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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0244000 |
| Transcript ID | LotjaGi6g1v0244000.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Methyltransferase-like protein 13; TAIR: AT3G17365.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; Swiss-Prot: sp|Q8N6R0|MET13_HUMAN Methyltransferase-like protein 13; TrEMBL-Plants: tr|I3T085|I3T085_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0244000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:55679353..55683583) extracted from Lotus japonicus Gifu genome v1.2.
GTAATGCAACAGATGCTACTTTTCTTTTCTTCCAACTTCTGAATCTGATTTTCCCTGTTGAGATTTGAAACAAAACAAAC TTGAGACACAACATATATTCATAGTCCTCAGGAATTACAATCATAGATTGATACATATCCAACACAAACACCAACATACA AGTTGAATTGAAGGGAAGAAGAAGACAGTGATGGCAACAGGTACCCAAGCCTACGGTGAATCATGGTACTGGGACAACCG CTACACCAACGAACCTGGTCCCTTTGATTGGTACCAAAAGTACATCACTTTGGCTCCAATCATCAACCTCTATGTCCCTC AAAACCACTCCATCCTCGTTGTCGGTTCTGGCAACTCAGGCATGTTTTGTTGATCTCTCAGATCTCTATATGCAATTCAA TCACAACCCCACCTACCCATTTTGCTTTGATTCAATAAAAATAAAATTTTTATGCTTTTTATAATCTTTTTCTTTGGTTG GTTCCTATATTCCATGACCCTTTTGTGAAATGTGTGTTTGTCAATATCAAGTTTTGTGTTGTTTGCAGCTTTCAGTGAAG GGTTGGTTGATGAGGGTGGTTACTCAGATGTTGTCAATGTTGATATATCTTCTGTTGTCATTGAAGCTATGCAGAATAAA TACAAAGATCGTCCTCAATTGAAGTGTATCCTTTTGATATATTCATGTTATAATGTCATGGTTTTCATTTTGTGGGTGTA ACTTGTAATTATGGAACCATGAAACTATTGATTTTTTTGGTATTATGTTATTGAGGGAGTGAACTATCCTTAATCAATAG GCAGATGTGAAAATGGATGTCAGAGACATGAGTGCTTTTGAATCAGGATCTTTTGGTTCTGTTATTGACAAAGGTGTGCT TATTTTTCATAGATTTTGATTTCTCTATTTTGTAATAATTATAGTATCTATTGGGCAATGAATTCTGATGATACTGTTTG ATTTTTTTTTTCAGGGACTCTTGACTCTATCTTGGTGAGTGATGATGCTCATTCAAATACTTGTATGTTTAACAAGACTT ACTGTGTTACAGGTTGCTCATTGCATATATTTTGTTTGTAGTGTGGAAGTAATTCAAGACAAAATGCTACTGAGATGCTT GAGGAAGTTTGGAGGTAAAATAAAACCATGAACAGAAGTCTATAGTTATTTACGCTTCTGTTTTGTTTAGGATCTTTTTT ATTCTTGATCTGTTCACCATTATTGAAGCAGTTGATGACACACTATAGGGTCCTTAAGGATAAAGGAGTCTATATTCTGG TAATTGCACTTCATTCTCTTAGTTTTACTATCAATCTGCATTGAGATTTGCTCTCCAATAAAGGAAACTTGTCTTGGAAT TTCACTTGATCAGCCTTGATTACCGCAGGTGACATATGGAGCTCCGCTATATCGCCTGCGCTTGCTAAAGGAATCATGCT CTTGGTCAATAAAACTCCATGTGATAGGTTGGCTAAATTCTAATGTCGATGTCAATTTGTATGCCATGTTTTATGAAGCT ATTACAATTATGATGTTCTCTCATGCATATTTCCAGGTTTTTAGTTTTTGCCTGATTTCCAGTTCTGTCATTTACTTTTG GGATTAAGAAAGTCTCATATAACAAATAAGTTGGAATACACCTGAACTCCGTATTAGCAGTGCTTGTAAACTAAAATGGA TTATTGTTGTGGGAATTGGGGATTGCTGAATATATGGTTCCTGCCTTGCTGGTTAGATGTATGAGGCACCATCATGTGGC TTTAGATATTATCAAATTATCCAACAGCTTAAGTTGTTAGGTGAAAACAATATGCCAGACGATACAGATACCCATTTATC TTGTGTTCAAATTCAACTTTTTTAAAGCCACTATCTCAAAAGCTTTGATATCATGTCATGAACTTTAGACCAACAATCCC AAAAGCTTTAGACTACTTGGTCATAGAGGTTATGATACCATGTTATAAATCAATTATTTCAAAAGTTTAAACTATTGAGT GAAAACACATGGATAACTTTTGTATTATAGCTTTATTTAACAATATGCTAGACAATGCACAAACCTATTTACCTTGTGTT GAAATTCAACTTTTTATCAAACCACTCTCTGAGAAGCTTTGATATTATGTCATAAACTTTAGACCAAGTATCCCCAAAGC TTTAGATTACTTGGCCATAGAGGTTGTGATCAATGTTGTCAGGATCGAGATCGTACTCAGGATCGGAAAAGGGGGGTGAA AGATTGTAGATCGTAGGATCGGGATCAGATCATAAGATCCTACTAGAAATGCAAAAACATACTTAATTAAATAACATATA TAGAAAATTCCATAAATGATGAAAATAACCTGATTCACATGAACTTAGACTAGAAAGAGGGCTAAACAGCCGCACGCGAT GATCGATGGCAGAGGTCAGGCGTGGAGGTCGATGGGGAAGAAGATGGGAAGCAGTCATGGAGTTTAAAAGTTTGAGCGGG TCTCTCTTTTGGGGCTGAAACCCAGAAGCTCATTTCCAAAACCCTGGTCCTTGAATCGGATCGGGATCTTGATCTTACTA TCCTGTCCACAAAGATTGGGGTCCTGGACAGATCATGCTCCCATGAGATCCTATGTGGGGTCCAGATCGTAAAGCACCAG AAAGATCGCAAGATTGTGGGATCCTAAGATCCGGATCAGGATCTTGACAACACTGGTTATGATACCATGTTATGTATATT TAAAATAAAGGGAAGAGCTGAATATTATTTTCCAATGTTTCAAAACAATATACAAGGTCTAGGAGATGCGATGCTTGCTA TGTTAGTTGATGGTGCAAACAAGCAAATTTTCAGTGGTAGGTGGTGGTGGCTGAGTGCGATGGACGGTGCGATTAATACA CAAATCAAGATATGTATCAGCAGGAATGAAGGCTGCTGTAGGAAGCTGCAATGAAAACAGCCTCTGGTGTCGGCAATGAA GGCGGCTAGGTTTGACACAGAAGCAGAGTCTCCCAGATTGGAGCTTTGATAAGAAGTTCAAATAAAGGGAAGAAAACTGA ATATTATTTTCTGAATCTTTCTTAACTAAACATGGTAAAAATCTGTGCAAATCAAAATAAACCAAATATGCCCTAAAAAT AAAATTATACTAGTTACAGTATATTATACAACATGAGTCCATTATCCCAAAAGTTTAAACCCTTAACTGAAGACACATGA ATGGTTTTTATACTGTGGCTTTAGCAATATGTACTTTTTTTTTTTAAATGTCCCCCCTTAAAGCATCCTATTTAACTGTT CCTTTATAAATTGTTAATTTGCTACTCTTTAATTGGGTATATATGCATTTTTAGCATTCAAATTTGGATTTTTTTTATAA GCCCTCGTCAATAACAGTTGGCATGCTATATTCAGAAAAACTTGCATCAGAAGAGAAATCTGATCATCCACTTTGGGAGC TGACAAAACCTGTTCCGCTGAATGACGATGGTAGCTCTGTGGAGGAAGCCCTTGGCCGGAATGCTGATGTCCATTACATA TATATATGCACTAAGGTAATCGTATGTTTTGTGGTACCTATTGCTATATGTCCTTGGTCAATAGTACATGTTATAATATA CCTCTCTCTTGAATAATTAATCGTCATGTTGTCAAAATCATATGCCTAGGTGATGTTGAGTGTAGCTTTCTATACCCTTT TCCCATTTGGACTAATCATTTTTATTATGATTTTTCTGCCAGGAAAGTTCTGCTAACGAACATTAAAGCATGAGCGGGCA ATTTGGCGAGGAAGGCACCCATTTTCACTCTAGAAGTTTCTGTTACTACTTACTGTAGTTGATCCTAGCATCCGTAATGG TAAATCCAAAGTTAATGAGCTTAATTTTCTTTGCAACACAATGTATTATGATATTCTGAACGTTTGTGTGATCTAAAGAC AGTAACATTTCTTCAATTTTTAATTTGATTGATTCCAAGAGTTGTCTGTTAACTCCGCCATTTTCTGCCATTTATAATGT CACAATATATTTTCTTCAGGAATCTCCAGAATTGTAATATTTAACCTTTTGTGATTATTCTCTTCTGCTTTAAGCTTTTC AAGATGTCTTTTTCTTTGAGTATAGAGAAGATGAGGGAAAGAATGAATTCTCATTAGTTTTGAATGTACAAGTGCAGGTC TATATACATGTTGTTGACTTGTATGAAATTGCAACTGAATACAATTGACTCACTAATCTATCAAGATGATG
CDS sequence (LotjaGi6g1v0244000.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCAACAGGTACCCAAGCCTACGGTGAATCATGGTACTGGGACAACCGCTACACCAACGAACCTGGTCCCTTTGATTG GTACCAAAAGTACATCACTTTGGCTCCAATCATCAACCTCTATGTCCCTCAAAACCACTCCATCCTCGTTGTCGGTTCTG GCAACTCAGCTTTCAGTGAAGGGTTGGTTGATGAGGGTGGTTACTCAGATGTTGTCAATGTTGATATATCTTCTGTTGTC ATTGAAGCTATGCAGAATAAATACAAAGATCGTCCTCAATTGAAGTATGTGAAAATGGATGTCAGAGACATGAGTGCTTT TGAATCAGGATCTTTTGGTTCTGTTATTGACAAAGGGACTCTTGACTCTATCTTGTGTGGAAGTAATTCAAGACAAAATG CTACTGAGATGCTTGAGGAAGTTTGGAGGGTCCTTAAGGATAAAGGAGTCTATATTCTGGTGACATATGGAGCTCCGCTA TATCGCCTGCGCTTGCTAAAGGAATCATGCTCTTGGTCAATAAAACTCCATGTGATAGAAAAACTTGCATCAGAAGAGAA ATCTGATCATCCACTTTGGGAGCTGACAAAACCTGTTCCGCTGAATGACGATGGTAGCTCTGTGGAGGAAGCCCTTGGCC GGAATGCTGATGTCCATTACATATATATATGCACTAAGGAAAGTTCTGCTAACGAACATTAA
Protein sequence (LotjaGi6g1v0244000.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MATGTQAYGESWYWDNRYTNEPGPFDWYQKYITLAPIINLYVPQNHSILVVGSGNSAFSEGLVDEGGYSDVVNVDISSVV IEAMQNKYKDRPQLKYVKMDVRDMSAFESGSFGSVIDKGTLDSILCGSNSRQNATEMLEEVWRVLKDKGVYILVTYGAPL YRLRLLKESCSWSIKLHVIEKLASEEKSDHPLWELTKPVPLNDDGSSVEEALGRNADVHYIYICTKESSANEH
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 4 | 229 | 226 | 4.0E-86 | – | |
| PANTHER | 4 | 229 | 226 | 4.0E-86 | – | |
| Gene3D | 6 | 232 | 227 | 2.0E-50 | – | |
| SUPERFAMILY | 8 | 168 | 161 | 5.01E-26 | ||
| CDD | 48 | 156 | 109 | 2.7921E-8 | – | |
| Pfam | 49 | 152 | 104 | 4.2E-13 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Methyltransferase activity | Catalysis of the transfer of a methyl group to an acceptor molecule. |
Expression pattern of LotjaGi6g1v0244000.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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