTGAAGTATCAAAATCTCAAGCTGCTGGTCATATTAAGTCCAGACATCGCGAAATGGCAATCGGTAAACA AGAAGCTAAGGAAGAAGCACCAGGTTTTACTGTTTATGTAAACCGAAGGCCAACAAGCATGGCGGAAGTTATCAATGATC TTGAAGCTCAATTCACAACTGTCTGCAATGCAGCCAATGATGTCTCAGCATTGTTAGAGGCCAAGAAAGCGCAGTACTTA TTGCCACCTAATGAACTTTCAGGTTTGATTGAGATATTCAATATATAATTTGATTTTGTTTTAAGTGTGCTTTCATGTTC ATGCATTCTATTATGAGCTTAACTCCTTATGAATAGGGGAACAAATTAATTAGCAGTCTCAAATTTGATAATAAACCCCA ATCAAAAGTTTGTTTATGGAGGGGGGATTACCATATAGAAAATATGCATGTTATGTATCCAGAAATCATCTTTTTCTTAT TCACAACTCCTCATTTAAATCTAGTAAATCTTTTTTTTTCACTCATTGGCATACCTATCTGTAAATTTTCAGGAATATGA ATTTGAATTATATTTCATTTGCAGCATCGAAGTTGCTAAACCCGGTAGCTCTGTTCCGGTCAGCTTCTTCACGGTCTACT TCATCAAGATTTTTAATGAATTGTACTAGCACTATAGAGGAAGGTTGTGAGGGCACTAAAAATATCACAGAGGAACATTG TATGGTTTCCGGTAGTCACCAAACCACATTGGACAGATTAAATGCATGGGAGAAGAAGCTGTATGAGGAAGTCAAGGTAT ATTATCAACTTTCTATCCATGATGAAGTCAAAGCTTTCTGAAAATATTTGAATAAACTTCTCTGTCCTGAAATTCTTAGA TACATATAATTGTTATTTGAAAAATAGCCTAGAAAACTGGCACTCATAACTGTTCCCGCTTGCCACCAGTTCAAAAAACT TTCTCTAGGCCCTTGGGTTTTTTTCTCAATTATGTATGTAAGATTCTTGGTAGACAATTCTTCGTAATCATAGATCCTTA GTGGATGAAGATAATGATTCACTGATGTTATGTACTCATCAATTACATATAAGCTGTTGAAATTCATTCAGTTATTGTAC TTGTTTATGAGTAAACATGAAATGGGTCCAACTTCAACATAATGTGAAAATTCACAATGCCTCTAACTTAGTATAAACCT TTCAGTTAGATGTTTAACAGGATTGGGAAAAGCCACTGACTGAGGTCAACTTCAACTGCTTATTTTTTGTTCAGTCATTT TTCAGTTGGTCTCTCATTTAAAAAAAAAATAGATTATCTATTATTGTTACAGGTCAATATGCTTATGATCACAGACAATT TTATTTTAATATTGGGAAACTTATCAGTTACTGAGTCCACTCTCTTCTTCAACAGTCTGGAGAACGTGTCCGAATTGCAT ATGAGAAAAAATGCAAGCAGCTAAGGAACCATGAAGTAAAAGGAGATGACCCCTCTTCTGCAGATAAAACAAGAGCAGCC ATTAGGGATCTAGATACCAAGATAACAGTTTCAATACACTCAGTTGAAGCTATTTGCAGGAGAATTGAAACTCTAAGGGA TGAAGAGTTGCATCCCCAACTTCTTGAATTGGTGCAAGGGTATGTATGAAAGTCATTATGATTATCCCCATATGTCTTAG TTTTCTAGATGAACAAAACCATTTTGTCTGTCAAACTTTGAAGTATTTTTAGATTTCAAACATACCTTAAGGACCGTTTT CTATACAGAAACTTTCCTAACTAAAAGAAATATTGGATTGCATTTAATAGCATTTATATGATTCTTGTTGATCCTTCAAT TATACAAATGACAGGCTGGAAAAGATGTGGAAAGTAATGGCAGAATGTCATCAGACACAGAAGAGAACCTTAGATGAAGC TAAGGTTCTTCTAGCTGGCACTCCTTCAAAATCACATGCCAGAAAACACTCTTCCATGTCAATGACTGATCCAAATAGAC TCGCACGTTCAGCCTCGAATCTCGAATTTGAGTTAAGGAACTGGCGAAACACCTTCGAGTCTTGGATCACTTCTCAAAGA TCCTATGCTCATGCACTAACCGGATGGCTTCTCCGGTGTGTGAGATCTGAGTCTAATGATGTATCGAAGCTACCATGCTC TCCGCATAGATCCAGTGGCACCCACCCTTTATTTGGACTCTGTGTTCAGTGGTCAAGGCACCTAGACGCCATACATGAGA AGGCAGTGCTTGATGGCTTGGATTTTTTTGCAGCTGGAATGGGGTCCCTCTATGCACATCAATTGAGACAAGATTCTAGG CCAAGACAAACCAATGGGGGCATGGAAATGGTGGAGTTTGGTCAGGTGGAAGAGGAGGTAATGGCACCGGAAAAACTGGC TGAGGTTGCTATTAAGGTACTTTGTGCTGGAATGTCTGTTGCTATGAGCTCATTGGCAGAGTTTGCTTTTGATTCTGCTG AGGGATACAGTGAAGTTATTAAGCAGTGGGAGAATGTGAAATCTCAAAATACTTCTAGTGAGACATAGAACATAGATGAT GTCTCACATTTTGTTCACTTAGTTCATTAGTTTAGGCTTGTTTAGCAACGGGTGTCCCTCAATGTAATTATGTATTTAAC TAATCAATATAGAGGTAGAATAGCAAGGGGAATAGCACCCTTTATTGTTCAAATGGACTTTTTTTCACTACTAAATCCTC CATTTCTGGAAACCACTTTGGTTCCTGCTAAATGGATTCATTTAATCAGAAGTTTAGAAGATAGACTACTGCATTTCAAG GCTGAAAAGATGTTAATCTAATTATACCAGAAAACTACACTCTACTAAAATTGTTTTGCACCGTTAGCCTTAATCCACTA TATGAATGATCTCTG
CDS sequence (LotjaGi6g1v0239600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGATGTTCACACTCAAAGCTGGAAGATGAAGAATCAGTTCAGCTTTGTAAAGATAGAAAGAAGTTCATCAAGCAGGC TGTTGAGCAAAGAACTCGATTCGCGACCGGACACATGGCCTACATTGAATCTCTGAGTAGGGTTTCAGCAGCTCTTCGTG ATTACATCGAGGGAGACGAGCCTCGCGAGTTCTCATTAGACTCGGTCATGAACCCGCCTTTCACACCTGTGAAGAAAACT GGCCCAGGCTTCATTCCCATCTCAGCAAAATCCTTCACACCTTCATCAACAATTGAGTTTGGAGTTGGACCAAATTCCAC TTTGAAAGTGAATTACCTTAGGCCAGGTGGTAATCCAGCAATTTCGGTTGAGGAAAGGCCTCAGTCTCCTGAGATGATGA GGGTTGAATCATATTCTCCGATGCGGCATTATGGCATGGATGGTTTTTTTGCTATGCAACCCCCACCTGGGAACCCTTCA ATTTTTGCTTACTCTCCCAATAATAGGCCTAGTATCCCTCCCCCTTCACCTCAAACTTCTCAATGGGACTTCTTTTGGAA CCCATTTTCATCATTGGACAACTATGGTTACCCTACCCGAAGCAGCCTTGATCAGACCGCTATGGATGATGAGTACAGAG GACTGAGGCAGGTCCGAGAAGAGGAGGGAATACCAGACTTGGAAGAAGATGAAACTGAACAAGAAGTTTATGTTAGGAAA AGAAAAGTAGCAGAAGAAAGAACCAGACCTGATATGCATTCCTCCAAAGAACAAGTCATTGTTGAAGATGTTGATGAGGA TGAGGATGAGGATGATGATGATCATGATCATGACGAACATGATGTTGATGATGACGATGATGATGATGATGATGAGGAAG AGGACGAGGACGAGGACGAGGATGAGGAAGAGGAGGGAACAAATACTGAAGCTGAGCATGATGCCACAGGTTCGCAGGCC CATGGTAGTTCTAGTTTTGAAGTATCAAAATCTCAAGCTGCTGGTCATATTAAGTCCAGACATCGCGAAATGGCAATCGG TAAACAAGAAGCTAAGGAAGAAGCACCAGGTTTTACTGTTTATGTAAACCGAAGGCCAACAAGCATGGCGGAAGTTATCA ATGATCTTGAAGCTCAATTCACAACTGTCTGCAATGCAGCCAATGATGTCTCAGCATTGTTAGAGGCCAAGAAAGCGCAG TACTTATTGCCACCTAATGAACTTTCAGCATCGAAGTTGCTAAACCCGGTAGCTCTGTTCCGGTCAGCTTCTTCACGGTC TACTTCATCAAGATTTTTAATGAATTGTACTAGCACTATAGAGGAAGGTTGTGAGGGCACTAAAAATATCACAGAGGAAC ATTGTATGGTTTCCGGTAGTCACCAAACCACATTGGACAGATTAAATGCATGGGAGAAGAAGCTGTATGAGGAAGTCAAG TCTGGAGAACGTGTCCGAATTGCATATGAGAAAAAATGCAAGCAGCTAAGGAACCATGAAGTAAAAGGAGATGACCCCTC TTCTGCAGATAAAACAAGAGCAGCCATTAGGGATCTAGATACCAAGATAACAGTTTCAATACACTCAGTTGAAGCTATTT GCAGGAGAATTGAAACTCTAAGGGATGAAGAGTTGCATCCCCAACTTCTTGAATTGGTGCAAGGGCTGGAAAAGATGTGG AAAGTAATGGCAGAATGTCATCAGACACAGAAGAGAACCTTAGATGAAGCTAAGGTTCTTCTAGCTGGCACTCCTTCAAA ATCACATGCCAGAAAACACTCTTCCATGTCAATGACTGATCCAAATAGACTCGCACGTTCAGCCTCGAATCTCGAATTTG AGTTAAGGAACTGGCGAAACACCTTCGAGTCTTGGATCACTTCTCAAAGATCCTATGCTCATGCACTAACCGGATGGCTT CTCCGGTGTGTGAGATCTGAGTCTAATGATGTATCGAAGCTACCATGCTCTCCGCATAGATCCAGTGGCACCCACCCTTT ATTTGGACTCTGTGTTCAGTGGTCAAGGCACCTAGACGCCATACATGAGAAGGCAGTGCTTGATGGCTTGGATTTTTTTG CAGCTGGAATGGGGTCCCTCTATGCACATCAATTGAGACAAGATTCTAGGCCAAGACAAACCAATGGGGGCATGGAAATG GTGGAGTTTGGTCAGGTGGAAGAGGAGGTAATGGCACCGGAAAAACTGGCTGAGGTTGCTATTAAGGTACTTTGTGCTGG AATGTCTGTTGCTATGAGCTCATTGGCAGAGTTTGCTTTTGATTCTGCTGAGGGATACAGTGAAGTTATTAAGCAGTGGG AGAATGTGAAATCTCAAAATACTTCTAGTGAGACATAG
Protein sequence (LotjaGi6g1v0239600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGCSHSKLEDEESVQLCKDRKKFIKQAVEQRTRFATGHMAYIESLSRVSAALRDYIEGDEPREFSLDSVMNPPFTPVKKT GPGFIPISAKSFTPSSTIEFGVGPNSTLKVNYLRPGGNPAISVEERPQSPEMMRVESYSPMRHYGMDGFFAMQPPPGNPS IFAYSPNNRPSIPPPSPQTSQWDFFWNPFSSLDNYGYPTRSSLDQTAMDDEYRGLRQVREEEGIPDLEEDETEQEVYVRK RKVAEERTRPDMHSSKEQVIVEDVDEDEDEDDDDHDHDEHDVDDDDDDDDDEEEDEDEDEDEEEEGTNTEAEHDATGSQA HGSSSFEVSKSQAAGHIKSRHREMAIGKQEAKEEAPGFTVYVNRRPTSMAEVINDLEAQFTTVCNAANDVSALLEAKKAQ YLLPPNELSASKLLNPVALFRSASSRSTSSRFLMNCTSTIEEGCEGTKNITEEHCMVSGSHQTTLDRLNAWEKKLYEEVK SGERVRIAYEKKCKQLRNHEVKGDDPSSADKTRAAIRDLDTKITVSIHSVEAICRRIETLRDEELHPQLLELVQGLEKMW KVMAECHQTQKRTLDEAKVLLAGTPSKSHARKHSSMSMTDPNRLARSASNLEFELRNWRNTFESWITSQRSYAHALTGWL LRCVRSESNDVSKLPCSPHRSSGTHPLFGLCVQWSRHLDAIHEKAVLDGLDFFAAGMGSLYAHQLRQDSRPRQTNGGMEM VEFGQVEEEVMAPEKLAEVAIKVLCAGMSVAMSSLAEFAFDSAEGYSEVIKQWENVKSQNTSSET
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
Pfam | 1 | 59 | 59 | 3.1E-25 | ||
PANTHER | 1 | 287 | 287 | 0.0 | – | |
PANTHER | 1 | 287 | 287 | 0.0 | – | |
MobiDBLite | 245 | 354 | 110 | - | – | |
MobiDBLite | 245 | 260 | 16 | - | – | |
MobiDBLite | 261 | 309 | 49 | - | – | |
PANTHER | 283 | 783 | 501 | 0.0 | – | |
PANTHER | 283 | 783 | 501 | 0.0 | – | |
MobiDBLite | 312 | 332 | 21 | - | – | |
MobiDBLite | 334 | 350 | 17 | - | – | |
Pfam | 369 | 697 | 329 | 1.5E-101 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi6g1v0239600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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