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LotjaGi6g1v0244000.1

Overview

Field Value
Gene ID LotjaGi6g1v0244000
Transcript ID LotjaGi6g1v0244000.1
Related isoforms 2
Lotus japonicus genome version Gifu v1.2
Description Methyltransferase-like protein 13; TAIR: AT3G17365.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; Swiss-Prot: sp|Q8N6R0|MET13_HUMAN Methyltransferase-like protein 13; TrEMBL-Plants: tr|I3T085|I3T085_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0244000
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr6:55679326..55684395) extracted from Lotus japonicus Gifu genome v1.2.

ATATTTTATTAATGCACCATGCCACGTGTAATGCAACAGATGCTACTTTTCTTTTCTTCCAACTTCTGAATCTGATTTTC CCTGTTGAGATTTGAAACAAAACAAACTTGAGACACAACATATATTCATAGTCCTCAGGAATTACAATCATAGATTGATA CATATCCAACACAAACACCAACATACAAGTTGAATTGAAGGGAAGAAGAAGACAGTGATGGCAACAGGTACCCAAGCCTA CGGTGAATCATGGTACTGGGACAACCGCTACACCAACGAACCTGGTCCCTTTGATTGGTACCAAAAGTACATCACTTTGG CTCCAATCATCAACCTCTATGTCCCTCAAAACCACTCCATCCTCGTTGTCGGTTCTGGCAACTCAGGCATGTTTTGTTGA TCTCTCAGATCTCTATATGCAATTCAATCACAACCCCACCTACCCATTTTGCTTTGATTCAATAAAAATAAAATTTTTAT GCTTTTTATAATCTTTTTCTTTGGTTGGTTCCTATATTCCATGACCCTTTTGTGAAATGTGTGTTTGTCAATATCAAGTT TTGTGTTGTTTGCAGCTTTCAGTGAAGGGTTGGTTGATGAGGGTGGTTACTCAGATGTTGTCAATGTTGATATATCTTCT GTTGTCATTGAAGCTATGCAGAATAAATACAAAGATCGTCCTCAATTGAAGTGTATCCTTTTGATATATTCATGTTATAA TGTCATGGTTTTCATTTTGTGGGTGTAACTTGTAATTATGGAACCATGAAACTATTGATTTTTTTGGTATTATGTTATTG AGGGAGTGAACTATCCTTAATCAATAGGCAGATGTGAAAATGGATGTCAGAGACATGAGTGCTTTTGAATCAGGATCTTT TGGTTCTGTTATTGACAAAGGTGTGCTTATTTTTCATAGATTTTGATTTCTCTATTTTGTAATAATTATAGTATCTATTG GGCAATGAATTCTGATGATACTGTTTGATTTTTTTTTTCAGGGACTCTTGACTCTATCTTGGTGAGTGATGATGCTCATT CAAATACTTGTATGTTTAACAAGACTTACTGTGTTACAGGTTGCTCATTGCATATATTTTGTTTGTAGTGTGGAAGTAAT TCAAGACAAAATGCTACTGAGATGCTTGAGGAAGTTTGGAGGTAAAATAAAACCATGAACAGAAGTCTATAGTTATTTAC GCTTCTGTTTTGTTTAGGATCTTTTTTATTCTTGATCTGTTCACCATTATTGAAGCAGTTGATGACACACTATAGGGTCC TTAAGGATAAAGGAGTCTATATTCTGGTAATTGCACTTCATTCTCTTAGTTTTACTATCAATCTGCATTGAGATTTGCTC TCCAATAAAGGAAACTTGTCTTGGAATTTCACTTGATCAGCCTTGATTACCGCAGGTGACATATGGAGCTCCGCTATATC GCCTGCGCTTGCTAAAGGAATCATGCTCTTGGTCAATAAAACTCCATGTGATAGGTTGGCTAAATTCTAATGTCGATGTC AATTTGTATGCCATGTTTTATGAAGCTATTACAATTATGATGTTCTCTCATGCATATTTCCAGGTTTTTAGTTTTTGCCT GATTTCCAGTTCTGTCATTTACTTTTGGGATTAAGAAAGTCTCATATAACAAATAAGTTGGAATACACCTGAACTCCGTA TTAGCAGTGCTTGTAAACTAAAATGGATTATTGTTGTGGGAATTGGGGATTGCTGAATATATGGTTCCTGCCTTGCTGGT TAGATGTATGAGGCACCATCATGTGGCTTTAGATATTATCAAATTATCCAACAGCTTAAGTTGTTAGGTGAAAACAATAT GCCAGACGATACAGATACCCATTTATCTTGTGTTCAAATTCAACTTTTTTAAAGCCACTATCTCAAAAGCTTTGATATCA TGTCATGAACTTTAGACCAACAATCCCAAAAGCTTTAGACTACTTGGTCATAGAGGTTATGATACCATGTTATAAATCAA TTATTTCAAAAGTTTAAACTATTGAGTGAAAACACATGGATAACTTTTGTATTATAGCTTTATTTAACAATATGCTAGAC AATGCACAAACCTATTTACCTTGTGTTGAAATTCAACTTTTTATCAAACCACTCTCTGAGAAGCTTTGATATTATGTCAT AAACTTTAGACCAAGTATCCCCAAAGCTTTAGATTACTTGGCCATAGAGGTTGTGATCAATGTTGTCAGGATCGAGATCG TACTCAGGATCGGAAAAGGGGGGTGAAAGATTGTAGATCGTAGGATCGGGATCAGATCATAAGATCCTACTAGAAATGCA AAAACATACTTAATTAAATAACATATATAGAAAATTCCATAAATGATGAAAATAACCTGATTCACATGAACTTAGACTAG AAAGAGGGCTAAACAGCCGCACGCGATGATCGATGGCAGAGGTCAGGCGTGGAGGTCGATGGGGAAGAAGATGGGAAGCA GTCATGGAGTTTAAAAGTTTGAGCGGGTCTCTCTTTTGGGGCTGAAACCCAGAAGCTCATTTCCAAAACCCTGGTCCTTG AATCGGATCGGGATCTTGATCTTACTATCCTGTCCACAAAGATTGGGGTCCTGGACAGATCATGCTCCCATGAGATCCTA TGTGGGGTCCAGATCGTAAAGCACCAGAAAGATCGCAAGATTGTGGGATCCTAAGATCCGGATCAGGATCTTGACAACAC TGGTTATGATACCATGTTATGTATATTTAAAATAAAGGGAAGAGCTGAATATTATTTTCCAATGTTTCAAAACAATATAC AAGGTCTAGGAGATGCGATGCTTGCTATGTTAGTTGATGGTGCAAACAAGCAAATTTTCAGTGGTAGGTGGTGGTGGCTG AGTGCGATGGACGGTGCGATTAATACACAAATCAAGATATGTATCAGCAGGAATGAAGGCTGCTGTAGGAAGCTGCAATG AAAACAGCCTCTGGTGTCGGCAATGAAGGCGGCTAGGTTTGACACAGAAGCAGAGTCTCCCAGATTGGAGCTTTGATAAG AAGTTCAAATAAAGGGAAGAAAACTGAATATTATTTTCTGAATCTTTCTTAACTAAACATGGTAAAAATCTGTGCAAATC AAAATAAACCAAATATGCCCTAAAAATAAAATTATACTAGTTACAGTATATTATACAACATGAGTCCATTATCCCAAAAG TTTAAACCCTTAACTGAAGACACATGAATGGTTTTTATACTGTGGCTTTAGCAATATGTACTTTTTTTTTTTAAATGTCC CCCCTTAAAGCATCCTATTTAACTGTTCCTTTATAAATTGTTAATTTGCTACTCTTTAATTGGGTATATATGCATTTTTA GCATTCAAATTTGGATTTTTTTTATAAGCCCTCGTCAATAACAGTTGGCATGCTATATTCAGAAAAACTTGCATCAGAAG AGAAATCTGATCATCCACTTTGGGAGCTGACAAAACCTGTTCCGCTGAATGACGATGGTAGCTCTGTGGAGGAAGCCCTT GGCCGGAATGCTGATGTCCATTACATATATATATGCACTAAGGTAATCGTATGTTTTGTGGTACCTATTGCTATATGTCC TTGGTCAATAGTACATGTTATAATATACCTCTCTCTTGAATAATTAATCGTCATGTTGTCAAAATCATATGCCTAGGTGA TGTTGAGTGTAGCTTTCTATACCCTTTTCCCATTTGGACTAATCATTTTTATTATGATTTTTCTGCCAGGAAAGTTCTGC TAACGAACATTAAAGCATGAGCGGGCAATTTGGCGAGGAAGGCACCCATTTTCACTCTAGAAGTTTCTGTTACTACTTAC TGTAGTTGATCCTAGCATCCGTAATGGTAAATCCAAAGTTAATGAGCTTAATTTTCTTTGCAACACAATGTATTATGATA TTCTGAACGTTTGTGTGATCTAAAGACAGTAACATTTCTTCAATTTTTAATTTGATTGATTCCAAGAGTTGTCTGTTAAC TCCGCCATTTTCTGCCATTTATAATGTCACAATATATTTTCTTCAGGAATCTCCAGAATTGTAATATTTAACCTTTTGTG ATTATTCTCTTCTGCTTTAAGCTTTTCAAGATGTCTTTTTCTTTGAGTATAGAGAAGATGAGGGAAAGAATGAATTCTCA TTAGTTTTGAATGTACAAGTGCAGGTCTATATACATGTTGTTGACTTGTATGAAATTGCAACTGAATACAATTGACTCAC TAATCTATCAAGATGATGCAAATAACTTGACTAACTTGAACTCAATATTGGGAAGTATAGGTCTTTGGTTCTCCACATGT AGAATGGAAATTTGATCTATGCAGAGGAGTTTTGTGAGGATGTCTGCTAGAGGGTGATGAGTATTAACATGAATGAGCTT TGGTGAACCAACTTGTACCTTGGATAAAATGACAATCAACTTTTTAGTTAATGATCTTTCTTTTATTTGATTTTTCATCT CTTATGCTAATATTATATCAGCATTTATGGTTTACTAGATGATAAAAATGCATTACGGCAAGTTTAAGTTAACAAGTTTG ATAATGAGTTTAGAATAGGTATCTAGTGTCAAAGAGTGAGAATACGAGTATTTAAGTTGCTACTCGCGTAAATATCAAAT GAAGTTGTGGGGATGGGGACACACACTATGTACGTTACTCGATCCCACTCATCCTCATCTCTACCGACACTCGACGCCTT CCACCACGCTATTTGGTACCCTCTAGGATCACTGCCTTAGCACCTAACTCGTCTCCCTCCACCATCATGTATGGGCACCA ACCACCACTGGCATTCAATACTCTCCACTACCACCACCCCTCAACCCAACTAATGTCCTCATTGTCAAATATCCTTTACC ATCATTGGCACCCAGCAACCTCCACCACTGCCATCCAACACATCTACTTTCTTCAATTGAAAAAATTGAATTATTATTAC CATAGAAAATATTGAGCAAGTATAGCTATTACTGGATCTGGATTCAGAATCAATCCCATTCCTTCCCATCCATATATCTT ACACATGCAATTTCTTAAAGTTTTCCTCAC
Download Genomic Sequence

CDS sequence (LotjaGi6g1v0244000.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGCAGAATAAATACAAAGATCGTCCTCAATTGAAGTATGTGAAAATGGATGTCAGAGACATGAGTGCTTTTGAATCAGG ATCTTTTGGTTCTGTTATTGACAAAGGGACTCTTGACTCTATCTTGTGTGGAAGTAATTCAAGACAAAATGCTACTGAGA TGCTTGAGGAAGTTTGGAGGGTCCTTAAGGATAAAGGAGTCTATATTCTGGTGACATATGGAGCTCCGCTATATCGCCTG CGCTTGCTAAAGGAATCATGCTCTTGGTCAATAAAACTCCATGTGATAGAAAAACTTGCATCAGAAGAGAAATCTGATCA TCCACTTTGGGAGCTGACAAAACCTGTTCCGCTGAATGACGATGGTAGCTCTGTGGAGGAAGCCCTTGGCCGGAATGCTG ATGTCCATTACATATATATATGCACTAAGGAAAGTTCTGCTAACGAACATTAA
Download CDS Sequence

Protein sequence (LotjaGi6g1v0244000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MQNKYKDRPQLKYVKMDVRDMSAFESGSFGSVIDKGTLDSILCGSNSRQNATEMLEEVWRVLKDKGVYILVTYGAPLYRL RLLKESCSWSIKLHVIEKLASEEKSDHPLWELTKPVPLNDDGSSVEEALGRNADVHYIYICTKESSANEH
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR12176:SF14
1 146 146 2.0E-51 –
Gene3D
G3DSA:3.40.50.150
1 149 149 1.1E-23 –
PANTHER
PTHR12176
1 146 146 2.0E-51 –
Pfam
PF08241
4 69 66 8.7E-6
IPR013216
SUPERFAMILY
SSF53335
9 80 72 1.67E-9
IPR029063

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0008168
Molecular function Methyltransferase activity Catalysis of the transfer of a methyl group to an acceptor molecule.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi6g1v0244000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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