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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0240300 |
| Transcript ID | LotjaGi6g1v0240300.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | A-kinase anchor protein 9, putative isoform 1; TAIR: AT5G57340.1 ras guanine nucleotide exchange factor Q-like protein; Swiss-Prot: sp|Q8IYE1|CCD13_HUMAN Coiled-coil domain-containing protein 13; TrEMBL-Plants: tr|I3SEJ8|I3SEJ8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0240300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:55178809..55183347) extracted from Lotus japonicus Gifu genome v1.2.
CTCTCTCCCATCCTTTCCCACATTACAGTGAAGCACTACTATACAATATAAAAAAATCATTCGTCCTCAAAATTCACCTC CACCTTAGTAAGCACACAGAGATAAGAATAAAAGAAAGAGATATACGATAAGTGATATGGTAAGAAAAGAAAAGGAAGAA AAGGAAAGAAAATGAGTAAAAATGAGATGGAAATATGGAATAGATACACTGAGTTTGAAAATTAAAGTATATGTTAGTGA TATAAAATATTGATATTATAAGATATCTCTCTCTTTCTCTGAATATCACATAGGCACTCACACATATACAGACACATTGC TACTCCAGCTTTTTCTCTTGCCTCCTTCTCTCACAGCCTGTCAAGCCTGAATAATTAACTCCATCATTCCATTTTTAAAA ATTGAGGTGGTTGCTTTGTTGTGTCCAAGTTAAAGCTATTCATATTGCTGCTGTCTGTCTATGAGCTAGCTTTCTCCAAA TCCCCTCAGGTGTTGAAATTCTTAGTTTGATCCGTCCAACCATGATTCAAGGAGTACCATGATAGAAGAATTCGCCACTT GTTATATATTTAGTATTGGTTTTATTACTTGGACTCACCTATGGGAAGTATAAATGGTGGCATGAGGGAGGAAAATGTTC AATGAGCTTCATCACAGAAAGCTGCAATTTTGCTACATCTTACAACAGGTGAACTTTTGCATTAACTTTAACTAAAACAG GCATCATCTTCCCATGATAAGAGTTTTTTTCATTTTTTTCTTTTGATATGGAATCTCCAAACAAATAAGGTATTGCAGTT CACAGATTGAATGCTTATTAAGTATTCATCAACTGAGAAAGTTGAAGGCCCTTTCCTATAGTCTTGATTTCTCTGGAAAT GATGTTCATGTCCAAGAGTCCATCCACACACAGTGATGCATCAAAAAGTTGCAAGATTAACTTGAAAATAAAATTCTGTT GGCTTGCACATGTCATTGAAATTTAAACTCCCATGTGGCCATGTCTTAGTGAAGGGTTATATTTTGATTTTCTTGGATCT GTACTTGAGCTTCATTAGTATATAGTTTACTATTTTTCTTTAGAATAGCCAAAAAAAGTCCTTTTCATTGAGCCTTGCTT TATTATGAACAAGGAGAAATAAGAACTTTTGTGTGCCTTAGTTTCTAGTAGCAGTAGATGAAGACCACTCTTACTTATGG GCCTGATCTTATTGTTGGCTTAGTCAGTGATACTTTCATTCCAAATAGAAAGACCACATAAATGCTTGCATCAAGTGTTC ATTAACTCATGCTTCTTCAATGTGCCGGCAATATTTGATCATATTTTTGAACCTTTCAACACAAATTTTCTTTGACCTTT CCTTCTCCTACTTTTGGTTACTAAAATTTCCCCTGTTTTGACAAAATTACTCAAACAATTAACTAGTAGAGTTCTATATA TGACCTGAGCATATGCAACAAAAAAGGTGCCTACAAAATCTTGCAAGATAATTTTAGCATTTGGTATGAAGCTTGTTATG ACTGCTACTTTGGGATTTCATTCTATATGTGATTTCTTTAGTTTCTTCATTTTCAATGAAATTGATGGCAACCGAAATTG ATTATGGAATTAGTTATCACCCTCTCGATCATAAGTTAGTATTTCACCCTTTCTTGTTTCTGGTTGTGCAAAGTAAATCA ATAAAGAAGTAAAACAGACCAATATTAGCCACACCTTCACATGAACTCTATTAATTAACATTAGAAGCCTTTTTTTTCTT AATAGCTGATGCATTATTCAACTATGATGTGCTTTGAAGTTAAAGTCTTATGATAGTGAGGAAAAACTTAAACAAAGTAT TAATTTCTTTTCCAGGCATGGGAACCAAAATTGAATATTCCATAAATCCTCTAGCATACTCAGTAGACTGCAAAAACTTC ACTGTTGATGGTGTGGATGTTTGGGAGCATAATCTGAAGAAAGAACTTGCTTATAACAACAACCAGTGCAGTATTGGGAT GGATAAATTGCAAGTTTCCATGGATAAGATGCTTGACAGAAACAATATAGAGTCCATCAAAAAGACCATGCAGATGCATG AGGAAATCTTCAAACACCAGGTATGAATATGATGTCAATGTTGGATGCTTTATCACAATACCTTCTCATCATAAGACTCC AAAATTTAGGTTGCCATATTCAATTTGTACCAGAAATGTTAAACCTCATAGGGTAGATCAAATGTCTTATTAGTCTTCTT TGGTTGTAAACTCATATTACCATTCCATATTGAATGTGTTGGAATAACAAATGTTAGAGTAACACATTGGTTGAATTCAA GGAGTTGGGTTAAATGGTTTCAATCCAAGAAAGGAACTTCTCCTTTATGCCAAATACTCTTCCTAGGCCCCAACAGAATG AGAGGCTTTCTCGATAATTGGAGCCACTGTGCAAAAAATTGCTAGTAATGTGCAATCATTATACTTTGATGCTGATGTCA AAGTCAATATAAAAGATCCTTTATTCTGTGACATCTGCATCTATGACCATATATTTATCATTCTATACGCTTCATTGACT ATCTTTTTACAATTCCTAGCAGGCAAGATATTTAAAATTGGATCCGGCTTCCCTACCGTTAAATTTTCCTAAATTCACTT CAGTAACAGCTTCATAGATGCCTGGTCTCTTTAAATTTAAGTCGTCTGATCTTTTATCAAACAGTTACGGAGCAATGATT GCAGTGAATTTAGGAAAATCTAAATTTCATAGAATTATTATAGCCAATCTTTTTAGTACCTCTTATTATGTACCAATTAT ATTTTGATTTGTAGGTATGCAATAAGTTAACTGTTAAAAGTAGTTGGTAATTATGAGTATTTGGGATTTGTAGGTAAGGG AACTACACCGGGTATACAGTGTACAAAAGATGCTGATGGGTGAGCTCAAACAACATAAATTTTGGACCTCCATGAACAAC ATAGGTACAAACAATCCATATGTGGTTAAACAACAACAACAGCAAACAACACAAATTTCATATGGTACTGATTTCCATGT TGGAAGTTTGAGAGAGGATCTACATGTAAAGGAAGGGAGTGGAAGTTGTTCTGGAGAGAGGAACATAAAAAGGCAAAGAG ATTTTGATCTTGAAAGGCCTGCTGCTGAGAGAGACATTTTTGCAAGAGGCTGTGATGAAGGTGAGGCAGGACCAAGCTCC TACACTGCATTTCAGAGTTGCAAAATAAGCAATGATGATGAAGACATGGAAGTGGATTTGAGTTTAAGTATAGGAGGAAG GAGCAGCCATGTTAAGAAGAAAAAACCTTATCTGCTTCCATTGGGATTCTCAGGCTCATCACCCATAGGGAAAACTAGGG AGTTCAATTCTTCTATCTCTTTTCAATCAGATAATAAAGTGGGAGATTGCAGTGACCCCACCACCCCCATGAGCAGCTCC AGTGTTACATTTGATCAAGAAAAAAGGGGGCCACATTGGCTTTCTCAAGGCTTAAAGCTTAAATAGTAGTTTGACTTGTT TCATAGTATCTTAATATCTTTCCTCTCAAATCTACATGGACCACTGAGTTTATATGGTTCATGTGTTTGAGTTTTTTACT TTATTCCAATAAATGGATAACTTATACACCCATTTCTGAGTGACCCTTTCTGTAAATAGGCAGACCTAGTTTGAATTGCT TCTTAAATTACTTTAATGTCCAACAGATTATTTTCAAACCTAAATCTATTGTAAAGGAAGAACCTGGTACTGCTTGGTGC TTTATGTGAATTTAAGTATAAAAGGAAAGTCCATTCTCAAAAGAAGCTAGTATCTGCACTAACAAATTTTCAGTACAATT CAGAAAATATAGTTTACAATTGGTCAACTAATTGTTGCATGTGAGTAACCCAAGTACATTCCTAATGTCAAGGTGTTTGG TATACACTAACACATCACAGCTGAGCCCCTGGCATTCATACATGAAATGAATTCTTTGCCCTAGGCAACATCATGATGGA GGAACTCCCAGCTGCCATCATTCTTTGTCTGCAATTGCGGCTGCAGCTTTATTGAACGCAGCAGCCAAGTACTCCGCAAG GCTTGGTTCGGAACTGAACATGACATGAGCAGCAGATGAACCCTCCTTTTTTGTGCTTACTGACTTTGAAGTTCAGGATT TTGAATTCTCAGGTGTAGGTGCAATGTAAAAAGAAGCAGTCACTGCATTCCATACTACAGGCTTCAAAAACTTCCATGGA TCTTCAATCATGGAACTCTTGTAAAATTGTTCTGGGCCACTAGACCTGTCCTCGTTGGACCAGTGACCACGAGAACTCCG TCCTTGTCCACTACCCCTTCCTGAAACATGACTTCTGGTGTTCTGCCAGAAGCCCCTACCTCACCCTCGACTAGGACTTG GATAAGTACCACCACCTGATGGACGGAATGGTAAGTTATAGGGAGCAGGGCCTCTAGGTCCATTCCAAACCGGGTTTCTG TAGGCTGCTGGCAATACTTGACTTGGAGAAGGGGTCATCTACGGATTTGTTGATCCTGT
CDS sequence (LotjaGi6g1v0240300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGAACCAAAATTGAATATTCCATAAATCCTCTAGCATACTCAGTAGACTGCAAAAACTTCACTGTTGATGGTGTGGA TGTTTGGGAGCATAATCTGAAGAAAGAACTTGCTTATAACAACAACCAGTGCAGTATTGGGATGGATAAATTGCAAGTTT CCATGGATAAGATGCTTGACAGAAACAATATAGAGTCCATCAAAAAGACCATGCAGATGCATGAGGAAATCTTCAAACAC CAGGTAAGGGAACTACACCGGGTATACAGTGTACAAAAGATGCTGATGGGTGAGCTCAAACAACATAAATTTTGGACCTC CATGAACAACATAGGTACAAACAATCCATATGTGGTTAAACAACAACAACAGCAAACAACACAAATTTCATATGGTACTG ATTTCCATGTTGGAAGTTTGAGAGAGGATCTACATGTAAAGGAAGGGAGTGGAAGTTGTTCTGGAGAGAGGAACATAAAA AGGCAAAGAGATTTTGATCTTGAAAGGCCTGCTGCTGAGAGAGACATTTTTGCAAGAGGCTGTGATGAAGGTGAGGCAGG ACCAAGCTCCTACACTGCATTTCAGAGTTGCAAAATAAGCAATGATGATGAAGACATGGAAGTGGATTTGAGTTTAAGTA TAGGAGGAAGGAGCAGCCATGTTAAGAAGAAAAAACCTTATCTGCTTCCATTGGGATTCTCAGGCTCATCACCCATAGGG AAAACTAGGGAGTTCAATTCTTCTATCTCTTTTCAATCAGATAATAAAGTGGGAGATTGCAGTGACCCCACCACCCCCAT GAGCAGCTCCAGTGTTACATTTGATCAAGAAAAAAGGGGGCCACATTGGCTTTCTCAAGGCTTAAAGCTTAAATAG
Protein sequence (LotjaGi6g1v0240300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGTKIEYSINPLAYSVDCKNFTVDGVDVWEHNLKKELAYNNNQCSIGMDKLQVSMDKMLDRNNIESIKKTMQMHEEIFKH QVRELHRVYSVQKMLMGELKQHKFWTSMNNIGTNNPYVVKQQQQQTTQISYGTDFHVGSLREDLHVKEGSGSCSGERNIK RQRDFDLERPAAERDIFARGCDEGEAGPSSYTAFQSCKISNDDEDMEVDLSLSIGGRSSHVKKKKPYLLPLGFSGSSPIG KTREFNSSISFQSDNKVGDCSDPTTPMSSSSVTFDQEKRGPHWLSQGLKLK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 38 | 291 | 254 | 1.0E-110 | – | |
| PANTHER | 38 | 291 | 254 | 1.0E-110 | – | |
| MobiDBLite | 246 | 276 | 31 | - | – | |
| MobiDBLite | 246 | 291 | 46 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi6g1v0240300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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