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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0253800 |
| Transcript ID | LotjaGi6g1v0253800.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Major allergen Mal d 1 family protein; TAIR: AT1G24020.1 MLP-like protein 423; Swiss-Prot: sp|P17642|PRS2_SOLTU Pathogenesis-related protein STH-2; TrEMBL-Plants: tr|I3SYM3|I3SYM3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0253800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:56599518..56601112) extracted from Lotus japonicus Gifu genome v1.2.
AAATAAAAAATTCCAATCCTTAACTACCAAAGAAATGTTCATTTCTTCTAGCCGCAATAATCAAATTTTCAGTTTATATC AAAAGGGGTCATTCCTACGAAACCTACTTCATAGGACATAGCTATAAAATAATAAAGTGCTCGATCATTTCTGCAACACA ACTCAGGATATCCAACAACACTTGCAATAACCTTGATTTTTGGTGATCATTTCTGCAATCTATACACAACTCATAACATG GGTGTCACAACTTTCACACATGATTTTTCCACCCCTGTTGCTCCATCACGCATGTTTAAGGCCTTGATCACAGACTCCAG AGCTTTGCTTCCAAAGCTCTTGCCACAGTTTATAAAAGATGTCACCTTAATCCAAGGAAATGGAGAAGCTGGAAGCATTG AGCAAATTAACTTTGCTGAAGGTTAGCAAAAAAAAACTGACATCCTTAACTTAAATAGCTTCTTTTTTTTTCCCTCCTCT ATATTGCTTTAATAACTTTTTGATTTTGTTTAGTGTGGACCAAGAAAAATTTGGTTCACAAGTTAATAAGGTTTCTCTGC AAATTAATTTTAGCACATAACGGACATATTGTAAATAGCATGTACTAAATGTTAGTTGTAAAAACATGGTTCATGGGCCG TAGAATTGCAATAACTTGTTACATGTTTGATGTTTCTTTTATGCAGGCTCCCCCTTCAAATATTTGAAACACAGAATTGA GATGGTTGATAACAATAACTTGCTGTGCAACTACACTATGATTGAAGGGGATCCATTGGGAGACAAGCTTGAGTCTATAG CTTATGAGGTTAAGTTTGAGGCCACTAGTGATGGAGGTTCCCACTGTGAAATGACAAGCAAATACAATACCATTGGGGGG TATGAAGTCAGAGAGGAAGAGATAAAGGAAGGAAATGAAAGCTCCATTGGAATCTGTAAAGTTGTGGAAAAGTACCTGCT GGAGAATCCACAAGTCTATGCTTAATTATTCATTTGTTTTTGTCAAGTGTGCTGATTTTTTTATTAAAGATGAAATACAA ATTTTATTCAATTTTTGAATAACAGTGTGACCCCAAATTCAGGGGCACTTGGAATGTAAAAAGTATTGAATTCATTAATA AGTCCTTAGCCTTCAAGGACATATATACTTTATGTGGTTTGCTAAAATATTTGTACTCTTGTATATTGTATAAGTAAGAG TTGGAGATTCATAGCTGTATTGGAGAGTGAAGCCATGCTTAATATAATTTTGTTATGCTTCACAGCTGGTTTGGACATTG AAGTGTGGACCACCAATGATAAGTTGATAACTTTGTCTGCATTTGAGATTTCATTTTTCATTCTTTTGTTCTTTTGGATT TTAGATACCTTGCAATAAAAATCATATAAAAGCATGGCCACCCAAATGCATGCAAAGCCAGCTTGTAAAAATATTCCTCA TGATAAAGTTCAGATCTTGTTCTTGACCTAAAAAAGAAAAATTTGAGATCTTGTCACTTCTTTCTCACTTTCTGTAGAGG TGCACCACGTTTCGATCCAAAAGGGACCGAGGGTGATACACTGAAAAATTTATGGTAATAAGAATTATTTTATGC
CDS sequence (LotjaGi6g1v0253800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGTGTCACAACTTTCACACATGATTTTTCCACCCCTGTTGCTCCATCACGCATGTTTAAGGCCTTGATCACAGACTC CAGAGCTTTGCTTCCAAAGCTCTTGCCACAGTTTATAAAAGATGTCACCTTAATCCAAGGAAATGGAGAAGCTGGAAGCA TTGAGCAAATTAACTTTGCTGAAGGCTCCCCCTTCAAATATTTGAAACACAGAATTGAGATGGTTGATAACAATAACTTG CTGTGCAACTACACTATGATTGAAGGGGATCCATTGGGAGACAAGCTTGAGTCTATAGCTTATGAGGTTAAGTTTGAGGC CACTAGTGATGGAGGTTCCCACTGTGAAATGACAAGCAAATACAATACCATTGGGGGGTATGAAGTCAGAGAGGAAGAGA TAAAGGAAGGAAATGAAAGCTCCATTGGAATCTGTAAAGTTGTGGAAAAGTACCTGCTGGAGAATCCACAAGTCTATGCT TAA
Protein sequence (LotjaGi6g1v0253800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGVTTFTHDFSTPVAPSRMFKALITDSRALLPKLLPQFIKDVTLIQGNGEAGSIEQINFAEGSPFKYLKHRIEMVDNNNL LCNYTMIEGDPLGDKLESIAYEVKFEATSDGGSHCEMTSKYNTIGGYEVREEEIKEGNESSIGICKVVEKYLLENPQVYA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 160 | 160 | 2.2E-86 | – | |
| PANTHER | 1 | 160 | 160 | 2.2E-86 | – | |
| Pfam | 1 | 154 | 154 | 1.3E-24 | ||
| Gene3D | 1 | 160 | 160 | 9.6E-58 | ||
| SUPERFAMILY | 2 | 159 | 158 | 3.21E-39 | – | |
| PRINTS | 3 | 23 | 21 | 1.4E-28 | ||
| CDD | 5 | 152 | 148 | 8.33902E-57 | – | |
| PRINTS | 26 | 36 | 11 | 1.4E-28 | ||
| PRINTS | 50 | 59 | 10 | 1.4E-28 | ||
| PRINTS | 66 | 85 | 20 | 1.4E-28 | ||
| PRINTS | 85 | 98 | 14 | 1.4E-28 | ||
| PRINTS | 110 | 126 | 17 | 1.4E-28 | ||
| PRINTS | 144 | 154 | 11 | 1.4E-28 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein phosphatase inhibitor activity | Stops, prevents or reduces the activity of a protein phosphatase, an enzyme that hydrolyzes phosphate groups from phosphorylated proteins. | ||
| Biological process | Defense response | Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack. | ||
| Biological process | Abscisic acid-activated signaling pathway | A series of molecular signals generated by the binding of the plant hormone abscisic acid (ABA) to a receptor, and ending with modulation of a cellular process, e.g. transcription. | ||
| Molecular function | Abscisic acid binding | Interacting selectively and non-covalently with abscisic acid, plant hormones that regulate aspects of plant growth. | ||
| Molecular function | Signaling receptor activity | Receiving a signal and transmitting it in the cell to initiate a change in cell activity. A signal is a physical entity or change in state that is used to transfer information in order to trigger a response. |
Expression pattern of LotjaGi6g1v0253800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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